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1.
Microbial mat communities host complex biogeochemical processes and play a role in the formation of most carbonate rocks by influencing both carbonate precipitation and dissolution. In this study, the biogeochemistry of microbial mats from the hypersaline Salt Pond, San Salvador, Bahamas are described using scanning electron microscopy, X-ray diffraction, microelectrode profiling, fatty acid methyl esters, and carbon and nitrogen analyses. These microbial mats are distinctly layered both chemically and with regard to composition of microbial community, where significant (?? < 0.05) differences are noted between layers and cores. Furthermore, an oxic upper zone and an H2S-rich lower zone dominate the Salt Pond microbial mats, where H2S concentrations were measured approaching 8 mM. The high H2S concentrations along with the lacking evidence of mineral precipitation in SEM images point to the prevalence of carbonate dissolution. Moreover, the high concentrations of organics (3?C9%) reveal that the mats are self-sourcing and can provide ample fuel to sustain the highly active heterotrophic (both aerobic and anaerobic) metabolism. Seasonal differences in sulfide and oxygen concentrations in Salt Pond mats indicate that the carbonate dissolution and precipitation reactions are dynamic in this hypersaline lake.  相似文献   

2.
The review summarises recent advances towards a greater comprehensive assessment of microbial diversity in aquatic environments using the fatty acid methyl esters and phospholipid fatty acids approaches. These methods are commonly used in microbial ecology because they do not require the culturing of micro-organisms, are quantitative and reproducible and provide valuable information regarding the structure of entire microbial communities. Because some fatty acids are associated with taxonomic and functional groups of micro-organisms, they allow particular groups of micro-organisms to be distinguished. The integration of fatty acid-based methods with stable isotopes, RNA and DNA analyses enhances our knowledge of the role of micro-organisms in global nutrient cycles, functional activity and phylogenetic lineages within microbial communities. Additionally, the analysis of fatty acid profiles enables the shifts in the microbial diversity in pristine and contaminated environments to be monitored. The main objective of this review is to present the use of lipid-based approaches for the characterisation of microbial communities in water columns, sediments and biomats.  相似文献   

3.
Subglacial meltwater plays a significant yet poorly understood role in the dynamics of the Antarctic ice sheets. Here we present new swath bathymetry from the western Amundsen Sea Embayment, West Antarctica, showing meltwater channels eroded into acoustic basement. Their morphological characteristics and size are consistent with incision by subglacial meltwater. To understand how and when these channels formed we have investigated the infill of three channels. Diamictons deposited beneath or proximal to an expanded grounded West Antarctic Ice Sheet are present in two of the channels and these are overlain by glaciomarine sediments deposited after deglaciation. The sediment core from the third channel recovered a turbidite sequence also deposited after the last deglaciation. The presence of deformation till at one core site and the absence of typical meltwater deposits (e.g., sorted sands and gravels) in all three cores suggest that channel incision pre-dates overriding by fast flowing grounded ice during the last glacial period. Given the overall scale of the channels and their incision into bedrock, it is likely that the channels formed over multiple glaciations, possibly since the Miocene, and have been reoccupied on several occasions. This also implies that the channels have survived numerous advances and retreats of grounded ice.  相似文献   

4.
This two-part study examined the benthic macrofaunal community in Delaware salt marsh impoundments having partial tidal restriction. The first part compared abundance, diversity, and taxonomic composition in three habitat types in impoundments—creeks, vegetated creek banks, and ponds—to those found in natural marshes. Impoundment effects were present but were habitat-specific. Abundances were higher in natural marsh creeks than in impoundment creeks, and diversities were higher in impoundment ponds than in natural marsh ponds. Vegetated bank communities in impoundments were about 50% insects and arachnids and 50% oligochaetes, while natural bank communities were primarily oligochaetes and the polychaeteManayunkia aestuarina. This is likely due to the decrease in flooding of the vegetated high marsh caused by partial impoundment. Pond and creek community composition also showed impoundment effects: in comparison with natural marshes, impoundments had higher proportions of the burrowing anemoneNematostella vectensis, nemerteans, andTubificoides sp. oligochaetes and lower proportions of the oligochaeteClitellio arenarius. The second part of the study compared benthic macrofauna in an impoundment before, during, and after the water level was lowered so that some bottom sediments were exposed and some covered with just a few centimeters of water for several weeks. During this event, macrofaunal abundances were reduced and the community shifted from being dominated by annelids, anemones, and nemerteans toward one dominated by annelids and insects. About 6 wk after reflooding, persistent effects of this disturbance were still suggested by greatly increased abundances and 96% dominance by one species of oligochaete,Paranais litoralis. Impoundment management plans calling for periods of sediment exposure or very low water may want to consider the potential for strong and persistent effects on the macrofaunal community.  相似文献   

