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1.
东海多环旋沟藻的形态特征和系统进化分析 总被引：1，自引：1，他引：0
本文首次对分离自我国东海海域的多环旋沟藻(Cochlodinium polykrikoides Margalef)藻株进行了详细的分类学报道。通过运用光学显微镜、荧光显微镜、电子扫描电镜和分子生物学方法,对多环旋沟藻的形态和显微特征进行了详细的描述,并对其核糖体大亚基序列(LSU rDNA)进行了系统进化分析。该藻以单细胞或链状细胞形态存在。通常链状包括2、4、8和16个细胞。横沟宽且深围绕细胞近2圈,内含鞭毛。纵沟窄并浅紧挨着横沟延伸。具有U形顶沟,细胞核大而圆,分布在上锥的前端。叶绿体棒状,数量较多并呈簇状分布。测序获得核糖体大亚基D1—D3区序列为870bp,通过构建系统发育树和Jukes-Cantor遗传距离矩阵可知东海多环旋沟藻藻株为东亚型。 相似文献
2.
本文利用18S r RNA基因对4株经形态学初步鉴定的梅尼小环藻(Cyclotella meneghiniana)进行了分子鉴定。结果显示,这4株分离自淡水环境(2株)和海水环境(2株)的梅尼小环藻的18S r RNA基因序列基本一致,并与已经报道的梅尼小环藻(登录号为GQ148712和AY496212)聚为一支,不同方法所构建的系统树的支持率分别为99%(邻接法)和98%(最大似然法),表明这4株来自不同环境的藻为同一物种——梅尼小环藻。随后作者利用扫描电镜技术在亚显微水平上对这4株梅尼小环藻进行了观察,结果显示:梅尼小环藻淡水株和海水株具有相当不同的亚显微结构特征。生活在海水的梅尼小环藻藻株具有更大的细胞以及更多的中央支持突。此外,本文还对造成梅尼小环藻种内高水平形态差异的原因以及18S r RNA基因序列是否可以作为小环藻属物种鉴定的分子标记做了分析和讨论。 相似文献
3.
利用ITS-5.8S rDNA序列对2株海洋亚历山大藻进行的分子鉴定 总被引：4，自引：0，他引：4
扩增2株分离自青岛胶州湾、从形态上初步确定为亚历山大藻属(Alexandrium sp. qd2, Alexandrium sp. qd3)的5.8S 核糖体基因(5.8S rDNA), 转录单元内间隔区(Internal Transcribed Spacer, ITS) 序列、部分18S rDNA和28S rDNA序列.通过blastn比对、系统进化树以及遗传距离分析将A.sp.qd2和A.sp.qd3鉴定为A.catenella,且属于A.catenella 的不同株型. 相似文献
4.
5.
化学互感作用或化感作用(allelopathy)在浮游植物的种群相互作用及动力学过程中起着重要的调节控制作用,已经成为有害藻华生态学研究中的重要领域。但在被研究的种类和化感作用的规律等方面还存在众多空白。本研究选取分离自中国和美国近海的重要藻华甲藻多环旋沟藻(Cochlodinium polykrikoides)、米氏凯伦藻(Karenia mikimotoi)、剧毒卡尔藻(Karlodinium veneficum)、短沟别什莱藻(Biecheleria brevisulcate),在相同的试验条件下(72 h共培养)观察其与另一种常见的藻华甲藻红色赤潮藻(Akashiwo sanguinea)的化感作用。实验结果显示化感效应随种类和特别是起始细胞密度比率而分别表现为抑制或促进共存种的生长。与起始细胞密度为500个/m L的红色赤潮藻共培养时,多环旋沟藻起始密度为250个/m L时促进红色赤潮藻生长,米氏凯伦藻苏澳株和短沟别什莱藻在细胞密度低于1 000个/m L时促进红色赤潮藻生长,同时起始密度为5 000~50 000个/m L的剧毒卡尔藻被红色赤潮藻促进生长。但是,米氏凯伦藻深圳湾株在细胞密度500个/m L以上时均抑制红色赤潮藻生长,多环旋沟藻在起始密度大于250个/m L时开始抑制红色赤潮藻生长,且抑制效应在起始密度2 500个/m L时接近100%。米氏凯伦藻的化感作用在不同株系间表现出显著差异。结果说明有害藻华甲藻之间的化感作用表现出复杂的形式,随着作用的种类和互相之间的密度比率变化而有互相促进、抑制或一方抑制(或促进)另一方等作用,这对进一步认识藻华甲藻的种群动力学具有重要意义。 相似文献
6.
