水化硅酸钙动态力学性能的分子动力学模拟研究   总被引：2，自引：0，他引：2  

周继凯  金龙  陈徐东 《地震学刊》2014,(3):277-282

对水泥主要水化产物——水化硅酸钙的力学特性进行了分子动力学模拟。采用Hamid 1.1纳米托贝莫来石作为水化硅酸钙的初始结构,通过分子动力学模拟,获得水化硅酸钙的拉伸和压缩应力应变关系,并考虑了应变率和原子数对力学特性的影响。分子动力学模拟研究发现,计算峰值应力、峰值应变都较宏观试验结果高出很多;拉伸峰值应力较压缩峰值应力要小;峰值应力、峰值应变和弹性模量随着应变率的增加而增加,随着模拟晶胞体积（原子数）的增加而降低。研究表明采用分子动力学模拟能获得原子尺度水化硅酸钙动态力学性能,为揭示水泥基材料动态力学性能微观机理奠定了基础。  相似文献   

有机蒙脱石层间微结构的分子模拟     

魏景明  杨华明  朱建喜  沈伟  袁鹏  何宏平  陈鸣 《矿物岩石》2009,29(1)

采用分子动力学模拟方法,对舍烷基长链阳离子表面活性剂改性有机蒙脱石的层间域内分子环境及烷基长链排列状况进行模拟研究,并考察改性剂负载量与层间域含水量的改变对烷基链排列方式和活动性以及表面活性剂离子中N,C原子的分布状况的影响.1.0倍阳离子交换容量改性的有机蒙脱石在含少量水的情况下(干态),N,C原子均呈双层分布,表明烷基长链为双层平卧排列.含水量的提高(湿态)会导致烷基链从双层分布向在层闻域内均匀分布转变.2.0倍阳离子交换容量改性的有机蒙脱石在舍少量水的情况下(干态),烷基链呈双层倾斜分布于层间域内,烷基链的头部靠近四面体片层.含水量的提高(湿态)对烷基链在层间域内分布状态影响有限,但会导致烷基链整体向层间域中心平面移动,水分子优先占据靠近四面体片层的位置.  相似文献   

Removal of intertidal algae by herbivores in experimental frames and on shores near Auckland     

Penelope A. Luckens 《新西兰海洋与淡水研究杂志》2013,47(4):637-654

When grazing animals are excluded from any intertidal area algae grow unchecked. In screened frames on the shore where predation experiments are in progress such growth is undesirable. A number of shore herbivores were tested for their ability to remove such algal growth and prevent its reformation without interfering with the main experiments. Only the browsing species Lunella smaragda and Melagraphia aethiops were capable of removing large algal growths, and these species were acceptable food for some of the predatory species. The complex inter‐relationship between grazing species and shore zonation at several places near Auckland is discussed.  相似文献   

Pfiesteria shumwayae (Pfiesteriaceae) in New Zealand     

Lesley L. Rhodes  Joann M. Burkholder  Howard B. Glasgow  Parke A. Rublee  Coy Allen  Janet E. Adamson 《新西兰海洋与淡水研究杂志》2013,47(3):621-630

Pfiesteria shumwayae Steidinger et Burkholder is now known to be present in New Zealand and occurs in estuaries around the country. The presence of Pfiesteria was initially determined by a polymerase chain reaction (PCR)‐based detection assay, using oligonucleotide primers targeted at ribosomal DNA extracted from estuarine water and sediments. Presence was confirmed by isolation from fresh sediments in the presence offish (Oreochromis mossambicus), followed by identification by scanning electron microscopy. The New Zealand isolates of P. shumwayae were ichthyotoxic in bioassays, but there is no historic evidence offish kills in New Zealand associated with the dinoflagellate.  相似文献   

Investigating the molecular systematic relationships amongst selected Plesionika (Decapoda: Pandalidae) from the Northeast Atlantic and Mediterranean Sea     

Joana M da Silva  Antonina dos Santos  Marina R Cunha  Filipe O Costa  Simon Creer  Gary R Carvalho 《Marine Ecology》2013,34(2):157-170

