Cytogenetic mechanism for the aneuploidy and mosaicism found in tetraploid Pacific oyster Crassostrea gigas (Thunberg)     

ZHANG Zhengrui  WANG Xinglian  ZHANG Quanqi  and Standish Allen Jr. 《中国海洋大学学报(英文版)》2014,13(1):125-131

Chromosome constitution was investigated in adult tetraploid Pacific oyster produced by blocking the first polar body of triploid eggs which were fertilized with haploid sperms. A high incidence of aneuploid and heteroploid mosaics were found among the offspring. Of 20 individuals identified, only 9 (45%) were eutetraploid which contained 40 chromosomes; 2 (10%) were aneuploid (hypotetraploid), which contained 39 and 38 chromosomes, respectively; and 9 (45%) were heteroploid mosaics. One mosaic was consisted of cells containing 40 and 39 chromosomes, respectiovely (1:1 in cell number), while the other 8 were consisted of cells containing chromosomes varying between tetraploid and triploid. It was also interesting to note that 3 mosaics even contained some diploid cells with 20 chromosomes. A certain number of cells of 2 tetraploids and 8 mosaics spread with 32–37 well-scattered and some clumped chromosomes at metaphase. The percentage of aneuploid cells with chromosomes varying between triploid and tetraploid correlated significantly with that of heteroploid mosaics cells with clumping chromosomes (P<0.05). Our findings suggested that reversion existed in both tetraploid and triploid oyster and chromosome clumping may underline the chromosome elimination in tetraploid oyster. It seems that the reversing cells, at least some of them, continuously eliminate their chromosomes until the most stable diploid state is established.  相似文献   

Equipped to deal with uncertainty in climate and impacts predictions: lessons from internal peer review   总被引：1，自引：0，他引：1  

Anna Wesselink  Andrew Juan Challinor  James Watson  Keith Beven  Icarus Allen  Helen Hanlon  Ana Lopez  Susanne Lorenz  Friederike Otto  Andy Morse  Cameron Rye  Stephane Saux-Picard  David Stainforth  Emma Suckling 《Climatic change》2015,132(1):1-14

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Determining the 3D Structure of the Corona Using Vertical Height Constraints on Observed Active Region Loops     

G. Allen Gary  Qiang Hu  Jong Kwan Lee  Markus J. Aschwanden 《Solar physics》2014,289(10):3703-3721

The corona associated with an active region is structured by high-temperature, magnetically dominated closed and open loops. The projected 2D geometry of these loops is captured in EUV filtergrams. In this study using SDO/AIA 171 Å filtergrams, we expand our previous method to derive the 3D structure of these loops, independent of heliostereoscopy. We employ an automated loop recognition scheme (Occult-2) and fit the extracted loops with 2D cubic Bézier splines. Utilizing SDO/HMI magnetograms, we extrapolate the magnetic field to obtain simple field models within a rectangular cuboid. Using these models, we minimize the misalignment angle with respect to Bézier control points to extend the splines to 3D (Gary, Hu, and Lee 2014). The derived Bézier control points give the 3D structure of the fitted loops. We demonstrate the process by deriving the position of 3D coronal loops in three active regions (AR 11117, AR 11158, and AR 11283). The numerical minimization process converges and produces 3D curves which are consistent with the height of the loop structures when the active region is seen on the limb. From this we conclude that the method can be important in both determining estimates of the 3D magnetic field structure and determining the best magnetic model among competing advanced magnetohydrodynamics or force-free magnetic-field computer simulations.  相似文献   

The Danebury Iron Age meteorite—An H5 ordinary chondrite “find” from Hampshire,England     

C. T. Pillinger  J. M. Pillinger  D. Johnson  R. C. Greenwood  A. G. Tindle  A. J. T. Jull  D. H. Allen  B. Cunliffe 《Meteoritics & planetary science》2014,49(6):946-957

What remains of a 30 g sample, first recognized as a meteorite in 1989 during characterization of metalworking debris from Danebury, an Iron Age hillfort, in Hampshire, England, has been classified as an H5 ordinary chondrite. Its arrival on Earth has been dated as 2350 ± 120 yr BP, making it contemporary with the period of maximum human activity at the recovery site. Despite its considerable terrestrial residence age, the interior of the specimen is remarkably fresh with a weathering index of W1/2. There is, however, no evidence of human intervention in its preservation. Its near‐pristine state is explained in terms of its serendipitous burial during the back‐fill of a pit dug into chalk by prehistoric people for the storage of grain. This chance discovery has interesting ramifications for the survival of meteorites in areas having a high pH because of a natural lime content arising as a result of the local geology.  相似文献   