5.
Dimethylsulfide (DMS) is the major volatile reduced organic sulfur compound in the water column of coastal Salt Pond, Cape Cod, MA. DMS concentration and vertical distributions vary seasonally in response to changing biogeochemical processes in the pond. When the pond is thermally stratified in summer, maximum DMS concentrations of up to 60 nmol/1 were found in the oxygen-deficient metalimnion. DMS concentrations in the epilimnion (typically 5–10 nmol/1) were always an order of magnitude higher than in the hypolimnion (<0.2 nmol/1). The most likely precursor for DMS is algal dimethylsulfoniopropionate (DMSP), which showed vertical profiles similar to those of DMS. Laboratory experiments show that microorganisms in the pond, especially in the metalimnion, are capable of decomposing DMSP to DMS, while photosynthetic sulfur bacteria in the hypolimnion can consume DMS. Estimates of DMS production and consumption in Salt Pond have been made, considering production of DMS in the epilimnion and metalimnion and removal of DMS via gas exchange to the atmosphere, tidal exchange and microbial consumption in the hypolimnion.  相似文献   

6.
Recent analyses of the carbonate globules present in the Martian meteorite ALH84001 have detected polycyclic aromatic hydrocarbons (PAHs) at the ppm level (McKay et al., 1996). The distribution of PAHs observed in ALH84001 was interpreted as being inconsistent with a terrestrial origin and were claimed to be indigenous to the meteorite, perhaps derived from an ancient martian biota. We have examined PAHs in the Antarctic shergottite EETA79001, which is also considered to be from Mars, as well as several Antarctic carbonaceous chondrites. We have found that many of the same PAHs detected in the ALH84001 carbonate globules are present in Antarctic carbonaceous chondrites and in both the matrix and carbonate (druse) component of EETA79001. We also investigated PAHs in polar ice and found that carbonate is an effective scavenger of PAHs in ice meltwater. Moreover, the distribution of PAHs in the carbonate extract of Antarctic Allan Hills ice is remarkably similar to that found in both EETA79001 and ALH84001. The reported presence of L-amino acids of apparent terrestrial origin in the EETA79001 druse material (McDonald and Bada, 1995) suggests that this meteorite is contaminated with terrestrial organics probably derived from Antarctic ice meltwater that had percolated through the meteorite. Our data suggests that the PAHs observed in both ALH84001 and EETA79001 are derived from either the exogenous delivery of organics to Mars or extraterrestrial and terrestrial PAHs present in the ice meltwater or, more likely, from a mixture of these sources. It would appear that PAHs are not useful biomarkers in the search for extinct or extant life on Mars.  相似文献   

7.
The relations among geochemical parameters and sediment microbial communities were examined at three shoreline sites in the Prince William Sound, Alaska, which display varying degrees of impact by acid-rock drainage (ARD) associated with historic mining of volcanogenic massive sulfide deposits. Microbial communities were examined using total fatty acid methyl esters (FAMEs), a class of compounds derived from lipids produced by eukaryotes and prokaryotes (bacteria and Archaea); standard extraction techniques detect FAMEs from both living (viable) and dead (non-viable) biomass, but do not detect Archaeal FAMEs. Biomass and diversity (as estimated by FAMEs) varied strongly as a function of position in the tidal zone, not by study site; subtidal muds, Fe oxyhydroxide undergoing biogenic reductive dissolution, and peat-rich intertidal sediment had the highest values. These estimates were lowest in acid-generating, intertidal zone sediment; if valid, the estimates suggest that only one or two bacterial species predominate in these communities, and/or that Archeal species are important members of the microbial community in this sediment.  相似文献   

8.
In response to the lack of studies focussing on the residence time of molecular biomarkers in soils, the lipid content of three soil profiles from the French Massif Central with different land use history were examined. The free neutral lipid content of two reference soil profiles developed under grassland and forest vegetation, and of a former grassland soil converted to forest about 60 years ago, was analysed using gas chromatography–mass spectrometry (GC–MS). Wax esters as well as the ratio of major homologues of n-alkanes and n-alkan-2-ones could be used to characterise the overlying vegetation in the reference forest and grassland soil profiles, but failed to distinguish the respective grassland and forest contributions to the profile of the soil that had changed use. For n-alkanes and n-alkan-2-ones, the failure might be attributed either to mixing of the molecular patterns inherited from the former and current plant cover, whereas for compounds such as wax esters simple degradation is likely to be involved. Conversely, iso- and anteiso-C15:0 fatty acid methyl esters (FAMEs; of bacterial origin), steroids (tracing cattle faecal contamination), tricyclic diterpenoids and their oxygenated derivatives, as well as methoxyserratenes (inherited from Pinaceae) and triterpenyl acetates (specific to the Asteraceae), proved to be effective in distinguishing current land use for the reference soil profiles and for the converted soil. The persistence of these compounds in the changed use soil allowed us to estimate their residence time in soil.  相似文献   