Despite the high number of species and ecological diversity of pandalid shrimps, there has been no previous attempt to resolve evolutionary relationships of several genera using molecular tools. Although mitochondrial DNA cytochrome oxidase I (COI) is widely used in barcoding studies to delimit species boundaries, additional insights into phylogenetic affinities can be obtained, especially when used in combination with data from additional genes. The knowledge of molecular diversity is essential to understand phylogenetic relationships and will help systematic clarifications. Based on partial fragments of the 16S and COI genes, we have focused specifically on addressing the systematic relationships of the economically and ecologically important shrimp genus Plesionika within a framework of five genera from within the Pandalidae. Our results showed that species within Plesionika are substantially divergent when compared with other genera, exhibiting the highest average nucleotide divergence, with 0.1123 and 0.0846 in COI and 16S genes, respectively. In addition, sequence divergence was found to vary greatly within the genus Plesionika (COI/16S): 0.0247/0.0016 between Plesionika antigai and Plesionika heterocarpus and 0.1616/0.098 between Plesionika heterocarpus and Plesionika edwardsii. We did not find amino acid sequence divergence between P. heterocarpus and P. antigai compared with P. heterocarpus and P. edwardsii (8.10%, K2P distance). Three species of Plesionika (P. antigai, P. heterocarpus and Plesionika scopifera) appear well separated from other Plesionika species in both maximum likelihood and Bayesian analyses. The present study confirms the utility of COI over 16S as a genetic marker to resolve relationships between different species of Plesionika from the Northeast Atlantic and Mediterranean Sea, in addition to species delimitation. The findings highlight the need to further review paraphyly within Plesionika in an attempt to recognize a concordance in the evolutionary history of Plesionika with major ecological and geological events.  相似文献   

Population genetics of Sargassum horneri (Fucales, Phaeophyta) in China revealed by ISSR and SRAP markers     

于深辉  崇卓  赵凤娟  姚建亭  段德麟 《中国海洋湖沼学报》2013,31(3):609-616

Sargassum horneri is a common brown macro-alga that is found in the inter-tidal ecosystems of China. To investigate the current status of seaweed resources and provide basic data for its sustainable development, ISSR (inter simple sequence repeat) and SRAP (sequence related amplified polymorphism) markers were used to analyze the population genetics among nine natural populations of S. horneri. The nine studied populations were distributed over 2 000 km from northeast to south China. The percentage of polymorphic loci P% (ISSR, 99.44%; SRAP, 100.00%), Nei’s genetic diversity H (ISSR, 0.107-0.199; SRAP, 0.100-0.153), and Shannon’s information index I (ISSR, 0.157-0.291; SRAP, 0.148-0.219) indicated a fair amount of genetic variability among the nine populations. Moreover, the high degree of gene differentiation G st (ISSR, 0.654; SRAP, 0.718) and low gene flow N m (ISSR, 0.265; SRAP, 0.196) implied that there was significant among-population differentiation, possibly as a result of habitat fragmentation. The matrices of genetic distances and fixation indices (F st ) among the populations correlated well with their geographical distribution (Mantel test R=0.541 5, 0.541 8; P=0.005 0, 0.002 0 and R=0.728 6, 0.641 2; P=0.001 0, 0.001 0, respectively); the Rongcheng population in the Shandong peninsula was the only exception. Overall, the genetic differentiation agreed with the geographic isolation. The fair amount of genetic diversity that was revealed in the S. horneri populations in China indicated that the seaweed resources had not been seriously affected by external factors.  相似文献   

Culture observation and molecular phylogenetic analysis on the blooming green alga Chaetomorpha valida (Cladophorales, Chlorophyta) from China     

