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1.
Johannes Dambach Michael J. Raupach Florian Leese Julia Schwarzer Jan O. Engler 《Marine Ecology》2016,37(6):1336-1344
The coherency among larval stages of marine taxa, ocean currents and population connectivity is still subject to discussion. A common view is that organisms with pelagic larval stages have higher dispersal abilities and therefore show a relatively homogeneous population genetic structure. Contrary to this, local genetic differentiation is assumed for many benthic direct developers. Specific larval or adult migratory behavior and hydrographic effects may significantly influence distribution patterns, rather than passive drifting abilities alone. The Southern Ocean is an ideal environment to test for the effects of ocean currents on population connectivity as it is characterized by several well‐defined and strong isolating current systems. In this study we studied the genetic structure of the decapod deep‐sea shrimp Nematocarcinus lanceopes, which has planktotrophic larval stages. We analysed 194 individuals from different sample localities around the Antarctic continent using nine microsatellite markers. Consistent with a previous study based on mitochondrial DNA markers, primarily weak genetic patterns among N. lanceopes populations around the continent were found. Using ocean resistance modeling approaches we were able to show that subtle genetic differences among populations are more likely explained by ocean currents rather than by geographic distance for the Atlantic Sector of the Southern Ocean. 相似文献
2.
Marine organisms with a pelagic stage are often assumed to display minor population structure given their extended larval development and subsequent high long‐distance dispersal ability. Nonetheless, considerable population structure might still occur in species with high dispersal ability due to current oceanographic and/or historical processes. Specifically, for the wider Caribbean and Gulf of Mexico, theoretical and empirical considerations suggest that populations inhabiting each of the following areas should be genetically distinct: Panama, Belize, Southwest Florida (Tampa), and Southeast Florida (Fort Pierce). This study tests the hypothesis of significant genetic differentiation in Palaemon floridanus populations across the wider Caribbean and Gulf of Mexico. Population level comparisons were conducted using sequences of the mtDNA COI. In agreement with predictions, AMOVA and pairwise FST values demonstrated population differentiation among most pairs of the studied populations. Only Panama and East Florida populations were genetically similar. An isolation‐with‐migration population divergence model (implemented in IMA2) indicated that population divergence with incomplete lineage sorting can be invoked as the single mechanism explaining genetic dissimilarity between populations from the east and west coast of Florida. Historical demographic analyses indicated demographic expansion of P. floridanus in some localities [recent in Panama and ancient in East Florida and the wider Caribbean (entire dataset)] but constant population in other localities (in Belize and West Florida). This study rejects the idea of panmixia in marine species with high long‐distance dispersal ability. Contemporary and historical processes might interact in a complex manner to determine current phylogeographic patterns. 相似文献
3.
Y Qhaji B Jansen van Vuuren I Papadopoulos CD McQuaid 《African Journal of Marine Science》2015,37(3):345-351
The Wild Coast in south-eastern South Africa is strongly influenced by the warm, southward-flowing Agulhas Current. This current has a significant impact on dispersal in the coastal biota of the region, and facilitates high levels of connectivity among populations. However, it is not known how the region's high-velocity hydrology affects genetic population structure in endemic estuarine species, populations of which are frequently isolated from the sea. Here, we compared genetic structure in two estuarine crabs of the family Hymenosomatidae. Both are presumed to have low dispersal potential, but they differ in terms of their life histories. Hymenosoma longicrure has abbreviated larval development and can complete its entire life cycle within estuaries, whereas Neorhynchoplax bovis is a direct developer that lacks planktonic larvae. Using DNA sequence data from the mitochondrial COI gene and the intron of the nuclear ANT gene, we found that levels of genetic structure differ considerably between the species. Depending on the genetic marker used, H. longicrure is genetically homogeneous (COI) or displays low levels of genetic structure and minor evidence of recruitment near natal sites (ANT). In contrast, connectivity in N. bovis is much lower, as this species has a unique combination of alleles at each site, indicating that recruitment is mostly local. These results support previous findings suggesting that even a short larval dispersal phase is sufficient to maintain high levels of connectivity and prevent genetic divergence among populations. 相似文献
4.