9.
The efficient use of energy is an important issue of public interest. In the Neubrandenburg heat storage surplus heat from a gas and steam cogeneration plant is stored in an aquifer system for use of the stored energy during times of high heat demand. The reliability of such a plant can strongly be influenced by microbial communities. Therefore, biogeochemical monitoring of the heat storage of Neubrandenburg was conducted from March 2006 to January 2010 to characterize the natural variability of prokaryotic life by way of phospholipid fatty acid (PLFA) analysis and the availability of electron acceptors (e.g. sulfate) and donors [e.g. dissolved organic carbon (DOC)] under different operating modes of the plant. Analysis of the fluid chemistry showed that a sufficient amount of electron acceptors (sulfate ca. 1 g/l) and donors (DOC up to 19 mg/l) for potential microbial respiration and energy consumption is present. Phospholipid analysis of filter samples from the heat storage revealed a viable microbial community in the plant with adaptation to changes in the operating mode (charge/discharge) and associated variation in temperature (45–73 °C). The PLFAs mainly influenced were saturated and branched FAs, most likely reflecting temperature adaptation by a variable microbial community in different parts of the heat storage. Furthermore, branched monoenoic FAs indicated the presence of sulfate-reducing bacteria within the plant.  相似文献   

10.
http://www.sciencedirect.com/science/article/pii/S1674987114000668   总被引：1，自引：0，他引：1  
Microbial diversity in the hydrate-containing (sites SH3B and SH7B) and-free (sites SH1B, SH5B, SH5C) sediments collected from the Shenhu area of the South China Sea (SCS) was investigated using 16S rR...  相似文献   

11.
复合分异度不仅能表明化石群内属种的多寡，而且能反映各种个数分配是否均匀。它对划分生物群落和恢复沉积环境具有重要意义。文中讨论了复合分异度的概念，并选用了信息函数熵H(s)作为分异度的计算方法，分析统计了山东济阳坳陷东营凹陷沙三段至沙一段沉积时期的介形类分析化验资料，并计算了东营凹陷现有资料井各时期的分异度值，做出了分异度等值线图。根据分异度的值及区域内的优势种，共划分出了各时期的11个生物群落，即Limnocythere armata（具刺湖花介）、Phacocypris huiminensis（惠民小豆介），Pseudocandona boxingsis（博兴假玻璃介），Camarocypris elliptica（椭圆拱形介），Huabeinia unispinata（单刺华北介），Camarocypris ovata（卵形拱星介），Huabeinia chinensis（中国华北介），Camarocypris ovata（卵形拱星介），Huabeinia chinensis（中国华北介），Cyprois mina（小型拟星介），Huabeinia obscura（隐瘤华北介）。个体古生态资料和复合分异度值对生物相划分和环境划分起着重要的作用，结合生物群落划分出了东营凹陷各时期的沉积环境。  相似文献   

12.
Investigation of chlorins in the oxic surface sediment of a small eutrophic alpine lake (Motte lake) revealed the presence of a new series of steryl chlorin esters containing the pheophorbide a nucleus, together with their pyropheophorbide a steryl ester counterparts previously observed in the anoxic surface sediment of the same lake. Identification of the pheophorbide a steryl esters was based on comparison of spectroscopic, chromatographic and mass spectrometric characteristics of the compounds with those of a synthetic standard and of pyropheophorbide a steryl esters. Combined liquid chromatography-mass spectrometry analysis confirmed the absence of pheophorbide a steryl esters in the anoxic sediment but allowed their detection in traces in the water column, indicating that pheophorbide a steryl esters are, like their pyropheophorbide a analogs, formed in the water column. The distribution of sterols released by hydrolysis of the pheophorbide a steryl esters shows close similarities to that of the free sterols in the water column and of the sterols of the pyropheophorbide a steryl esters. It appears that, like their pyropheophorbide a counterparts, pheophorbide a steryl esters incorporate mainly sterols of phytoplanktonic origin. Their formation probably involves the same mechanism as for pyropheophorbide a steryl ester formation, i.e. metabolism by zooplankton grazing on phytoplankton. The presence of pheophorbide a steryl esters in the oxic sediment and their absence from the anoxic sediment is probably due to a lower stability of compounds containing a carbomethoxy substituent in the anoxic environment.  相似文献   

