Modelling potential impacts of bottom trawl fisheries on soft sediment biogeochemistry in the North Sea†     

Daniel E Duplisea  Simon Jennings  Stephen J Malcolm  Ruth Parker  David B Sivyer 《Geochemical transactions》2001,2(1):1-6

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A comparison of cytochrome P4501A (CYP1A) mRNA inducibility in four species of Atlantic coast anadromous fishes     

Isaac Wirgin  Blake Konkle  Mark Pedersen  Cheryl Grunwald  Jim Williams  Simon C. Courtenay 《Estuaries and Coasts》1996,19(4):913-922

Quantification of levels of cytochrome P4501A (CYP1A) gene expression in sentinel species of fishes has been proposed as a management tool to evaluate contamination of aquatic systems. Based on preliminary studies, we hypothesized that differences in CYP1A mRNA inducibility among individuals, populations, or species might lead to spurious conclusions when using this approach in environmental monitoring programs. To address this possibility, we quantitated and compared CYP1A mRNA induction levels in four species of common Atlantic Coast estuarine fish: smooth flounder, hogchoker, striped bass, and Atlantic tomcod, which were treated with model chemicals (beta naphthoflavone (β-NF), or benzo[a]pyrene at 10 ppm) known to induce CYP1A mRNA, or were exposed to contaminated environments. Species-specific CYP1A DNA probes were generated from PCR (polymerase chain reaction) amplification of genomic DNA using conserved oligonucleotide primers, and, along with cloned rainbow trout and Atlantic tomcod CYP1A cDNA probes were used to quantify CYP1A mRNA levels in northern blot analyses. Successful PCR amplification of CYP1A hybridizable DNA fragments was observed for all four species. Results from northern blot analyses showed large differences in CYP1A mRNA induction among species; only Atlantic tomcod exhibited significant induction of CYP1A mRNA for both chemically treated (97-fold) and environmentally exposed fish (34-fold). Significant, although lower, levels of induction were observed in β-NF treated (14-fold) smooth flounder, but not in environmentally exposed smooth flounder. Only low levels (not significant) of CYP1A gene induction were detected in hogchokers and striped bass. We conclude that CYP1A mRNA inducibility differed significantly among fish taxa perhaps due to differences in regulation of gene expression, suggesting that careful selection of sentinel species should be exercised prior to the use of CYP1A mRNA induction in environmental monitoring programs. However, the significance of differences in CYP1A mRNA inducibility in relation to higher level biological endpoints has yet to be determined.  相似文献   

High electrical conductivity in a model lower crust with unconnected, conductive, seismically reflective layers     

A. M. Merzer  Simon L. Klemperer† 《Geophysical Journal International》1992,108(3):895-905

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Endmember graphics     

Ross M. Renner  Simon R. Jurke 《Mathematical Geosciences》1992,24(3):287-303

Thek points inp-space corresponding to a specified set ofk (k<p) linearly independent endmember estimates associated with ap-variate (n×p) compositional datasetX, define the vertices of a (k?1) dimensional simplexH. Then estimated mixtures which together account for the systematic variation in the datasetX, are each convex combinations of thek fixed endmember estimates. Accordingly, then-points inp-space which represent these mixtures must be interior points of the simplexH. The purpose of this paper is to describe a simple graphical procedure for examining the positions of the estimated mixtures relative tok=3 or 4 putative endmembers, and for assessing their compliance or otherwise with the convexity constraints. Since the mixture coefficients must be estimated first in order to obtain the mixture estimates, the paper begins with a review of the least-squares partitioning procedure.  相似文献   

Adjusting to Policy Expectations in Climate Change Modeling   总被引：1，自引：0，他引：1  

Simon Shackley  James Risbey  Peter Stone  Brian Wynne 《Climatic change》1999,43(2):413-454

This paper surveys and interprets the attitudes of scientists to the use of flux adjustments in climate projections with coupled Atmosphere Ocean General Circulation Models. The survey is based largely on the responses of 19 climate modellers to several questions and a discussion document circulated in 1995. We interpret the responses in terms of the following factors: the implicit assumptions which scientists hold about how the environmental policy process deals with scientific uncertainty over human-related global warming; the different scientific styles that exist in climate research; and the influence of organisations, institutions, and policy upon research agendas. We find evidence that scientists' perceptions of the policy process do play a role in shaping their scientific practices. In particular, many of our respondents expressed a preference for keeping discussion of the issue of flux adjustments within the climate modeling community, apparently fearing that climate contrarians would exploit the issue in the public domain. While this may be true, we point to the risk that such an approach may backfire. We also identify assumptions and cultural commitments lying at a deeper level which play at least as important a role as perceptions of the policy process in shaping scientific practices. This leads us to identify two groups of scientists, pragmatists and purists, who have different implicit standards for model adequacy, and correspondingly are or are not willing to use flux adjustments.  相似文献   

The coarse structure of the solar atmosphere     

M. Simon  H. Zirin 《Solar physics》1969,9(2):317-327

Observations of the quiet sun at wavelengths from 3 Å to 75 cm show (with two exceptions: the Ovi line at 1032 Å and possibly the continuum at 1.2 mm) either no limb brightening or less than had been supposed. On the other hand, the brightness temperature is observed to increase with wavelength in the millimeter and centimeter range. If this increase is due to greater visibility of hot overlying material, that material ought to be evident at the limb at shorter wavelengths, resulting in limb brightening. The only possible explanation for the absence of limb brightening at almost all wavelengths is that the emitting surface is rough at all wavelengths, with a scale of roughness approximately equal to the scale height at each temperature. Contradictions with existing models, along with the additional observations required for an improved model are discussed.  相似文献   