2015年5月，我们从天津近海分离出一株黄绿色具鞭毛的单细胞藻。这珠藻细胞形态不规则，从圆形到细长型都有出现。绝大多数细胞具有很强的运动能力，一些细胞也可以形成静止的群体。结合形态学、超显微结构观察以及分子生物学分析，我们将这株藻鉴定为定鞭藻门，巴夫藻纲的膨胀巴夫藻。在此之前，中国近海只有绿色巴夫藻的记录，绿色巴夫藻对于水产养殖起到了很重要的作用。巴夫藻纲的其他物种尚无中国海记录。这是膨胀巴夫藻在中国海的首次记录。 相似文献
7.
自胶州湾分离培养2株微藻(MGB0401和MGB0402)。经形态学鉴定为新月细柱藻(Cylindrotheca closterium)。MGB0401和MGB0402的18S核糖体RNA基因(rDNA)扩增片段长度为1775 bp,存在10个碱基差异。MGB0401和MGB0402的rbcL基因扩增片段长度为1190 bp,有45个碱基差异,对应的氨基酸序列存在4个氨基酸残基差异。系统学分析表明,2株微藻与已知新月细柱藻相应序列亲缘关系最近。微藻常用系统学分析用基因的序列不仅是分类鉴定的补充指标,也是不同研究结果相互比较的重要基础。 相似文献
8.
北部湾海域球形棕囊藻遗传多样性分析 总被引：6，自引：3，他引：3
南海北部湾海域近年来连年暴发球形棕囊藻赤潮，严重威胁近海生态安全，亟待探明赤潮成因。球形棕囊藻是一种广泛分布于温带至热带海域的有害藻华微藻，具有明显的种下遗传分化。为了解北部湾海域球形棕囊藻的遗传多样性及其对赤潮藻种来源的指示意义，本研究针对分离于北部湾海域赤潮发生期间的4株棕囊藻，以核糖体28S大亚基rRNA基因（28S rDNA）D1-D2区和转录间隔区（ITS区）为靶区构建克隆文库，通过测序分析了北部湾海域球形棕囊藻的遗传多样性。结果表明，从北部湾分离的4株棕囊藻均为球形棕囊藻，但不同年份分离的球形棕囊藻藻株之间存在明显的遗传差异。部分球形棕囊藻藻株（PG2015和PG2017）的不同克隆间也存在遗传差异，这种遗传差异在由单一藻细胞建立的克隆培养系中仍存在，表明遗传差异是来自细胞内多拷贝的基因序列，可能源自不同地理种群球形棕囊藻之间的基因交流。与ITS区相比，28S rDNA D1-D2区能更好地反映球形棕囊藻遗传多样性状况，具有作为分子标记指示球形棕囊藻地理种群的潜力，但仍需深入研究。研究结果深化了对北部湾球形棕囊藻遗传多样性的认识，有望为进一步解析北部湾海域球形棕囊藻赤潮原因种来源提供判据。 相似文献
9.
骨条藻(Skeletonema)隶属于硅藻门(Bacillariophyta),是一种分布广泛的广温广盐性藻类,也是我国沿海常见的赤潮生物之一。为确定北部湾涠洲岛5株骨条藻的分类地位,采用PCR克隆了这5株骨条藻核糖体的大亚基基因(LSU)和内转录间隔区(ITS)序列。通过与GenBank数据库中骨条藻属的LSU、ITS序列进行比对,得出的结果一致:5株涠洲岛骨条藻均为热带骨条藻(Skeletonema tropicum)。本研究运用分子标记法,首次确定了北部湾涠洲岛海域存在有热带骨条藻,结果可为涠洲岛与广西北部湾海域浮游植物多样性、赤潮生物组成及赤潮的预警与有效防治提供科学依据。 相似文献
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为了弄清北部湾涠洲岛6株疑似红色赤潮藻（Akashiwo sanguinea）株的种类，作者采用光学显微镜和荧光显微镜对其进行形态学初步鉴定；并对藻株SSU rDNA、LSU rDNA和ITS序列测序，利用最大似然法构建系统发育树。结果表明，北部湾涠洲岛6株藻与红色赤潮藻形态特征基本符合；3种序列系统发育树分析均发现北部湾涠洲岛6株藻与不同海域来源的红色赤潮藻聚在同一大分支上，自展值高达99、100、100；与来自亚洲海域的韩国安山株、新加坡株、中国厦门港株序列差异最小，亲缘关系最近，而与其他地理来源的红色赤潮藻序列差异大，亲缘关系较远。红色赤潮藻SSU、LSU、ITS种内遗传距离分别为0.001~0.008、0.003~0.025和0.045~0.406，明显小于该藻与其他裸甲藻科（Gymnodiniaceae）藻属下的种间遗传距离0.032~0.072、0.165~0.222和0.589~1.559，因此可确定北部湾涠洲岛6株藻均为红色赤潮藻。研究结果将为北部湾海域赤潮生物来源与组成、赤潮的发生与管理提供基础信息。 相似文献
12.
