A Comparison of Simulated Particle Fluxes Using NEMURO and Other Ecosystem Models in the Western North Pacific     

Michio J. Kishi  Takeshi Okunishi  Yasuhiro Yamanaka 《Journal of Oceanography》2004,60(1):63-73

JGOFS has revealed the importance of marine biological activity to the global carbon cycle. Ecological models are valuable tools for improving our understanding of biogeochemical cycles. Through a series of workshops, the North Pacific Marine Science Organization (PICES) developed NEMURO (North Pacific Ecosystem Model Understanding Regional Oceanography) a model, specifically designed to simulate the lower trophic ecosystem in the North Pacific Ocean. Its ability to simulate vertical fluxes generated by biological activities has not yet been validated. Here compare NEMURO with several other lower trophic level models of the northern North Pacific. The different ecosystem models are each embedded in a common three-dimensional physical model, and the simulated vertical flux of POM and the biomass of phytoplankton are compared. The models compared are: (1) NEMURO, (2) the Kishi and Nakata Model (Kishi et al., 1981), (3) KKYS (Kawamiya et al., 1995, 2000a, 2000b), and (4) the Denman model (Denman and Peña, 2002). With simple NPZD models, it is difficult to describe the production of POM (Particulate Organic Matter) and hence the simulations of vertical flux are poor. However, if the parameters are properly defined, the primary production can be well reproduced, even though none of models we used here includes iron limitation effects. On the whole, NEMURO gave a satisfactory simulation of the vertical flux of POM in the northern North Pacific.  相似文献   

Active spreading and hydrothermalism in North Fiji Basin (SW Pacific). Results of Japanese French Cruise Kaiyo 87     

Jean-Marie Auzende  Eiichi Honza  Xavier Boespflug  Satendra Deo  Jean-Philippe Eissen  Jun Hashimoto  Philippe Huchon  Junichiro Ishibashi  Yo Iwabuchi  Philip Jarvis  Masato Joshima  Kiyoyuki Kisimoto  Yasuto Kuwahara  Yves Lafoy  Tsuyoshi Matsumoto  Jean-Pierre Maze  Kiyohiko Mitsuzawa  Hiroyasu Monma  Takeshi Naganuma  Yukihiro Nojiri  Suguru Ohta  Kiyoshi Otsuka  Yoshihisa Okuda  Hélène Ondreas  Akira Otsuki  Etienne Ruellan  Myriam Sibuet  Manabu Tanahashi  Takeo Tanaka  Tetsuro Urabe 《Marine Geophysical Researches》1990,12(4):269-283

The aim of the Japanese-French Kaiyo 87 cruise was the study of the spreading axis in the North Fiji Basin (SW Pacific). A Seabeam and geophysical survey allowed us to define the detailed structure of the active NS spreading axis between 16° and 22° S and its relationships with the left lateral motion of the North Fiji Fracture Zone. Between 21° S and 18°10′ S, the spreading axis trends NS. From 18°10 S to 16°40 S the orientation of the spreading axis changes from NS to 015°. North of 16°40′ S the spreading axis trends 160°. These two 015° and 160° branches converge with the left lateral North Fiji fracture zone around 16°40′ S to define an RRFZ triple junction. Water sampling, dredging and photo TV deep towing give new information concerning the hydrothermal activity along the spreading axis. The discovery of hydrothermal deposits associated with living communities confirms this activity.  相似文献   

A cDNA microarray technique applied for analysis of global gene expression profiles in tributyltin-exposed ascidians   总被引：2，自引：0，他引：2  

Azumi K  Fujie M  Usami T  Miki Y  Satoh N 《Marine environmental research》2004,58(2-5):543-546

To analyze global gene expressions, we constructed a cDNA microarray from a basal chordate, the ascidian Ciona intestinalis. Ciona is a cosmopolitan species and a genomic analysis of Ciona revealed that ascidians had approximately 15,500 protein-coding genes. Our "Ciona intestinalis cDNA chip version 1 (Ci cDNA chip ver. 1)" has arrayed 13,400 unique Ciona cDNAs. To establish a detection system for gene expression profiles in wild ascidians using a cDNA microarray, we analyzed gene expressions in the whole body of Ciona adults after exposure to 100 nM tributyltin (TBT) for 24 h. In our preliminary array data using Ci cDNA chip ver. 1, we found more than 200 genes that showed strong differential expressions. These genes encoded proteins that were concerned with stress response, detoxification, oxidoreduction reaction, biosynthesis, and catabolism. This, the first large cDNA microarray of this animal, should facilitate analyses of global gene expressions following exposure to TBT.  相似文献   

Jellyfish patch formation investigated by aerial photography and drifter experiment     

Shinya Magome  Tomohiro Yamashita  Takeshi Kohama  Atsushi Kaneda  Yuichi Hayami  Satoru Takahashi  Hidetaka Takeoka 《Journal of Oceanography》2007,63(5):761-773

