Tandem repeat arrays in the mitochondrial genome as a tool for detecting genetic differences among the ark shell Scapharca broughtonii     

Yun‐Guo Liu  Tadahide Kurokawa  Masashi Sekino  Toru Tanabe  Kazuhito Watanabe 《Marine Ecology》2014,35(3):273-280

We found that tandem repeat (TR) arrays were present in the ark shell Scapharca broughtonii mitochondrial genome, and we demonstrated the efficiency of using this TR region as a tool for the detection of genetic differentiation. In samples collected from seven populations off the Japanese, Chinese, Russian and Korean coasts, five TR types with length ranging from 481 to 601 bp (base pairs) were found, as were 18 haplotypes (n = 155). All the Japanese samples from SD, IK, AM and KG, which represented four geographically distinct populations, had the same type of tandem repeat array, 481‐TR. All the samples from China and all but one sample from Russia had the same TR type, 511‐TR; these finding may be strong evidence that the ark shell populations in China and Russia are very similar. Based on a neighbor‐joining dendrogram of haplotypes, the Korean population was divided into two groups as follows: samples with haplotype H481‐3 and samples with haplotypes H601‐1, H601‐2, H601‐3 or H541‐1. Based on the haplotype diversity and nucleotide diversity, the Chinese, Russian and Korean populations showed a higher diversity than Japanese populations (P < 0.05).  相似文献   

In situ observational research of the gap wind “Hijikawa-Arashi” in Japan     

Yukitaka Ohashi  Toru Terao  Yoshinori Shigeta  Teruo Ohsawa 《Meteorology and Atmospheric Physics》2015,127(1):33-48

  相似文献   

Space weathered rims found on the surfaces of the Itokawa dust particles     

Takaaki Noguchi  Makoto Kimura  Takahito Hashimoto  Mitsuru Konno  Tomoki Nakamura  Michael E. Zolensky  Ryuji Okazaki  Masahiko Tanaka  Akira Tsuchiyama  Aiko Nakato  Toshinori Ogami  Hatsumi Ishida  Ryosuke Sagae  Shinichi Tsujimoto  Toru Matsumoto  Junya Matsuno  Akio Fujimura  Masanao Abe  Toru Yada  Toshifumi Mukai  Munetaka Ueno  Tatsuaki Okada  Kei Shirai  Yukihiro Ishibashi 《Meteoritics & planetary science》2014,49(2):188-214

On the basis of observations using Cs‐corrected STEM, we identified three types of surface modification probably formed by space weathering on the surfaces of Itokawa particles. They are (1) redeposition rims (2–3 nm), (2) composite rims (30–60 nm), and (3) composite vesicular rims (60–80 nm). These rims are characterized by a combination of three zones. Zone I occupies the outermost part of the surface modification, which contains elements that are not included in the unchanged substrate minerals, suggesting that this zone is composed of sputter deposits and/or impact vapor deposits originating from the surrounding minerals. Redeposition rims are composed only of Zone I and directly attaches to the unchanged minerals (Zone III). Zone I of composite and composite vesicular rims often contains nanophase (Fe,Mg)S. The composite rims and the composite vesicular rims have a two‐layered structure: a combination of Zone I and Zone II, below which Zone III exists. Zone II is the partially amorphized zone. Zone II of ferromagnesian silicates contains abundant nanophase Fe. Radiation‐induced segregation and in situ reduction are the most plausible mechanisms to form nanophase Fe in Zone II. Their lattice fringes indicate that they contain metallic iron, which probably causes the reddening of the reflectance spectra of Itokawa. Zone II of the composite vesicular rims contains vesicles. The vesicles in Zone II were probably formed by segregation of solar wind He implanted in this zone. The textures strongly suggest that solar wind irradiation damage and implantation are the major causes of surface modification and space weathering on Itokawa.  相似文献   

Mineral chemistry of MUSES‐C Regio inferred from analysis of dust particles collected from the first‐ and second‐touchdown sites on asteroid Itokawa     

Tomoki Nakamura  Aiko Nakato  Hatsumi Ishida  Shigeru Wakita  Takaaki Noguchi  Michael E. Zolensky  Masahiko Tanaka  Makoto Kimura  Akira Tshuchiyama  Toshihiro Ogami  Takahito Hashimoto  Mitsuru Konno  Masayuki Uesugi  Toru Yada  Kei Shirai  Akio Fujimura  Ryuji Okazaki  Scott. A. Sandford  Yukihiro Ishibashi  Masanao Abe  Tatsuaki Okada  Munetaka Ueno  Junichiro Kawaguchi 《Meteoritics & planetary science》2014,49(2):215-227

