The curse of physiology—challenges and opportunities in the interpretation of geochemical data from mollusk shells     

Bernd R. Schöne 《Geo-Marine Letters》2008,28(5-6):269-285

Physiology corrupts geochemical records of mollusk shells in many ways, e.g., by actively controlling the incorporation of trace elements in the skeleton. However, the effects of variable biomineralization rates and growth cessation have largely remained unconsidered. Mediated by endogenous timekeeping mechanisms, mollusks stop growing skeletal material on a regular basis ranging from ultradian to annual timescales. During growth cessation, the shells do not record environmental conditions. Shell growth also stops when environmental conditions are beyond the physiological tolerance of the organism, e.g., above and below genetically determined, species-specific thermal extremes where shell growth slows and eventually ceases. Such growth disruptions can occur at non-periodic time intervals. Due to growth retardations and halts, proxy records of mollusk shells are thus incomplete, and reconstructed environmental amplitudes prone to truncation. Furthermore, environmental records are biased toward the physiological optimum of the animal. Favorable environmental conditions increase shell growth, whereas adverse environmental conditions result in reduced shell production and lowered overall metabolism. Not least, the duration of the growing season and overall growth rate decrease as the mollusk grows older. Mathematical modeling approaches can significantly improve proxy records obtained from mollusk shells. For example, if the duration of growth cessation is known, it may be possible to model the missing environmental record. It is also fairly easy to account for age-related growth trends, or variable time-averaging in different portions of the shell. However, a major premise for a reliable interpretation of proxy records from a mollusk shell or other organisms secreting biogenic hard parts is a proper understanding of the physiology, and of course, a high-resolution record of the many different environmental factors that may influence physiology and shell growth. The present paper reviews examples from the literature, and unpublished data on how physiology influences geochemical proxy records from mollusk shells, and presents methods how to eliminate such adverse effects.  相似文献   

An integrated approach to assess the ecological and chemical status of lakes with HOD/AHOD: a case study of two lakes     

Serdar G?NCü  Erdem ALBEK 《中国海洋湖沼学报》2019,37(1):146-159

The thermal strati?cation of the lakes impedes the transfer of atmospheric oxygen into the lower layers of the lake. In lakes which are af fected by diverse anthropogenic in?uences, the increasing organic matter amounts lead to a sharp decrease in hypolimnetic oxygen amounts, aided by thermal strati?cation,and anaerobic conditions arise. The determination of hypolimnetic oxygen demand(HOD) and areal hypolimnetic oxygen demand(AHOD) and their monitoring represent an integrated approach to investigate the oxygenation of lakes, the nutrient conditions, and the physicochemical dynamics. In this study, two lakes dif fering by size and af fected by dif ferent anthropogenic sources, are investigated in this respect. At?rst, bathymetric studies were conducted to determine the depth, surface area, and volume relationships.Then, based on monitoring studies conducted in 2013 and 2014, the thermal strati?cation dynamics and layer properties were established using the relative thermal resistance to mixing(RTRM) index based on temperature and density pro?les. Following this, the oxygen depletion rates were determined by oxygen and temperature pro?ling in the hypolimnion. For the years of 2013 and 2014, the AHOD values for the Borabey Pond which is far from anthropogenic in?uences, were found to be 0.848 and 0.569 g O 2/(m·d), respectively.The AHOD values for the Porsuk Reservoir which was overburdened for years by industrial and domestic pollution were found to be 4.263 and 5.099 g O 2/(m·d), larger than its counterpart by almost sevenfold. The HOD and AHOD monitoring can be considered to a valuable tool for assessing the ecological and chemical status of lakes within Annex 5 of the Water Framework Directive and as an integrated approach to assess and monitor the status of lakes.  相似文献   

The AquaDEB project (phase I): Analysing the physiological flexibility of aquatic species and connecting physiological diversity to ecological and evolutionary processes by using Dynamic Energy Budgets     

Marianne Alunno-Bruscia  Henk W. van der Veer  Sebastiaan A.L.M. Kooijman 《Journal of Sea Research》2009,62(2-3):43