As a commercially important fisheries resource in East Asia, the Chinese surf clam Mactra chinensis has experienced severe population declines in the past decades, probably due to over‐exploitation. To provide scientific bases for fisheries management and artificial breeding, we investigated genetic variation and population structure of Mactra chinensis in Northern China using microsatellites. Samples collected from eight localities throughout natural habitats of the species in Northern China were genotyped. Nine microsatellites revealed high allelic diversity with 14–36 alleles per locus. Observed and expected heterozygosity varied from 0.593 to 0.945 and from 0.638 to 0.958, respectively. Pairwise FST values indicated that all population pairs had small but significant genetic differentiation. A Mantel test showed statistically significant correlations between genetic distance and geographical distance, indicating that genetic differentiation of the Chinese surf clam conformed to a pattern of isolation‐by‐distance. Cluster analysis using neighbor‐joining separated the eight populations into three groups. The three areas of low gene flow identified by barrier analysis corresponded with local oceanographic features, suggesting that marine currents and peninsulas play an important role in population structuring of this species. 相似文献
5.
Hierarchical analysis of the population genetic structure in Concholepas concholepas,a marine mollusk with a long‐lived dispersive larva 
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下载免费PDF全文 For most marine invertebrate species, dispersal is achieved mainly or exclusively by pelagic larvae. When the duration of the pelagic larval stage is long, genetic homogeneity over large geographic scales is expected. However, genetic structure has often been reported over small spatial scales, suggesting that more complex processes occur than a simple positive relationship between pelagic larval duration and gene flow. Concholepas concholepas has a larval stage that can last up to 3 months in the water column with a wide distributional range covering from 6°S to 56°S. We used a hierarchical sampling technique to test if the genetic homogeneity of this highly dispersive species is maintained throughout its total geographic range in spite of environmental heterogeneity. In the three studied regions (Antofagasta Bay, Valdivia and Patagonia), a spatial pattern of isolation by distance in conjunction with a spatial genetic structure was observed. Within each region, different spatial genetic patterns were detected. In Antofagasta Bay and Valdivia there was evidence of substantial gene flow among populations, whereas in Patagonia, populations showed genetic structure and a unique, genetically isolated location was identified. These results revealed the existence of spatial differences in the genetic patterns among regions with different coastal topographies in C. concholepas, and give us new insights into the inter‐relationships of larval dispersal potential, actual larval dispersal and physical processes. Regarding the sustainable management of C. concholepas, two important issues are derived from this study: (i) to highlight the need for a regional context in the management of C. concholepas, (ii) to determine the distinctiveness of the most austral population and to focus on the conservation efforts due to the relevance of this area. 相似文献
6.
Larval dispersal is critical for the maintenance of species populations in patchy and ephemeral hydrothermal vent habitats. On fast‐spreading ridges, such as the East Pacific Rise, rates of habitat turnover are comparable to estimated lifespans of many of the inhabiting species. Traditionally, dispersal questions have been addressed with two very different approaches, larval studies and population genetics. Population genetic studies of vent‐endemic species have been informative for determining whether patterns of dispersal are suggestive of stepping stone or island models and estimating rates of gene flow (effective migrants per generation) over broad geographic ranges. However, these studies leave fundamental questions unanswered about the specific mechanisms by which larvae disperse and species maintain their populations and biogeographic ranges. With the goal of examining genetic structure and elucidating alternative larval dispersal mechanisms, we employed a genomic DNA fingerprinting technique, amplified fragment length polymorphisms (AFLPs). To assess the potential utility of AFLPs, and genetic structure of the hydrothermal vent tubeworm Riftia pachyptila, genomic ‘fingerprints’ were recovered from 29 individuals from five vent fields spanning a distance of up to c. 5000 km along the East Pacific Rise. In contrast to previous population genetic studies that found little to no genetic structure using allozymes and mitochondrial DNA, genetic analyses of 630 polymorphic AFLP loci identified distinct subclades within R. pachyptila populations. Significant levels of differentiation were observed among populations from all vent regions as well as within each region. Discrete assemblages of tubeworms separated by as little as c. 400 m within a given vent region were genetically distinguishable and cohorts (based on size‐frequency distribution) within an aggregation were found to be most closely related. These results suggest that mechanisms of larval dispersal act to retain cohort fidelity in R. pachyptila. 相似文献
7.