Linking Hydrogeomorphology and Food Webs in Intertidal Creeks     

Robert R. Christian  Dennis M. Allen 《Estuaries and Coasts》2014,37(1):74-90

Intertidal creeks are shallow, photic ecosystems that potentially serve as sources of prey for many predators within estuaries. In a previous study, the link between nekton community structure and hydrogeomorphological variables for eight intertidal creeks was assessed for North Inlet estuary, South Carolina. Herein, we advance their findings through ecological network analysis of foodweb structure within two creeks and infer nekton trophic relationships to geomorphology and potential influences of hydrological condition and change. A summer network of a shallow, wide creek demonstrated greater carbon recycling, trophic efficiency and flow through consumers than that of a deep, narrow creek representing the same period. We infer greater export of nekton carbon from the former creek. These results were supported by analyses of nekton effective trophic levels and guilds across the eight creeks. Shallow, wide intertidal creeks appear to provide both physical and foodweb attributes that promote good nekton habitat relative to deeper and narrower creeks. Human alterations to flow regimes and sea-level rise have the ability to affect geomorphology of individual creeks and the landscape as a whole. These changes in turn have the potential to alter food webs of intertidal creeks and their ability to serve as sources of food for the larger estuary.  相似文献   

Virus occurrence in private and public wells in a fractured dolostone aquifer in Canada     

Amy S. Allen  Mark A. Borchardt  Burney A. KiekeJr  Kari E. Dunfield  Beth L. Parker 《Hydrogeology Journal》2017,25(4):1117-1136

Groundwater samples from 22 wells completed in a regional fractured dolostone aquifer in the Guelph region of southern Ontario, Canada, were collected over an 8-month period and analyzed for viruses and Campylobacter jejuni. Only 8% of the 118 samples exhibited viruses at extremely low concentrations, but of the 22 wells sampled, 10 (45%) were positive for human enteric viruses (polyomavirus, adenovirus A, and GII norovirus) including 5 of the 8 public supply wells (62.5%) and 5 of the 11 private wells (45%). Each virus-positive well had only one virus occurrence with six sampling events during the 8-month sampling campaign and only one virus type was detected in each well. The probability of virus detection was positively associated with well open-interval length. Virus concentration (in the wells that were virus-positive) was negatively associated with well depth and open-interval length and positively associated with overburden thickness (i.e., the thickness of unconsolidated materials overlying bedrock facies) and the amount of precipitation 8–14 and 15–21 days prior to the sampling date. The ephemeral nature of the virus detections and the low detection rate on a per sample basis were consistent with previous studies. The percentage of virus-positive wells, however, was much higher than previous studies, but consistent with the fact that the hydrogeologic conditions of fractured bedrock aquifers create wide capture zones and short groundwater travel times to wells making them more vulnerable to contamination occurrence but at very low concentrations.  相似文献   

Nekton Use of Flooded Salt Marsh and an Assessment of Intertidal Creek Pools as Low-Tide Refuges     

Dennis M. Allen  Virginia Ogburn-Matthews  Paul D. Kenny 《Estuaries and Coasts》2017,40(5):1450-1463

Patterns of nekton occurrence on the salt marsh surface at high tide and in an adjacent intertidal creek pool at low tide were used to investigate movements of nekton in an intertidal basin. Paired collections were made in North Inlet estuary, SC on 67 dates over 9 years. Comparisons of high- and low-tide total abundance indicated that what remained in the creek pool at low tide was representative of the nekton on the flooded marsh. Of the 64 taxa collected, the same 8 species ranked in the top 10 in both the high- and low-tide collections. Abundances of most resident species were positively correlated with the area of marsh flooded, but mummichog (Fundulus heteroclitus), the most abundant resident, was not. Abundances of young-of-the-year transient species were not related to the extent of tidal flooding. Some transient species used the flooded marsh but did not occupy the pool at low tide, and others found in the pool did not use the marsh. Differences in abundance, biomass, and length between the marsh and pool collections indicated differences in the tendency of species and life stages to retreat downstream of the pool to the subtidal channel. Proportionately more of the nekton that were present on the flooded marsh left the intertidal basin when large changes in temperature and salinity occurred between high and low tides. More transients left the basin following higher tides, but more residents did not. The results demonstrate a wide range of taxonomic and ontogenetic patterns among nekton using intertidal salt marsh basins and the underappreciated importance of intertidal creek pools as alternative low-tide refuges.  相似文献   