The European Research Project AquaDEB (2007–2011, http://www.ifremer.fr/aquadeb/) is joining skills and expertise of some French and Dutch research institutes and universities to analyse the physiological flexibility of aquatic organisms and to link it to ecological and evolutionary processes within a common theoretical framework for quantitative bioenergetics [Kooijman, S.A.L.M., 2000. Dynamic energy and mass budgets in biological systems. Cambridge University Press, Cambridge]. The main scientific objectives in AquaDEB are i) to study and compare the sensitivity of aquatic species (mainly molluscs and fish) to environmental variability of natural or human origin, and ii) to evaluate the related consequences at different biological levels (individual, population, ecosystem) and temporal scales (life cycle, population dynamics, evolution). At mid-term life, the AquaDEB collaboration has already yielded interesting results by quantifying bio-energetic processes of various aquatic species (e.g. molluscs, fish, crustaceans, algae) with a single mathematical framework. It has also allowed to federate scientists with different backgrounds, e.g. mathematics, microbiology, ecology, chemistry, and working in different fields, e.g. aquaculture, fisheries, ecology, agronomy, ecotoxicology, climate change. For the two coming years, the focus of the AquaDEB collaboration will be in priority: (i) to compare energetic and physiological strategies among species through the DEB parameter values and to identify the factors responsible for any differences in bioenergetics and physiology; and to compare dynamic (DEB) versus static (SEB) energy models to study the physiological performance of aquatic species; (ii) to consider different scenarios of environmental disruption (excess of nutrients, diffuse or massive pollution, exploitation by man, climate change) to forecast effects on growth, reproduction and survival of key species; (iii) to scale up the models for a few species from the individual level up to the level of evolutionary processes.  相似文献   

Detecting anomalous CO₂ flux using space borne spectroscopy     

Prasun K. Gangopadhyay  Freek van der Meer  Paul van Dijk 《International Journal of Applied Earth Observation and Geoinformation》2009

Over the time-scale, earth's atmospheric CO₂ concentration has varied and that is mostly determined by balance among the geochemical processes including burial of organic carbon in sediments, silicate rock weathering and volcanic activity. The best recorded atmospheric CO₂ variability is derived from Vostok ice core that records last four glacial/interglacial cycles. The present CO₂ concentration of earth's atmosphere has exceeded far that it was predicted from the ice core data. Other than rapid industrialization and urbanization since last century, geo-natural hazards such as volcanic activity, leakage from hydrocarbon reservoirs and spontaneous combustion of coal contribute a considerable amount of CO₂ to the atmosphere. Spontaneous combustion of coal is common occurrence in most coal producing countries and sometimes it could be in an enormous scale. Remote sensing has already proved to be a significant tool in coalfire identification and monitoring studies. However, coalfire related CO₂ quantification from remote sensing data has not endeavoured yet by scientific communities because of low spectral resolution of commercially available remote sensing data and relatively sparse CO₂ plume than other geological hazards like volcanic activity. The present research has attempted two methods to identify the CO₂ flux emitted from coalfires in a coalmining region in north China. Firstly, a band rationing method was used for column atmospheric retrieval of CO₂ and secondly atmospheric models were simulated in fast atmospheric signature code (FASCOD) to understand the local radiation transport and then the model was implemented with the inputs from hyperspectral remote sensing data. It was observed that retrieval of columnar abundance of CO₂ with the band rationing method is faster as less simulation required in FASCOD. Alternatively, the inversion model could retrieve CO₂ concentration from a (certain) source because it excludes the uncertainties in the higher altitude.  相似文献   

Singular value decomposition and cluster analysis as regression diagnostics tools for geodetic applications     

Markus Vennebusch  Axel Nothnagel  Hansjörg Kutterer 《Journal of Geodesy》2009,83(9):877-891

It is well known that high-leverage observations significantly affect the estimation of parameters. In geodetic literature, mainly redundancy numbers are used for the detection of single high-leverage observations or of single redundant observations. In this paper a further objective method for the detection of groups of important and less important (and thus redundant) observations is developed. In addition, the parameters which are predominantly affected by these groups of observations are identified. This method thus complements other diagnostics tools, such as, e.g., multiple row diagnostics methods as described in statistical literature (see, e.g., Belsley et al. in Regression diagnostics: identifying influential data and sources of collinearity. Wiley, New York, 1980). The method proposed in this paper is based on geometric aspects of adjustment theory and uses the singular value decomposition of the design matrix of an adjustment problem together with cluster analysis methods for regression diagnostics. It can be applied to any geodetic adjustment problem and can be used for the detection of (groups of) observations that significantly affect the estimated parameters or that are of negligible impact. One of the advantages of the proposed method is the improvement of the reliability of observation plans and thus the reduction of the impact of individual observations (and outliers) on the estimated parameters. This is of particular importance for the very long baseline interferometry technique which serves as an application example of the regression diagnostics tool.  相似文献   

3D segmentation of single trees exploiting full waveform LIDAR data     

J. Reitberger  Cl. Schnörr  P. Krzystek  U. Stilla 《ISPRS Journal of Photogrammetry and Remote Sensing》2009,64(6):561-574