Population connectivity scales are important tools to achieve a mechanistic understanding of the factors regulating the abundance and distribution of marine populations and therefore support conservation actions to manage fisheries and stocks. We used 10 microsatellites markers on mullets' samples across the Spanish coast to determine the spatial scale of gene flow as well as the origin of post-larvae caught inside two MPAs. Population structure varied from complete homogeneity for Mullus barbatus, to high spatial variability in Mullus surmuletus samples. Differential habitat utilization by species, geomorphological features and oceanographic patterns are discussed as potential causes of patterns observed. Although we were unable to verify the origin of most post-larvae caught inside MPAs we suggest that they may act as genetic reservoirs due to high heterozigosity levels found in adult specimens inside (M. surmuletus) and nearby (both) them. Our results indicate that early life history traits (i.e. larvae) may not be the only determinant on species dispersal capability, suggesting that other mechanisms such as fine scale adult or juvenile movement may have been underestimated as promoting population connectivity. 相似文献
8.
Forcada A Bayle-Sempere JT Valle C Sánchez-Jerez P 《Marine environmental research》2008,66(5):536-547
Marine protected areas (MPAs) could be useful as fisheries management tools for the exportation of pelagic eggs, larvae and adult fish. A decreasing gradient of fish biomass across MPAs boundary may indicate export. We determine whether gradients of decreasing biomass of fish assemblage occurred in Tabarca Marine Reserve over two habitats with different continuity across the boundaries, to test if the patchy nature of the marine environment might act as a barrier for the fish export. In general, significant decreasing gradients in total fish biomass and biomass of some species were observed on P. oceanica and rocky substrates, independently of their different continuity through the reserve boundaries. Changes in the multivariate structure of the fish assemblage were correlated with the distance from integral reserve. All of these results support the hypothesis that the exportation of adult fish from Tabarca Marine Reserve occurs, and this process may influence the surrounding fished areas. 相似文献
9.
P. J. Smith P. J. McMillan B. Bull S. M. McVeagh P. M. Gaffney S. Chow 《新西兰海洋与淡水研究杂志》2013,47(4):737-750
Meristic and genetic methods were used to determine the stock relationships of black Allocytus niger (James, Inada & Nakamura, 1988) and smooth oreo Pseudocyttus maculatus (Gilchrist, 1906) in the New Zealand Exclusive Economic Zone (EEZ). Samples were collected from four management areas—OEO 1 (south‐west), OEO 3A (Chatham Rise west), OEO 4 (Chatham Rise east), and OEO 6 (subantarctic) during the 1998 October‐December spawning period. Lateral line scale counts and pyloric caeca counts revealed differences between black oreo samples from OEO 6 and the other three OEO management areas. Lateral line scale counts in smooth oreo showed no significant differences between areas. Genetic analyses of four non‐coding regions of nuclear DNA and mitochondrial (mt) DNA haplotypes in black oreo showed no significant differentiation among the four management areas. Likewise for smooth oreo, genetic analyses of five non‐coding regions of nuclear DNA and mtDNA haplotypes showed no overall regional differentiation, although there was weak evidence at one locus for a difference between OEO 3A and OEO 6. The data do not reject the null hypothesis of a single genetic stock in New Zealand waters, and are typical of marine species with long pelagic juvenile stages. 相似文献
10.