Preface     

Simon M. Cargill  Allen L. Clark 《Mathematical Geology》1978,10(5):405-406

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Supergranule and Mesogranule Evolution   总被引：2，自引：0，他引：2  

Shine  R.A.  Simon  G.W.  Hurlburt  N.E. 《Solar physics》2000,193(1-2):313-331

The MDI instrument on the SOHO satellite obtained a nearly continuous 45.5-hr run in high-resolution mode on 17–18 January 1997, collecting continuum, Dopplergram, and magnetogram images once per minute. This is one of the longest data sets yet obtained in this mode and shows significant evolution of the supergranulation pattern. After allowing for solar rotation within the fixed field of view, an area spanning 17° in latitude and 11° in longitude was extracted that covers the same area of the solar surface for the entire run. From the de-rotated continuum images, we computed flow maps of photospheric motions using local correlation techniques (LCT). Horizontal divergence maps constructed from the flow maps show local maxima of the size of mesogranules (5–10). We interpret these as mesogranules although the LCT flow map resolution (4.8 FWHM) may not completely resolve smaller mesogranules. Movies made from the divergence maps clearly show the outward convection (advection) of these mesogranules within each supergranule, and narrow boundaries of negative divergence outlining the supergranules. Several new supergranules are observed forming. These appear as areas of strong divergence that pop up between pre-existing supergranules and grow, pushing their neighbors apart. Others seem to perish between growing neighbors. We also computed the vertical component of vorticity from the flow maps. Movies of this vorticity do not show any obvious patterns.  相似文献   

Mathematical expressions used in amino acid racemisation geochronology—A review     

Simon J. Clarke  Colin V. Murray-Wallace 《Quaternary Geochronology》2006,1(4):261-278

A variety of mathematical expressions that describe changes over time (t) in the extent of amino acid racemisation (AAR, expressed as the ratio of d- to l-amino acid isomers or epimers) have been used in Quaternary geochronology. The integrated rate equation was first used to estimate fossil age from D/L but its geochronological utility is disadvantaged by uncertainties regarding the conformity of AAR in fossil protein to apparent reversible first-order kinetics for the entire reaction history. ‘Non-linear’ models have subsequently been used to relate D/L to t. The logarithmic equation successfully applied to Atlantic Coastal Plain research has not achieved widespread application, perhaps due to the regional calibration required if sensitivity to temperature is to be modelled, or the difficulties encountered when extending the model to include fossils with D/L<0.1. Success producing a linear correlation between D/L transformed with a power function and t has seen this approach emerge as one of the most commonly applied in AAR geochronology in recent years. Like parabola curve fitting, which has been applied to trends in D/L versus t in a variety of fossils and geographic settings, power transformations may not be suitable for geochronological modelling during the latter stages of amino acid diagenesis. Several studies have demonstrated the utility of simple and contingent linear equations for relating D/L to t. Future research should aim to reduce reliance on independent calibration and explore the geochronological benefits of AAR in pools other than the total hydrolysable amino acids.  相似文献   

Brest sea level record: a time series construction back to the early eighteenth century     

Guy Wöppelmann  Nicolas Pouvreau  Bernard Simon 《Ocean Dynamics》2006,56(5-6):487-497

The completeness and the accuracy of the Brest sea level time series dating from 1807 make it suitable for long-term sea level trend studies. New data sets were recently discovered in the form of handwritten tabulations, including several decades of the eighteenth century. Sea level observations have been made in Brest since 1679. This paper presents the historical data sets which have been assembled so far. These data sets span approximately 300 years and together constitute the longest, near-continuous set of sea level information in France. However, an important question arises: Can we relate the past and the present-day records? We partially provide an answer to this question by analysing the documents of several historical libraries with the tidal data using a ‘data archaeology’ approach advocated by Woodworth (Geophys Res Lett 26:1589–1592, 1999b). A second question arises concerning the accuracy of such records. Careful editing was undertaken by examining the residuals between tidal predictions and observations. It proved useful to remove the worst effects of timing errors, in particular the sundial correction to be applied prior to August 1, 1714. A refined correction based on sundial literature [Savoie, La gnomique, Editions Les Belles Lettres, Paris, 2001] is proposed, which eliminates the systematic offsets seen in the discrepancies in timing of the sea level measurements. The tidal analysis has also shown that shallow-water tidal harmonics at Brest causes a systematic difference of 0.023 m between mean sea level (MSL) and mean tide level (MTL). Thus, MTL should not be mixed with the time series of MSL because of this systematic offset. The study of the trends in MTL and MSL however indicates that MTL can be used as a proxy for MSL. Three linear trend periods are distinguished in the Brest MTL time series over the period 1807–2004. Our results support the recent findings of Holgate and Woodworth (Geophys Res Lett) of an enhanced coastal sea level rise during the last decade compared to the global estimations of about 1.8 mm/year over longer periods (Douglas, J Geophys Res 96:6981–6992, 1991). The onset of the relatively large global sea level trends observed in the twentieth century is an important question in the science of climate change. Our findings point out to an ‘inflexion point’ at around 1890, which is remarkably close to that in 1880 found in the Liverpool record by Woodworth (Geophys Res Lett 26:1589–1592, 1999b).  相似文献