This paper highlights a novel segmentation approach for single trees from LIDAR data and compares the results acquired both from first/last pulse and full waveform data. In a first step, a conventional watershed-based segmentation procedure is set up, which robustly interpolates the canopy height model from the LIDAR data and identifies possible stem positions of the tallest trees in the segments calculated from the local maxima of the canopy height model. Secondly, this segmentation approach is combined with a special stem detection method. Stem positions in the segments of the watershed segmentation are detected by hierarchically clustering points below the crown base height and reconstructing the stems with a robust RANSAC-based estimation of the stem points. Finally, a new three-dimensional (3D) segmentation of single trees is implemented using normalized cut segmentation. This tackles the problem of segmenting small trees below the canopy height model. The key idea is to subdivide the tree area in a voxel space and to set up a bipartite graph which is formed by the voxels and similarity measures between the voxels. Normalized cut segmentation divides the graph hierarchically into segments which have a minimum similarity with each other and whose members (= voxels) have a maximum similarity. The solution is found by solving a corresponding generalized eigenvalue problem and an appropriate binarization of the solution vector. Experiments were conducted in the Bavarian Forest National Park with conventional first/last pulse data and full waveform LIDAR data. The first/last pulse data were collected in a flight with the Falcon II system from TopoSys in a leaf-on situation at a point density of 10 points/m². Full waveform data were captured with the Riegl LMS-Q560 scanner at a point density of 25 points/m² (leaf-off and leaf-on) and at a point density of 10 points/m² (leaf-on). The study results prove that the new 3D segmentation approach is capable of detecting small trees in the lower forest layer. So far, this has been practically impossible if tree segmentation techniques based on the canopy height model were applied to LIDAR data. Compared to a standard watershed segmentation procedure, the combination of the stem detection method and normalized cut segmentation leads to the best segmentation results and is superior in the best case by 12%. Moreover, the experiments show clearly that using full waveform data is superior to using first/last pulse data.  相似文献   

On the topographic bias in geoid determination by the external gravity field     

Lars E. Sjöberg 《Journal of Geodesy》2009,83(10):967-972

The topographic bias is defined as the error/bias committed by continuing the external gravity field inside the topographic masses by a harmonic function. We study the topographic bias given by a digital terrain model defined by a spherical template, and we show that the topographic bias is given only by the potential of an inner-zone cap, and it equals the bias of the Bouguer shell, independent of the size of the cap. Then we study the effect on the real Earth by decomposing its topography into a template, and we show also in this case that the topographic bias is that of the Bouguer shell, independent of the shape of the terrain. Finally, we show that the topographic potential of the terrain at the geoid can be determined to any precision by a Taylor expansion outside the Earth’s surface. The last statement is demonstrated by a Taylor expansion to fourth order.  相似文献   

Facies distribution and dissolution depths of surface sediment components from the Vema channel and the Rio Grande rise (southwest Atlantic Ocean)     

Marthe Melguen  Jörn Thiede 《Marine Geology》1974,17(5):341-353

Surface sediments from the Vema channel and from the Rio Grande rise (western extremity) contain less calcareous fossils with increasing water depth. The pteropodal (aragonite) lysocline corresponds to the 3200-m isobath. The pteropodal compensation depth is found above the lower boundary of the North Atlantic Deep Water: 3500 m. The planktonic foraminiferal lysocline (4050 m) seems to be very close to the abyssal thermocline and is therefore here the upper limit of the Antarctic Bottom Water. The foraminiferal and the coccolith compensation depths seem to coincide: 4500 m. Distribution and dissolution of calcareous sediment components are the same all around the western extremity of the Rio Grande rise (southern, western and northern flanks).  相似文献   

小气候、雪盖及土壤湿度对高山生态系统功能的影响   总被引：1，自引：0，他引：1  

Jorg LOFFLER 《地理学报(英文版)》2007,17(1):3-19

1 Introduction High mountain landscapes above the tree-line are often regarded as close to nature, although human impact has obviously changed the environment, partly exceeding its carrying capac- ity (L?ffler, 2000). Due to their fragility regarding expected environmental changes and an increasing land use pressure in many regions, high mountain landscapes recently became a major focus within the discussion on a sustainable development in a worldwide (Messerli and Ives, 1997), and regional p…  相似文献   

To conserve or not to conserve (mass in numerical models)     

György Hetényi 《地学学报》2014,26(5):372-376

Mass conservation is a fundamental physical law. Yet, computer models aiming to simulate Earth evolution commonly fail to respect it. Indeed, most geodynamic models implement phase transitions of rocks – such as metamorphism (solid–solid phase change) or melting (solid–liquid phase change) – following a simplifying assumption dating back to 1897 which is conserving volume rather than mass. The underlying problem is present at different scales, illustrated here by three examples: metamorphism in the continental crust, phase changes in the mantle transition zone and melt crystallization during columnar jointing. These illustrate that phase changes may become a driving force of a system's deformation and point to important differences with respect to simplified models. Developing and applying mass‐conserving approaches in future modelling tools are therefore not an option, but a necessity.  相似文献