First observation of Karlodinium veneficum from the East China Sea and the coastal waters of Germany
WANG Hongxi LU Douding HUANG Haiyan G&#;BEL Jeanette DAI Xinfeng XIA Ping 《海洋学报(英文版)》2011,30(6):112-121
Harmful algal blooms often occurred in the East China Sea (ECS) and the German coastal waters of the North Sea but Karlodinium veneficum had not been taxonomically reported. Two strains of Karlodinium (LAMB090611 and LAMB010601) were isolated from the two areas in 2009. The morphological characteristics and molecular phylogeny of two strains are compared on the basis of observation of a light microscope, a scanning electron microscope (SEM), a laser scanning micro-scope (LSM) and an internal transcribed spacer (ITS) sequence data. The mean cell length of strain LAMB090611 is (14.2 ± 1.8) μm (range 11.1-18.7 μm) and mean width is (10.8 ± 1.5) μm (range 8.2- 14.7 μm). The mean cell length of strain LAMB010601 is (15.1 ± 1.2) μm (range 12.7-17.9 μm) and the mean width is (11.4 ± 1.1) μm (range 9.1-14.7 μm), respectively. The two strains are similar in morphological characteristics, including a straight apical groove, distinct ventral pore, sulcal extension, cingulum displacement, two or four irregular shaped chloroplasts within the cell and almost equal sized epicone and hypocone. The large and round nucleus is located at the center or at the hypocone of the cell. The sequence length of the ECS strain LAMB090611 and the German strain LAMB010601 is 640 and 646 bp, respectively. The GC content is 49%. The nucleotide similarity of the two strains is 98.1%. The sequence divergence is 0.003. Both strains are confirmed as Karlo-dinium veneficum (D. Ballantine) J. Larsen and this is the first taxonomic report from China and Germany coastal waters. The population dynamics of this toxic species in the ECS and German coastal waters needs to be investigated in the near future. 相似文献
13.
Pyrosequencing reveals specific associations of bacterial clades Roseobacter and Flavobacterium with the harmful dinoflagellate Cochlodinium polykrikoides growing in culture 
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下载免费PDF全文 Harmful algal blooms of the dinoflagellate Cochlodinium polykrikoides are of worldwide environmental concern. Previous field studies have demonstrated the association of such algal blooms with free‐living bacteria (FLB) and particle‐associated bacteria (PAB). In the present study, we report evidence for bacterial association with C. polykrikoides in laboratory culture. Sampling was performed at different growth stages (lag, exponential and stationary) and pyrosequencing was used to identify taxa. As a result, the community structures of FLB and PAB were elucidated and significant differences between FLB and PAB were identified by hierarchical cluster analysis and the similarity profiles test (p = .05). The relative abundances of bacterial operational taxonomic units distinctly changed in response to the different phases of C. polykrikoides growth. The Roseobacter genus Marivita and the Flavobacterium genus Winogradskyella were dominant in the FLB and PAB associated with C. polykrikoides, respectively. The Roseobacter clade, which has also exhibited associations with C. polykrikoides blooms in field samples, may influence host cell growth through the provision of vitamins. 相似文献
14.