Seeing through the magnetite:Reassessing Eoarchean atmosphere composition from Isua(Greenland) ≥3.7 Ga banded iron formations     

Allen P. Nutman  Vickie C. Bennett  Clark R.L. Friend 《地学前缘(英文版)》2017,8(6):1233-1240

Estimates of early atmosphere compositions from metamorphosed banded iron formations(BIFs)including the well-studied ≥3.7 BIFs of the Isua supracrustal belt(Greenland)are dependent on knowledge of primary versus secondary Fe-mineralogical assemblages.Using new observations from locally well preserved domains,we interpret that a previously assumed primary redox indicator mineral,magnetite,is secondary after sedimentary Fe-clays(probably greenalite)±carbonates.Within ~3.7 Ga Isua BIF,pre-tectonic nodules of quartz+Fe-rich amphibole±calcite reside in a finegrained(≤100 μm)quartz+magnetite matrix.We interpret the Isua nodule amphibole as the metamorphosed equivalent of primary Fe-rich clays,armoured from diagenetic oxidative reactions by early silica concretion.Additionally,in another low strain lacunae,~3.76 Ga BIF layering is not solid magnetite but instead fine-grained magnetite+quartz aggregates.These magnetite+quartz aggregates are interpreted as the metamorphosed equivalent of Fe-clay-rich layers that were oxidised during diagenesis,because they were not armoured by early silicification.In almost all Isua BIF exposures,this evidence has been destroyed by strong ductile deformation.The Fe-clays likely formed by abiotic reactions between aqueous Fe~(2+)and silica.These clays along with silica±carbonate were deposited below an oceanic Fe-chemocline as the sedimentary precursors of BIF.Breakdown of the clays on the sea floor may have been by anaerobic oxidation of Fe~(2+),a mechanism compatible with iron isotopic data previously published on these rocks.The new determinations of the primary redoxsensitive Fe-mineralogy of BIF significantly revise estimates of early Earth atmospheric oxygen and CO_2 content,with formation of protolith Fe-rich clays and carbonates compatible with an anoxic Eoarchean atmosphere with much higher CO_2 levels than previously estimated for Isua and in the present-day atmosphere.  相似文献   

Multiple rainfall event pollution transport by sustainable drainage systems: the fate of fine sediment pollution     

D. Allen  S. Arthur  H. Haynes  V. Olive 《International Journal of Environmental Science and Technology》2017,14(3):639-652

A key design criterion of sustainable urban drainage systems is to mitigate urban stormwater pollution. Current research defines sustainable urban drainage systems (SuDS) pollutant treatment efficiency through the detention of total suspended solids, urban nutrients and heavy metal pollutants within the system during a design flow event, with research focusing on sand (>2 mm) sediment movement. The impact of multiple rainfall–runoff events on the fine sediment (<2 mm) treatment efficiency of SuDS is not yet well defined, and the temporal movement of detained sediment has not been investigated in detail. The field research presented in this paper addresses this research gap, monitoring ongoing fine sediment transport through a best-practice-designed SuDS network over 12 months through the use of a novel rare earth oxide trace methodology. Through time-stepped monitoring of the fine sediment pollution across three SuDS treatment trains (networks), the following key conclusions have been drawn. (1) That fine sediment becomes re-suspended and re-deposited within SuDS assets and the network as a result of ongoing multiple rainfall–runoff events. (2) That this re-suspension continues for over 52 weeks. (3) That by area, linear wetlands (within the monitored networks) outperform wetland and swale assets in multiple event fine sediment detention. And (4) that multiple event monitoring and analysis of fine sediment within a SuDS network highlights the under-performance of SuDS assets against current design event expectations.  相似文献   

A quantitative technique for assessing the roundness of pottery sherds in water currents     

J. R. L. Allen 《Geoarchaeology》1989,4(2):143-155

The shape property of transposed pottery sherds that changes most rapidly due to wear during water transport in natural sedimentary environments is roundness, the degree of curvature of edges and corners. of the many methods for the measurement of particle roundness, which are briefly reviewed, that proposed by Wadell (1932, 1933) is considered to specify roundness best. A simple and rapid procedure for the measurement of the Wadell projection roundness is described, which yields roundness values having a precision of the order of a few percent, the precision improving with the degree of roundness. the technique is therefore suitable for the analysis of large samples of transposed and transported sherds.  相似文献