Fine‐scale phylogeography reveals cryptic biodiversity in Pederson's cleaner shrimp,Ancylomenes pedersoni (Crustacea: Caridea: Palaemonidae), along the Florida Reef Tract 下载免费PDF全文
下载免费PDF全文 Populations of continuously distributed marine organisms that disperse via pelagic larvae are often assumed to exist in a state of genetic panmixia because of their potential ability for long‐distance dispersal. However, obligate symbionts may have more restricted gene flow due to recruitment limitations, making host specificity an important potential driver of biodiversity. To explore the tension between broad dispersal ability and limited recruitment potential, we used sequences of mtDNA cytochrome c oxidase subunit I (COI) to assess the fine‐scale phylogeography of the cleaner shrimp, Ancylomenes pedersoni, an obligate symbiont of sea anemones, along 300 km of the Florida Reef Tract (FRT). The results indicate high genetic diversity within A. pedersoni populations along the FRT. Pair‐wise ?ST values indicate significant genetic structuring between northern (Fort Lauderdale and Upper Keys) and southwestern (Lower Keys) populations, with significant isolation by distance. Two divergent COI haplotype lineages were detected through statistical parsimony analysis: one evenly distributed across the entire FRT (Clade 1) and one found primarily in two sample localities in the Lower Keys (Clade 2). Phylogenetic analyses using 16S‐rDNA indicates that this genetic diversity is of paraphyletic origin, and possibly the result of multiple colonization events. These results reveal a complex demographic and evolutionary history for A. pedersoni populations and provide the first evidence of highly divergent intra‐specific lineages independently colonizing the FRT. Because the FRT is a highly impacted coral reef system, understanding phylogeographic patterns along it has value beyond documentation of the factors that generate genetic diversity in tropical reef systems: these data are critical for creating scientifically based management strategies. 相似文献
11.
Amphipoda are a diverse and important faunal component of deep‐sea habitats worldwide. However, relatively little is known about species that are associated with cold‐water corals, in particular concerning their genetic diversity, population genetic processes, population differentiation, and potential host specificity. We exemplarily investigate these questions studying three pleustid species—Stenopleustes aff. malmgreni (Boeck, 1871), Stenopleustes aff. nodifera (Sars, 1883) and Neopleustes aff. boecki (Hansen, 1888)—that are associated with cold‐water corals and polychaete assemblages along the Reykjanes Ridge southwest of Iceland. We sequenced mitochondrial COI and performed ddRAD to study thousands of nuclear loci. These species and a pair of morphologically cryptic species within Stenopleustes aff. nodifera were consistently delimited by COI and ddRAD. We conclude that all of our studied species are new to science, raising the number of pleustids reported from cold‐water corals to six. Two species were collected only once, and these species exhibited high levels of inbreeding, suggesting little exchange with other populations, which might be a result of strong host specificity. The other two species were wider distributed, with very low differentiation among populations, even between populations separated by 130 km. These species showed signs of recent population expansions, possibly in relation to changes in the cold‐water coral associated ecosystem (e.g., due to glacial cycles and/or volcanic or geothermal activities). They had lower levels of inbreeding and were each associated with three different host coral species, which might facilitate dispersal and gene flow. Our results show divergent population genetic patterns for the studied pleustid species. These might be attributed to the species’ host specificity and highlight important differences among species with seemingly similar life‐styles. Species diversities appear to be greatly underestimated, limiting our abilities to truly assess the vulnerability of the fauna living in these threatened cold‐water coral habitats. 相似文献
12.
《Marine Policy》2014
Frequent locations of thermal fronts in UK shelf seas were identified using an archive of 30,000 satellite images acquired between 1999 and 2008, and applied as a proxy for pelagic diversity in the designation of Marine Protected Areas (MPAs). Networks of MPAs are required for conservation of critical marine habitats within Europe, and there are similar initiatives worldwide. Many pelagic biodiversity hotspots are related to fronts, for example cetaceans and basking sharks around the Isle of Man, Hebrides and Cornwall, and hence remote sensing can address this policy need in regions with insufficient species distribution data. This is the first study of UK Continental Shelf front locations to use a 10-year archive of full-resolution (1.1 km) AVHRR data, revealing new aspects of their spatial and seasonal variability. Frontal locations determined at sea or predicted by ocean models agreed closely with the new frequent front maps, which also identified many additional frontal zones. These front maps were among the most widely used datasets in the recommendation of UK MPAs, and would be applicable to other geographic regions and to other policy drivers such as facilitating the deployment of offshore renewable energy devices with minimal environmental impact. 相似文献
13.