大口黑鲈(Micropterus salmoides)是我国重要的淡水养殖经济鱼类品种,目前包括细菌性疾病在内的诸多因素影响了其养殖业的健康发展。维氏气单胞菌是引起淡水鱼败血症和溃疡综合征的重要病原菌。从患病大口黑鲈肝脏组织中分离到1株病原菌,通过形态学观察、生理生化特性分析、16S rRNA序列和特定毒力基因分析对其进行鉴定,并通过人工回归感染试验和药敏试验分析其致病性和耐药性。结果表明该菌为致病性维氏气单胞菌(Aeromonas veronii),含有aer、act、lip、fla、gcaT和OMPA I等毒力基因;药敏试验显示其对头孢曲松、氯霉素、氟苯尼考、强力霉素、四环素、多粘菌素、复方新诺明、左氟沙星等8种抗生素高度敏感,对新霉素、恩诺沙星、庆大霉素、链霉素、阿齐霉素、环丙沙星等6种抗生素中度敏感,对其他8种抗生素具有一定耐药性;人工回归感染实验表明该菌具有较高的致病性,对大口黑鲈的半致死浓度为1.4×106 CFU/mL。维氏气单胞菌是水产养殖中的条件性致病菌,研究结果揭示了该菌株的部分生物学特性,有利于丰富维氏气单胞菌属的基础数据,同时也为鲈鱼养殖过程中的病害防控提供了一定的参考依据。 相似文献
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近年来细菌性疾病因病原菌种类繁多、覆盖区域广而影响了其养殖业的健康发展，造成较大的经济损失。从体表具有黑斑、肢体残损症状的罗氏沼虾(Macrobrachium rosenbergii)肝胰腺组织中分离得到1株病原菌，通过形态学观察、生理生化特性鉴定、16S rRNA序列和特定毒力基因检测鉴定，以及人工回归感染试验和药敏试验分析其致病性和耐药性。结果表明，该菌为豚鼠气单胞菌(Aeromonas caviae)，含有aer、lip、gcat、ser和OMPA I等毒力基因；药敏试验显示其对头孢曲松、氯霉素等7种抗生素高度敏感，对恩诺沙星、阿米卡星及复方新诺明3种抗生素中度敏感，对四环素、环丙沙星等10种抗生素具有耐药性；人工回归感染实验表明该菌具有较高的致病性，对罗氏沼虾的半致死浓度为6.54×105 CFU/mL。豚鼠气单胞菌作为水产养殖中的条件性致病菌，研究结果揭示了该菌株的部分生物学特性，有利于丰富豚鼠气单胞菌属的基础数据，同时也为罗氏沼虾养殖过程中的病害防控提供了一定参考依据。 相似文献
16.
溶藻细菌MS7的分类鉴定及其溶藻活性的初步研究 总被引：1，自引：0，他引：1
采用形态学、生理生化指标和16SrRNA基因序列同源性分析的方法,对菌株MS7进行鉴定,并通过溶藻试验测定该菌株对铜绿微囊藻(Microcystis aeruginosa)的溶藻活性和溶藻方式。结果表明,MS7菌株为苏云金芽孢杆菌(Bacillus thuringiensis),对铜绿微囊藻具有高效溶藻效果,当菌浓度为108cells/mL,初始藻液叶绿素a浓度为0.7mg/L时,48h溶藻率达到91%。主要通过分泌胞外物质的间接方式溶藻,溶藻物质属于具有很强的热稳定性的非蛋白质类物质。 相似文献
17.
New PCR primers (N=18) were designed for the isolation of complete SSU to LSU rDNA sequences from the dinoflagellateAlexandrium tamarense. Standard PCR, employing each primer set selected for amplifications of less than 1.5 kb, successfully amplified the expected
rDNA regions of A. tamarense (Korean isolate, HY970328M). Complete SSU, LSU rDNAs and ITS sequences, including 5.8S rDNA,
were recorded at 1,800 bp, 520 bp and 3,393 bp, respectively. The LSU rDNA sequence was the first report inAlexandrium genus. No intron was found in the LSU rRNA coding region. Twelve D-domains within the LSU rDNA were put together into 1,879 bp
(44.4% G+C), and cores into 1514 bp (42.8% G+C). The core sequence was significantly different (0.0867 of genetic distance,
91% sequence similarity) in comparison withProrocentrum micans (GenBank access. no. X16108). The D2 region was the longest in length (300 bp) and highly variable among the 12 D-domains.
In a phylogenetic analysis using complete LSU rDNA sequences of a variety of phytoplankton,A tamarense was clearly separated with high resolution against other species. The result suggests that the sequence may resolve the taxonomic
ambiguities ofAlexandrium genus, particularly of the tamarensis complex. 相似文献
18.