13.
Stage V and adult females of the marine copepod Calanus helgolandicus were fed in the laboratory on the dinoflagellate Scrippsiella trochoidea at three concentrations calculated to represent pelagic ocean to ‘bloom’ conditions. The identification and quantification of sterols, fatty acids and alcohols present in the algal diet, copepods and their faecal pellets were then carried out using computerized gas chromatography- mass spectrometry (C-GC-MS). The grazing rates of animals were measured and the data then combined with those of lipid distributions in the diet and faecal pellets in order to determine quantitatively the fate of each lipid during its passage through the gut of Calanus. The results showed marked differences in the proportion of the three lipid classes removed, with highest values found for fatty acids and the lowest for sterols. Up to 97% of ingested algal fatty acids were removed by the copepod, with a preference towards the removal of polyunsaturated acids. Algal sterols were also removed by Calanus; the percentage composition and concentration of sterols in faecal pellets differing from the algal diet at all three food levels. Evidence that the removal of lipids from the diet represented assimilation by the copepods was provided by the further finding that during the feeding period (20 hr) all three lipid classes increased in animal tissues. Quantitative measurements of individual sterols revealed that significant amounts of 4-methyl and 4-desmethyl sterols having the 8(14) and 17(20) unsaturation were removed at all dietary levels. In contrast, ring-saturated stanols were not removed and appear to pass through the gut quantitatively.  相似文献   

14.
The interaction of plant and microbial communities are known to influence the dynamics of methane emission in wetlands. Plant manipulations were conducted in an organic rich (JB-organic) and a mineral rich (JB-mineral) site in a tidal freshwater wetland to determine if plant removal impacted archaeal populations. In concert, a suite of process-based measurements also determined the effects of plant removal on rates of methanogenesis and Fe-reduction. The microbial populations were analyzed with clone libraries of the SSU ribosomal RNA (rRNA) gene from selected plots, and terminal restriction length polymorphism (tRFLP) of the SSU rRNA and the methyl-coenzyme M reductase (mcrA) gene. Overall, methanogenesis dominated anaerobic carbon mineralization at both sites during the most active growing season. A total of 114 SSU rRNA clones from four different plots revealed a diversity of Euryarchaeota including representatives of the Methanomicrobiales, Methanosarcinales and Thermoplasmatales. The clone libraries were dominated by the Thaumarchaeota, accounting for 65 % of clones, although their diversity was low. A total of 112 tRFLP profiles were generated from 56 samples from 25 subplots; the patterns for both SSU rRNA and mcrA showed little variation between sites, either with plant treatment or with the growing season. Overall these results suggest that wetland soil archaeal populations were resilient to changes in the associated surface plant communities. The work also revealed the presence of novel, mesophilic Thaumarchaeota of unknown metabolic function.  相似文献   

15.
Resource subsidy regimes, which range from presses to pulses, are common structuring forces in communities, yet research contrasting their effects is lacking. Many coastal marine ecosystems, including estuaries and coral reefs, have experienced increased nutrient subsidies while concurrently shifting to macroalgal dominance; however, the role of subsidy regime in transitions remains unknown. We created concentration–frequency distributions of nutrients in Cook’s Bay, Moorea, French Polynesia, and Carpinteria Salt Marsh Reserve, CA, USA. Both showed relatively high pulses interspersed by press concentrations. We grew dominant macroalgae alone and together in microcosms approximating these subsidy regimes to quantify individual performance and competitive outcomes. Subsidy regime changed growth and competitive abilities of macroalgae from both ecosystems but with divergent effects. In nutrient-limited reefs, different species were favoured under each enrichment regime, suggesting a fluctuating nutrient environment enhances diversity. In contrast, in eutrophic estuaries, enrichment of both regimes facilitated a single competitive dominant, suppressing diversity. Functional form groups did not predict responses to subsidy regime, likely because classifications ignore temporal variability in resource supplies. Because climate change will alter rainfall patterns globally, further accelerating nutrient subsidies from land to sea, understanding species’ responses to nutrient subsidy regimes is key to predicting the fate of coastal communities.  相似文献   