Jellyfish patch formation is investigated by conducting a drifter experiment combined with aerial photography of a sustained patch of the moon jellyfish in Hokezu Bay, Japan. Jellyfish patches are aggregations of individuals that are caused by a combination of swimming (active influence) and advection by currents (passive influence). The drifter experiment involved the injection of 49 drifters around a distinct surface patch of jellyfish within an area of approximately 300 m × 300 m. The drifters’ motion, caused only by the passive influence, was recorded in a series of 38 aerial photographs taken over approximately 1 h. The ambient uniform current field larger than the patch scale was estimated from the movement of the centroid position of drifters, while the distribution of horizontal divergence and relative vorticity around the patch was estimated from the time-derivative in areas of triangles formed by the drifters. The centroid positions of both drifters and patches moved stably toward the bay head at different speeds. The difference vector between the patch and drifter centroids was directed to the sun, and was opposite to the ambient current. The distributions of vorticity and divergence around patches exhibited inhomogeneity within the patch scale, and the drifters in this nonuniform current field aggregated near the convergence area within 1 h. The results suggest that horizontal patch formation is predominantly influenced by passive factors at the surface of Hokezu Bay. Furthermore, the upward swimming against downwelling may make sustained patch in surface layer.  相似文献   

High Frequency Current Fluctuations and Cross-shelf Flows around the Pycnocline near the Shelf Break in the East China Sea     

In-Seong Han  Koichiro Kamio  Takeshi Matsuno  Atsuyoshi Manda  Atsuhiko Isobe 《Journal of Oceanography》2001,57(2):235-249

Relation between internal waves with short time scale and density distribution near the shelf break in the East China Sea is studied utilizing moored current meters, thermometers and conductivity-temperature-depth (CTD) casts. A well developed pycnocline was frequently observed around 150–200 m depth near the shelf break accompanied with the development of internal waves with short time scale. During the cruise in May 1998, the intensified internal wave motion with short time scale and the distinct offshore flow were observed just below the lower pycnocline, which shoaled and extended above the shelf area. It is suggested that vertical mixing generated by amplified internal waves would produce cross-shelf ageostophic density current around the pycnocline. During the cruise in May 1999, on the other hand, the lower pycnocline was located offshore below the shelf break, and the internal wave motion was amplified just above the lower pycnocline. In this case, the offshore flow should be generated above the lower pycnocline, but vertical profiles of current velocity were not obtained because acoustic Doppler current profiler (ADCP) data were not available around the lower pycnocline.  相似文献   

Locomotor activity rhythm in the Japanese eel Anguilla japonica elvers     

DOU Shuozeng  TSUKAMOTO Katsumi 《海洋学报(英文版)》2007,26(5):76-89

Under artificial LD cycles(6,12,18 L),the elvers of Japanese eel,Anguilla japonica,showed a 24 h cycle of locomotor activity rhythm being most active at light transitions:the eels' activity rose to a primary peak after lights-off,followed by a quiescent period during which they buried into the shelters or lying motionlessly on sand for most of the time,and then reached a secondary peak before lights-on.Elvers could resynchronize their activity rhythm with a new photo cycle within 4 d.Moreover,their activity level at dark phase significantly increased as the light period was prolonged:higher activity levels during shorter dark period.However,the elvers did not display clearly the existence of a circadian rhythm under constant light or dark conditions.The timing of daily activity rhythm evidenced in the Japanese eels may occur through the action of the LD cycles with a weak participation of an endogenous circadian system.In all the LD cycles,over 99% of the activity occurred in the dark phase,indicating that the eels were always nocturnally active no matter what time of day it might be.Under 12 L conditions,the eels' activity level and the time outside sand were significantly elevated both at light and dark phases as temperature increased from 10~15 to 20~25 ℃.The activity rhythm pattern(i.e.,two peaks occurring around light transitions) did not apparently change among temperatures.However,in contrast with the primary activity peaks immediately after lights-off at 20 and 25 ℃,the timing of the primary peaks at 10 and 15 ℃ showed a latency of a few hours following lights-off,indicating the inhibiting effect of low temperature on the eels' activity.  相似文献   

Model simulations of carbon sequestration in the northwest Pacific by patch fertilization     