采用常规表观生物学特性及16S rRNA、gyrB及rpoA基因同源性检索与系统发育学分析等方法,对分离自江苏连云港某育苗场的大批死亡日本对虾蚤状幼体的优势生长菌进行了综合鉴定。结果表明,其形态和生理生化特征与弧菌属的需钠弧菌相近;16S rRNA、gyrB及rpoA基因同源性检索也均与需钠弧菌相似性最高,分别为98%、89%和95%,且三种基因的NJ系统发育树也均与需钠弧菌聚为一个分支;分离菌的致病性试验表明其半数致死量LD50为1.8×106CFU/ml。综合分离菌的致病性、形态与生理生化特征及基因同源性与系统发育分析结果,认为引起日本对虾蚤状幼体大批死亡的病原为需钠弧菌。基于gyrB基因序列设计1套LAMP特异性引物,建立了需钠弧菌的快速特异性检测方法,可用于由需钠弧菌引起的水产动物疾病的诊断及分子流行病学的调查研究。 相似文献
19.
Young Baek Son Joji Ishizaka Jong-Chul Jeong Hyun-Choel Kim Taehee Lee 《Ocean Science Journal》2011,46(4):239-263
To distinguish true red tide water (particularly Cochlodinium polykrikoides blooms) from non-red tide water (false satellite high chlorophyll water) in the South Sea of Korea, we developed a systematic
classification method using spectral information from MODIS level products and applied it to five different harmful algal
bloom events. Red tide and nonred tide waters were classified based on four different criteria. The first step revealed that
the radiance peaks of potential red tide water occurred at 555 and 678 nm. The second step separated optically different waters
that were influenced by relatively low and high contributions of colored dissolved organic matter (CDOM) (including detritus)
to chlorophyll. The third and fourth steps discriminated red tide water from non-red tide water based on the blue-to-green
ratio in areas with lower and higher contributions of CDOM to chlorophyll, respectively. After applying the red tide classification
(using the four criteria), the spectral response of the red tide water, which is influenced by pigment concentration, showed
different slopes for the blue and green bands (lower slope at blue bands and higher slope at green bands). The opposite result
was found for non-red tide water, due to decreasing phytoplankton absorption and increasing detritus/CDOM absorption at blue
bands. The results were well matched with the discoloration of water (blue to dark red/brown) and delineated the areal coverage
of C. polykrikoides blooms, revealing the nature of spatial and temporal variations in red tides. This simple spectral classification method
led to increase user accuracy for C. polykrikoides and non-red tide blooms (>46% and >97%) and provided a more reliable and robust identification of red tides over a wide range
of oceanic environments than was possible using chlorophyll a concentration, chlorophyll anomaly, fluorescence analysis, or proposed red tide detection algorithms. 相似文献
20.
The dinoflagellate genus Margalefidinium has been split from Cochlodinium as a new genus recently and Margalefidinium fulvescens is one of the five Margalefidinium species. Margalefidinium fulvescens is toxic and has been reported from the coastal waters of USA, Canada, Mexico, China, Japan, Indonesia, Korea, Pakistan and Spain. Here we provide the morphological and phylogenetic characterization for an isolate of it from the Jiaozhou Bay, Qingdao, China. Our results showed that the vegetative cells were subspherical to ellipsoidal, 34–60 μm in length, and 19–41 μm in width. Both single cell forms and colonies in chains of 2, 4, or 8 cells were observed in cultures, but chain forms with 2 or 4 cells were observed more often in the field samples. The cingulum was rather deep, encircling the cell approximately twice, but the sulcus was rather narrow, surrounding the cell about one turn. The nucleus was spherical and located at the central epicone. The chloroplasts were granular, brownish, and scattered peripherally. An orange pigmented body also appeared in the epicone. The apical groove appeared vase-like as previously described. Under epi-fluorescence microscopy, a pumpkin-like structure was clearly observed, in which cells were embedded. Cells were observed to exit from the structure, which led us to a hypothesis that the structure may provide cells a shelter to avoid predation or to respond to other stresses. The phylogenetic analyses based on partial LSU rDNA sequences indicated that M. fulvescens from the Jiaozhou Bay was grouped with M. fulvescens populations from other origins and closely related to the clade of M. polykrikoides.Our morphological observations and phylogenetic analyses together confirmed the presence of M. fulvescens in China and our monitoring has also observed the species dominant in the dinoflagellate community of the Jiaozhou Bay in the early autumn of 2015, which alerted us to continually monitor this bloom-forming species in the region. 相似文献