16.
Bacteriochlorophylls c and d, recovered from two sedimentary sequences, were converted to bacteriophaeophorbide methyl esters by methanolysis and analysed by atmospheric pressure chemical ionisation liquid chromatography-multistage mass spectrometry (APCI LC-MSn). The distributions in both settings, a moderately consolidated sediment from Kirisjes Pond, Antarctica, and in a finely laminated microbial mat from Les Salines de la Trinitat, Spain, show significant variations within a narrow depth interval. The overall bacteriophaeophorbide c to d ratios in the two sediments are different, as are the ratios of particular C-31 diastereoisomers, indicating distinct differences between the bacterial communities that contributed to each sediment. Furthermore, a shift towards more extensive alkylation in homologues within each sediment is consistent either with changing environmental conditions in the depositional environments, or development-related changes in the structure of the bacterial community, leading to increased competition for light or nutrients.  相似文献   

17.
Diversity within distinct trophic groups is proposed to increase ecosystem functions such as the productivity of this group and the efficiency of resource use. This proposition has mainly been tested with plant communities, consumer assemblages, and multitrophic microbial assemblages. Very few studies tested how this diversity–productivity relationship varies under different environmental regimes such as disturbances. Coastal benthic assemblages are strongly affected by temporal instability of abiotic conditions. Therefore, we manipulated benthic ciliate species richness in three laboratory experiments with three diversity levels each and analyzed biomass production over time in the presence or absence of a single application of a disturbance (ultraviolet-B [UVB] radiation). In two out of three experiments, a clear positive relationship between diversity and productivity was found, and also the remaining experiment showed a small but nonsignificant effect of diversity. Disturbance significantly reduced the total ciliate biomass, but did not alter the relation between species richness and biomass production. Significant overyielding (i.e., higher production at high diversity) was observed, and additive partitioning indicated that this was caused by niche complementarity between ciliate species. Species-specific contribution to the total biomass varied idiosyncratically with species richness, disturbance, and composition of the community. We thus present evidence for a significant effect of consumer diversity on consumer biomass in a coastal ciliate assemblage, which remained consistent at different disturbance regimes.  相似文献   

18.
Fecal pellets from the pelagic crab Pleuroncodes planipes were a substantial portion of the particulate organic matter in a sediment trap deployed at the bottom of the mixed layer in the eastern tropical North Pacific Ocean. The lipids of fresh P. planipes feces were compared to lipids of the sediment trap material, of mixed zooplankton which may comprise part of the diet of the crab, and of the crab itself in order to elucidate the source of organic compounds found in the trap. Hydrocarbons, wax esters, triacylglycerols, steroidal alcohols, steroidal ketones, and fatty acids were determined by capillary gas chromatography and gas chromatography/mass spectrometry. Significant input of lipids via sedimentation of crab fecal material is indicated, and modification of dietary lipid within the gut of the crab is inferred. Labile dietary fatty acids are depleted and sterols enriched in the fecal pellets and trap material relative to the zooplankton and crab. Nuclear saturated and unsaturated 3-ketosteroids and unsaturated steroidal hydrocarbons were detected in the crab, its feces, and in the sediment trap particulate material.  相似文献   

19.
We investigated the molecular inventory of River Danube sediments and identified wax esters with 28–36 carbons, with C30, C31 and C32 homologs the most abundant. They consist of various combinations of n-, iso- and anteiso-aliphatic acid and alcohol moieties, with different isomer distributions for the esters with odd and even carbon numbers. The short chain length (C28–C36), high proportion of methyl moieties and presence of monounsaturated esters together suggest a bacterial origin for the wax esters. The concentration in surface sediments varied from 0 to 741 μg/kg, being significantly enriched at locations with high nutrient concentration and high primary productivity. Cluster analysis of denaturing gradient gel electrophoresis (DGGE) band patterns revealed different bacterial communities in surface sediments from the stream and surface sediments from the reservoir. The concentration in a 70 cm core of rapidly deposited sediments decreased significantly with depth, following first order kinetics, suggesting a loss of the esters within ca. 3 years following burial and hence a low probability for preservation in the geological record. Wax esters in rivers have rarely been investigated; our results suggest that they represent a bacterial response to enhanced primary production, triggered by higher nutrient supply.  相似文献   

20.
The sewage treatment plant (STP) at La Parguera, on the southwest coast of Puerto Rico, discharges an average of 228,000 dm3 of secondary sewage effluents per day into percolation ponds located at the landward margin of the coastal mangrove fringe. Effluents flowing from the STP percolation ponds to the adjacent mangrove fringe typically exhibited nitrate levels between 0.2 mM and 1.0 mM. Experimental determination of actual and potential denitrification using acetylene block and substrate disappearance techniques indicate that mangrove sediment microbial communities are capable of depurating 10 to 15 times the nitrate added in the STP effluent. Plots of porewater salinities vs nitrate concentrations show exponential decay of nitrate concentration. Our observations confirm the potential of mangrove sediment-microbial communities for nitrate depuration of secondary sewage effluents.  相似文献   

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