The mineralogy and mineral chemistry of Itokawa dust particles captured during the first and second touchdowns on the MUSES‐C Regio were characterized by synchrotron‐radiation X‐ray diffraction and field‐emission electron microprobe analysis. Olivine and low‐ and high‐Ca pyroxene, plagioclase, and merrillite compositions of the first‐touchdown particles are similar to those of the second‐touchdown particles. The two touchdown sites are separated by approximately 100 meters and therefore the similarity suggests that MUSES‐C Regio is covered with dust particles of uniform mineral chemistry of LL chondrites. Quantitative compositional properties of 48 dust particles, including both first‐ and second‐touchdown samples, indicate that dust particles of MUSES‐C Regio have experienced prolonged thermal metamorphism, but they are not fully equilibrated in terms of chemical composition. This suggests that MUSES‐C particles were heated in a single asteroid at different temperatures. During slow cooling from a peak temperature of approximately 800 °C, chemical compositions of plagioclase and K‐feldspar seem to have been modified: Ab and Or contents changed during cooling, but An did not. This compositional modification is reproduced by a numerical simulation that modeled the cooling process of a 50 km sized Itokawa parent asteroid. After cooling, some particles have been heavily impacted and heated, which resulted in heterogeneous distributions of Na and K within plagioclase crystals. Impact‐induced chemical modification of plagioclase was verified by a comparison to a shock vein in the Kilabo LL6 ordinary chondrite where Na‐K distributions of plagioclase have been disturbed.  相似文献   

An overview of decadal climate predictability in a multi-model ensemble by climate model MIROC   总被引：1，自引：1，他引：0  

Yoshimitsu Chikamoto  Masahide Kimoto  Masayoshi Ishii  Takashi Mochizuki  Takashi T. Sakamoto  Hiroaki Tatebe  Yoshiki Komuro  Masahiro Watanabe  Toru Nozawa  Hideo Shiogama  Masato Mori  Sayaka Yasunaka  Yukiko Imada 《Climate Dynamics》2013,40(5-6):1201-1222

Decadal climate predictability is examined in hindcast experiments by a multi-model ensemble using three versions of the coupled atmosphere-ocean model MIROC. In these hindcast experiments, initial conditions are obtained from an anomaly assimilation procedure using the observed oceanic temperature and salinity with prescribed natural and anthropogenic forcings on the basis of the historical data and future emission scenarios in the Intergovernmental Panel of Climate Change. Results of the multi-model ensemble in our hindcast experiments show that predictability of surface air temperature (SAT) anomalies on decadal timescales mostly originates from externally forced variability. Although the predictable component of internally generated variability has considerably smaller SAT variance than that of externally forced variability, ocean subsurface temperature variability has predictive skills over almost a decade, particularly in the North Pacific and the North Atlantic where dominant signals associated with Pacific decadal oscillation (PDO) and the Atlantic multidecadal oscillation (AMO) are observed. Initialization enhances the predictive skills of AMO and PDO indices and slightly improves those of global mean temperature anomalies. Improvement of these predictive skills in the multi-model ensemble is higher than that in a single-model ensemble.  相似文献   

Comparison of carbon cycle between the western Pacific subarctic and subtropical time-series stations: highlights of the K2S1 project     

Makio C. Honda  Masahide Wakita  Kazuhiko Matsumoto  Tetsuichi Fujiki  Eko Siswanto  Kosei Sasaoka  Hajime Kawakami  Yoshihisa Mino  Chiho Sukigara  Minoru Kitamura  Yoshikazu Sasai  Sherwood L. Smith  Taketo Hashioka  Chisato Yoshikawa  Katsunori Kimoto  Shuichi Watanabe  Toru Kobari  Toshi Nagata  Koji Hamasaki  Ryo Kaneko  Mario Uchimiya  Hideki Fukuda  Osamu Abe  Toshiro Saino 《Journal of Oceanography》2017,73(5):647-667

A comparative study of ecosystems and biogeochemistry at time-series stations in the subarctic gyre (K2) and subtropical region (S1) of the western North Pacific Ocean (K2S1 project) was conducted between 2010 and 2013 to collect essential data about the ecosystem and biological pump in each area and to provide a baseline of information for predicting changes in biologically mediated material cycles in the future. From seasonal chemical and biological observations, general oceanographic settings were verified and annual carbon budgets at both stations were determined. Annual mean of phytoplankton biomass and primary productivity at the oligotrophic station S1 were comparable to that at the eutrophic station K2. Based on chemical/physical observations and numerical simulations, the likely “missing nutrient source” was suggested to include regeneration, meso-scale eddy driven upwelling, meteorological events, and eolian inputs in addition to winter vertical mixing. Time-series observation of carbonate chemistry revealed that ocean acidification (OA) was ongoing at both stations, and that the rate of OA was faster at S1 than at K2 although OA at K2 is more critical for calcifying organisms.  相似文献   

Did boninite originate from the heterogeneous mantle with recycled ancient slab?          下载免费PDF全文

Susumu Umino  Kyoko Kanayama  Keitaro Kitamura  Akihiro Tamura  Osamu Ishizuka  Ryoko Senda  Shoji Arai 《Island Arc》2018,27(1)