邓蕴彦  汤晓荣  詹子锋  滕林宏  丁兰平  黄冰心 《中国海洋湖沼学报》2013,31(3):552-559

The marine green alga Chaetomorpha valida fouls aquaculture ponds along the coastal cities of Dalian and Rongcheng, China. Unialgal cultures were observed under a microscope to determine the developmental morphological characters of C. valida. Results reveal that gametophytic filaments often produce lateral branches under laboratory culture conditions, suggesting an atypical heteromorphic life cycle of C. valida between unbranched sporophytes and branched gametophytes, which differs from typical isomorphic alternation of Chaetomorpha species. The shape of the basal attachment cell, an important taxonomic character within the genus, was found variable depending on environmental conditions. The 18S rDNA and 28S rDNA regions were used to explore the phylogenetic affinity of the taxa. Inferred trees from 18S rDNA sequences revealed a close relationship between C. valida and Chaetomorpha moniligera. These results would enrich information in general biology and morphological plasticity of C. valida and provided a basis for future identification of green tide forming algae.  相似文献   

Cloning and expression analysis of vasa during the reproductive cycle of Korean rockfish, Sebastes schlegeli     

MU Weijie  WEN Haishen  HE Feng  LI Jifang  LIU Miao  MA Ruiqin  ZHANG Yuanqing  HU Jian  QI Baoxia 《中国海洋大学学报(英文版)》2013,12(1):115-124

  相似文献   

基于16S rRNA 部分序列探讨部分鳚亚目鱼类的分子系统进化关系   总被引：1，自引：0，他引：1  

张源真  王伟  姜志强  张钊 《海洋科学》2012,36(9):89-95

通过PCR扩增获得了3科5属6种中国黄渤海海域的鳚亚目(Blennioidei)鱼类的线粒体16S rRNA基因序列片段约669bp碱基,结合来自 GenBank的5种鳚亚目其他科鱼类的相应基因片段,并以眼斑雪冰鱼(Chionodraco rastrospinosus)为外群,生成供系统发育分析的序列矩阵,利用MEGA 4.0软件分析序列的碱基组成、差异百分比、转换/颠换值等,应用最大简约法(MP)和邻接法(NJ)构建系统发育树.结果显示:在鳚亚目鱼类的16S rRNA 片段生成的序列矩阵中发现有碱基的插入缺失现象,共有207 bp变异位点,转换/颠换值为0.8,碱基平均差异为3.36;支持绵鳚(Enchelyopus elongates)归于鳚亚目绵鳚科(Zoarcidae),鳚(Azuma emmnion)归于鳚亚目线鳚科(Stichaeidae);方氏云鳚(Enedrias fangi)和云鳚(Enedrias nebulosus)种间遗传距离只有0.01,亲缘关系最近.  相似文献   

三种海洋浮游微藻的分子鉴定及培养条件研究     

徐娜  逄少军 《海洋科学》2012,36(10):13-25

采用分子生物学手段结合形态特征对海洋中生活着的浮游单细胞海藻进行准确无误的分类鉴定,正在成为一种普遍接受的方式。这样做的前提是首先需要从海水中分离得到纯藻株, 掌握它们的生活条件, 获得生物量, 并进而完成鉴定。作者对一株裸甲藻类似种和两株新分离的赤潮单细胞海藻进行了分离、培养和鉴定。核糖体18S RNA 基因(18S rDNA)和转录单元内间隔区(ITS)序列分析结果显示这三株藻分别为共生甲藻(Symbiodinium sp.)、锥状斯氏藻(Scrippsiella trochoidea)和赤潮异弯藻(Heterosigma akashiwo)。作者以广泛使用的光密度值A₆₈₀作为衡量藻体生物量变化的指标, 研究了这三种藻在不同培养条件下的生长。结果表明, 在批次培养中, 共生甲藻、锥状斯氏藻和赤潮异弯藻的生物量都在22℃达到最大, 分别为9.28×10⁵个/mL、7.9×10⁴个/mL 和4.75×10⁵个/mL; 强光和长时间光照促进生长, 但锥状斯氏藻在强光下更早进入衰退期; 三种藻都表现出较强耐受盐度变化的能力,在盐度为15～36 的培养液中生长良好; 营养实验表明, 使用882 μmol/L 的NO₃^- 和36.2 μmol/L 的PO₄^3-能够维持三种海藻的快速生长。  相似文献