Phillip B. Fenberg Jennifer E. Caselle Joachim Claudet Michaela Clemence Steven D. Gaines Jose Antonio García-Charton Emanuel J. Gonçalves Kirsten Grorud-Colvert Paolo Guidetti Stuart R. Jenkins Peter J.S. Jones Sarah E. Lester Rob McAllen Even Moland Serge Planes Thomas K. Sørensen 《Marine Policy》2012
The ecologically and socio-economically important marine ecosystems of Europe are facing severe threats from a variety of human impacts. To mitigate and potentially reverse some of these impacts, the European Union (EU) has mandated the implementation of the Marine Strategy Framework Directive (MSFD) in order to achieve Good Environmental Status (GES) in EU waters by 2020. The primary initiative for achieving GES is the implementation of coherent networks of marine protected areas (MPAs). Marine reserves are an important type of MPA in which no extraction is allowed, but their usefulness depends upon a number of ecological, management, and political factors. This paper provides a synthesis of the ecological effects of existing European marine reserves and the factors (social and ecological) underlying their effectiveness. Results show that existing European marine reserves foster significant positive increases in key biological variables (density, biomass, body size, and species richness) compared with areas receiving less protection, a pattern mirrored by marine reserves around the globe. For marine reserves to achieve their ecological and social goals, however, they must be designed, managed, and enforced properly. In addition, identifying whether protected areas are ecologically connected as a network, as well as where new MPAs should be established according to the MSFD, requires information on the connectivity of populations across large areas. The adoption of the MSFD demonstrates willingness to achieve the long-term protection of Europe's marine ecosystems, but whether the political will (local, regional, and continent wide) is strong enough to see its mandates through remains to be seen. Although the MSFD does not explicitly require marine reserves, an important step towards the protection of Europe's marine ecosystems is the establishment of marine reserves within wider-use MPAs as connected networks across large spatial scales. 相似文献
14.
我国海洋渔业地理信息系统发展现状 总被引：1，自引：0，他引：1
详细总结了我国海洋渔业地理信息系统的研究与应用现状,远洋渔业地理信息系统主要应用于金枪鱼、鱿钓业和秋刀鱼的资源分布、渔获量与渔场环境关系、渔情预报、渔场图绘制等方面,近海主要用于分析东海渔业资源分布和漂移特征、渔场环境分布、部分种类渔获量分布与环境关系及渔情预报等方面。除渔业资源与渔场领域外,渔业地理信息系统还被应用到渔船跟踪、捕捞违法行为判别、渔业信息发布和水产品查询,以及渔港建设等领域,国内学者在进行渔业地理信息系统技术应用的同时,还注重了其技术的研究及改进。 相似文献
15.
16.
流沙湾海草床海域浮游动物的群落
结构和季节变化 总被引：2，自引：0，他引：2
2008年2—11月采用浅水Ⅰ型浮游生物网对广东省流沙湾海草床海域的浮游动物进行了周年的季节调查, 研究了其群落结构、季节变化及影响因素。结果表明, 流沙湾海草床海域浮游动物共有49种和13类浮游幼虫, 群落结构主要由桡足类和浮游幼虫所组成。优势种共有20种(类), 4季均为优势种的种类有2种: 针刺拟哲水蚤、小拟哲水蚤。年均丰度和生物量分别为84.8ind/m3和132.2mg/m3, 高峰期位于夏季, 低谷位于冬季, 周年变化基本上为单峰型。浮游动物生物量与丰度、pH值呈显著的正相关, 与叶绿素a和水温呈较明显的相关性, 而生物量和丰度与盐度和PO43?呈负相关, 与其它环境因子相关性不明显。 相似文献
17.