Katsumi Matsumoto 《Journal of Oceanography》2006,62(6):887-902

Iron fertilization of nutrient-rich surface waters of the ocean is one possible way to help slow the rising levels of atmospheric CO₂ by sequestering it in the oceans via biological carbon export. Here, I use an ocean general circulation model to simulate a patch of nutrient depletion in the subpolar northwest Pacific under various scenarios. Model results confirm that surface fertilization is an inefficient way to sequester carbon from the atmosphere (Gnanadesikan et al., 2003), since only about 20% of the exported carbon comes initially from the atmosphere. Fertilization reduces future production and thus CO₂ uptake by utilizing nutrients that would otherwise be available later. Effectively, this can be considered as leakage when compared to a control run. This “effective” leakage and the actual leakage of sequestered CO₂ cause a significant, rapid decrease in carbon retention (only 30–45% retained after 10 years and less than 20% after 50 years). This contrasts markedly with the almost 100% retention efficiency for the same duration using the same model, when carbon is disposed directly into the northwest Pacific (Matsumoto and Mignone, 2005). As a consequence, the economic effectiveness of patch fertilization is poor in two limiting cases of the future price path of carbon. Sequestered carbon in patch fertilization is lost to the atmosphere at increasingly remote places as time passes, which would make monitoring exceedingly difficult. If all organic carbon from one-time fertilization reached the ocean bottom and remineralized there, acidification would be about −0.05 pH unit with O₂ depletion about −20 μmol kg⁻¹. These anomalies are probably too small to seriously threaten deep sea biota, but they are underestimated in the model because of its large grid size. The results from this study offer little to advocate purposeful surface fertilization as a serious means to address the anthropogenic carbon problem.  相似文献   

Determination of Sr/Sr mass-dependent isotopic fractionation and radiogenic isotope variation of Sr/Sr in the Neoproterozoic Doushantuo Formation     

Takeshi Ohno  Tsuyoshi Komiya  Yuichiro Ueno  Takafumi Hirata  Shigenori Maruyama 《Gondwana Research》2008,14(1-2):126

We measured both mass-dependent isotope fractionation of δ⁸⁸Sr (⁸⁸Sr/⁸⁶Sr) and radiogenic isotopic variation of Sr (⁸⁷Sr/⁸⁶Sr) for the Neoproterozoic Doushantuo Formation that deposited as a cap carbonate immediately above the Marinoan-related Nantuo Tillite. The δ⁸⁸Sr and ⁸⁷Sr/⁸⁶Sr compositions showed three remarkable characteristics: (1) high radiogenic ⁸⁷Sr/⁸⁶Sr values and gradual decrease in the ⁸⁷Sr/⁸⁶Sr ratios, (2) anomalously low δ⁸⁸Sr values at the lower part cap carbonate, and (3) a clear correlation between ⁸⁷Sr/⁸⁶Sr and δ⁸⁸Sr values. These isotopic signatures can be explained by assuming an extreme greenhouse condition after the Marinoan glaciation. Surface seawater, mixed with a large amount of freshwater from continental crusts with high ⁸⁷Sr/⁸⁶Sr and lighter δ⁸⁸Sr ratios, was formed during the extreme global warming after the glacial event. High atmospheric CO₂ content caused sudden precipitation of cap carbonate from the surface seawater with high ⁸⁷Sr/⁸⁶Sr and lighter δ⁸⁸Sr ratios. Subsequently, the mixing of the underlying seawater, with unradiogenic Sr isotope compositions and normal δ⁸⁸Sr ratios, probably caused gradual decrease of the ⁸⁷Sr/⁸⁶Sr ratios of the seawater and deposition of carbonate with normal δ⁸⁸Sr ratios. The combination of ⁸⁷Sr/⁸⁶Sr and δ⁸⁸Sr isotope systematics gives us new insights on the surface evolution after the Snowball Earth.  相似文献   

Evaluation of change in subsurface thermal environment due to groundwater flow in the Tokyo Lowland,Japan     

Akinobu Miyakoshi  Takeshi Hayashi  Atsunao Marui  Yasuo Sakura  Shinichi Kawashima  Masafumi Kawai 《International Journal of Earth Sciences》2008,97(2):401-411

Information on the distribution of subsurface temperature and hydraulic heads at 24 observation wells in and around the Tokyo Lowland, the eastern part of the Tokyo Metropolitan area, were examined to make clear the relationship between groundwater and the subsurface thermal environment in the urban area. Minimums in temperature–depth logs due to subsurface temperature increasing at shallow parts were recognized in 21 wells. This fact shows subsurface temperature is affected by ground surface warming in almost all of this area. Deeper than minimums, where the effects of surface warming became relatively small, regional variation is observed as follows: high temperatures are shown in the central part to the southern part, and low temperatures shown in the inland to eastern part. The high temperature area corresponds to an area where the lower boundary of groundwater flow is relatively shallow. This area corresponds also to an area with severe land subsidence resulting from excessive groundwater pumping. It is considered that this high temperature area is formed by the effects of upward groundwater flow affected by hydrogeological conditions and pumping. On the other hand, a comparison between past data (1956–1967) and present data (2001–2003) revealed widespread decreasing temperature in the inland area. This is explained by downward groundwater flow based on an analysis of temperature–depth logs. This fact suggests that subsurface temperature is not only increasing from the effects of surface warming but also decreasing from the effects of groundwater environment change due to pumping.  相似文献   

A continuous and mechanistic representation of calcite reaction-controlled kinetics in dilute solutions at 25°C and 1 atm total pressure     

Takeshi Arakaki  Alfonso Mucci 《Aquatic Geochemistry》1995,1(1):105-130

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