Boninites are widely distributed along the western margin of the Pacific Plate extruded during the incipient stage of the subduction zone development in the early Paleogene period. This paper discusses the genetic relationships of boninite and antecedent protoarc basalt magmas and demonstrates their recycled ancient slab origin based on the T–P conditions and Pb–Hf–Nd–Os isotopic modeling. Primitive melt inclusions in chrome spinel from Ogasawara and Guam islands show severely depleted high‐SiO₂, MgO (high‐silica) and less depleted low‐SiO₂, MgO (low‐silica and ultralow‐silica) boninitic compositions. The genetic conditions of 1 346 °C at 0.58 GPa and 1 292 °C at 0.69 GPa for the low‐ and ultralow‐silica boninite magmas lie on adiabatic melting paths of depleted mid‐ocean ridge basalt mantle with a potential temperature of 1 430 °C in Ogasawara and of 1 370 °C in Guam, respectively. This is consistent with the model that the low‐ and ultralow‐silica boninites were produced by remelting of the residue of the protoarc basalt during the forearc spreading immediately following the subduction initiation. In contrast, the genetic conditions of 1 428 °C and 0.96 GPa for the high‐silica boninite magma is reconciled with the ascent of more depleted harzburgitic source which pre‐existed below the Izu–Ogasawara–Mariana forearc region before the subduction started. Mixing calculations based on the Pb–Nd–Hf isotopic data for the Mariana protoarc basalt and boninites support the above remelting model for the (ultra)low‐silica boninite and the discrete harzburgite source for the high‐silica boninite. Yb–Os isotopic modeling of the high‐Si boninite source indicates 18–30 wt% melting of the primitive upper mantle at 1.5–1.7 Ga, whereas the source mantle of the protoarc basalt, the residue of which became the source of the (ultra)low‐Si boninite, experienced only 3.5–4.0 wt% melt depletion at 3.6–3.1 Ga, much earlier than the average depleted mid‐ocean ridge basalt mantle with similar degrees of melt depletion at 2.6–2.2 Ga.  相似文献   

Seasonal appearance of expatriated boreal copepods in the Oyashio-Kuroshio mixed region     

Kobari  Toru; Moku  Masatoshi; Takahashi  Kazutaka 《ICES Journal of Marine Science》2008,65(3):469-476

  相似文献   

Environmental controls on phytoplankton production in coastal ecosystems: A case study from Tokyo Bay     

Heather A. Bouman  Toru Nakane  Kenji Oka  Kisaburo Nakata  Kiyo Kurita  Shubha Sathyendranath  Trevor Platt 《Estuarine, Coastal and Shelf Science》2010

Phytoplankton biomass and primary production were examined in their environmental context, for a semi-enclosed bay (Tokyo Bay, Japan) using data from monthly samples collected over a three-year period. Heavy precipitation and high surface temperatures in the late spring and summer gave rise to a highly-stratified water-column and stimulated a series of phytoplankton blooms, whereas during the winter, a weakly-stratified and deeply-mixed water-column led to a rapid decline in phytoplankton biomass under light-limited growth conditions. By incorporating pigment, photophysiological and optical data into a primary production model we show that daily, water-column primary production ranges from ∼160 mg C m⁻² d⁻¹ to 7600 mg C m⁻² d⁻¹. High water turbidity and deep vertical mixing, both separately and in concert, limit the light available for algal growth over much of the year. Annual primary production varied from 370 to 580 g C m⁻² y⁻¹. The relative influences of nutrient limitation and light limitation are assessed. A model is developed that describes this in an explicit manner using photophysiological parameters.  相似文献   

Effects of the copepod community structure on fecal pellet flux in Kagoshima bay,a deep,semi-enclosed embayment     

Toru Kobari  Hiroyasu Akamatsu  Masato Minowa  Toshihiro Ichikawa  Kazuo Iseki  Ryuji Fukuda  Masataka Higashi 《Journal of Oceanography》2010,66(5):673-684

Seasonal changes in the shape and size composition of fecal pellets were investigated with sediment trap samples from 50 and 150 m in Kagoshima Bay to evaluate how the mesozooplankton community affects fecal pellet flux. Deep vertical mixing was evident in March, and thermal stratification was developed above 50 m in June, August and November. Chlorophyll a, suspended particulate organic carbon (POC) and copepod abundance were uniform throughout the water column during the seasonal mixing and concentrated above 50 m in the stratified seasons. Calanoids were the most predominant copepods in March and poecilostomatoids composed more than 45% of the copepod community in June, August and November. Fecal pellet fluxes at 50 and 150 m were the highest in March, nearly half of POC flux. The relative contribution declined considerably in the other months, especially for less than 4% of POC flux in August. The decline was corresponded to the predominance of cyclopoids and poecilostomatoids. Cylindrical pellets dominated the fecal matters at both depths throughout the study period, while larger cylindrical pellets nearly disappeared at 150 m in June, August and November. Copepod incubation revealed that cylindrical and oval pellets were egested by calanoids and the other copepods, respectively. We suggest that cylindrical fecal pellets produced by calanoid copepods contribute to feces flux but the predominance of poecilostomatoids and/or cyclopoids decreases feces flux via the increase of oval pellets and fragmentation of larger cylindrical pellets.  相似文献