Knowledge of stock structure is key for the effective management of any fish species. Amphidromous fish, which live and spawn in freshwater but spend a pelagic larval period at sea, have typically been assumed to disperse widely during their larval phase, resulting in populations being sourced from a single unstructured larval pool. We used otolith microchemical analysis to examine the stock structure of bluegill bully (Gobiomorphus hubbsi), a declining amphidromous eleotrid endemic to New Zealand, along the west coast of South Island, New Zealand. Some drainages – even those in close proximity (c. 20?km) – were readily distinguishable based on otolith trace element concentrations, while little structure was evident between other geographically disparate locations. These results indicate that, at least in some cases, locally retained larvae, rather than a single unstructured larval pool, dominates recruitment. Management of bluegill bully and other amphidromous species must therefore consider the possibility of regionally distinct populations. 相似文献
18.
《Marine Policy》2015
International policy frameworks such as the Common Fisheries Policy and the European Marine Strategy Framework Directive define high-level strategic goals for marine ecosystems. Strategic goals are addressed via general and operational management objectives. To add credibility and legitimacy to the development of objectives, for this study stakeholders explored intermediate level ecological, economic and social management objectives for Northeast Atlantic pelagic ecosystems. Stakeholder workshops were undertaken with participants being free to identify objectives based on their own insights and needs. Overall 26 objectives were proposed, with 58% agreement in proposed objectives between two workshops. Based on published evidence for pressure-state links, examples of operational objectives and suitable indicators for each of the 26 objectives were then selected. It is argued that given the strong species-specific links of pelagic species with the environment and the large geographic scale of their life cycles, which contrast to demersal systems, pelagic indicators are needed at the level of species (or stocks) independent of legislative region. Pelagic community indicators may be set at regional scale in some cases. In the evidence-based approach used in this study, the selection of species or region specific operational objectives and indicators was based on demonstrated pressure-state links. Hence observed changes in indicators can reliably inform on appropriate management measures. 相似文献
19.
花鲈和鲈鱼群体的遗传分化研究 总被引：1，自引：0，他引：1
利用随机扩增多态DNA(RAPD)技术对3个中国花鲈(Lateolabrax maculatus)群体(威海,舟山和北海)和4个日本鲈鱼(L.japonicus)群体(东京湾、山口、有明海和八代海)进行了遗传分化研究。18条随机引物在7个群体中共扩增出159条谱带,其中多态性谱带133条(83.65%)。花鲈和鲈鱼群体间的平均等位基因数和平均有效等位基因数分别为1.836 5和1.524 2,Nei’s多样性指数和Shannon多样性信息指数分别为0.3075和0.4586。花鲈和鲈鱼群体内的遗传多样性分别为0.3156~0.3669和0.2982~0.5150。UPGMA聚类分析显示,舟山、威海和北海3个花鲈群体亲缘关系较近并形成一分支,而日本有明海与八代海的鲈鱼群体同花鲈关系较远,它们与另2个鲈鱼群体(东京湾和山口)形成另一分支。本文结果进一步从分子水平上支持将中国产花鲈和日本的鲈鱼划分为2个种的观点,并且RAPD数据表明花鲈和鲈鱼群体内都出现了明显的遗传分化。 相似文献
20.
A wild and a cultured greenshell mussel (Perna canaliculus) population were compared for biochemical genetic variation at seven polymorphic and four monomorphic allozyme loci. Significant heterozygote deficiencies were observed for all polymorphic loci (La—1, La—2, Lap, Lgg—1, Lgg— 2, Pgi, and Pgm) for both populations (except the Pgi locus of the wild mussel population). Genotypic disequilibrium was calculated for both populations: genotypic frequencies were significantly non‐random at three pairs of loci among the wild mussels, and significantly non‐random at three different pairs of loci among the cultured mussels. All six pairs of loci which exhibited significant genotypic disequilibrium involved amino‐peptidases, suggesting that these loci form a linkage group, and that neither the Pgi nor the Pgm loci are associated with this group. Exact tests for population differentiation based upon population‐specific allele distributions indicated that four of the polymorphic loci were significantly heterogeneous among the two populations, whereas the remaining three polymorphic loci were not. Based upon the private allele system, the number of migrants (N m) between the populations was estimated to be 2.009, which, according to the private allele system, represents a high level of gene flow. These findings are discussed with regard to the population biology and genetic structure of this species. 相似文献