Cloning of cytochrome P450 1A (CYP1A) genes from the hermaphrodite fish Rivulus marmoratus and the Japanese medaka Oryzias latipes     

Kim IC  Kim YJ  Yoon YD  Kawamura S  Lee YS  Lee JS 《Marine environmental research》2004,58(2-5):125-129

To use two small fish Rivulus marmoratus (Cyprinodontiformes, Rivulidae) and the Japanese medaka Oryzias latipes (Belloniformes) as testing models in molecular ecotoxicology, we have cloned the cytochrome P450 1A (CYP1A) gene after screening of both genomic DNA libraries, and sequenced 11,863 and 7,243 bp including all the exons and introns with promoter regions, respectively. The Rivulus and the medaka CYP1A gene consisted of seven exons (including non-coding exons) with high homology to mammals. In the promoter region, Rivulus CYP1A gene has seven xenobiotic response elements (XREs) and two metal response elements (MREs), while the Japanese medaka CYP1A gene has six XREs and four MREs. Interestingly, medaka CYP1A gene has a number of MREs at the promoter, which may affect its response on metal exposure. We describe here the gene structure of both fish CYP1A genes.  相似文献   

Turbulent structure in water under laboratory wind waves     

Ikuo Yoshikawa  Hiroshi Kawamura  Kuniaki Okuda  Yoshiaki Toba 《Journal of Oceanography》1988,44(3):143-156

The structure of the turbulent boundary layer underneath laboratory wind waves was studied by using a combination of a high-sensitivity thermometer array with a two-component sonic flowmeter. The temperature fluctuations are used to detect movements of water parcels, with temperature as a passive quantity. The turbulence energy was dominant in the frequency range (0.01 0.1 Hz), which was much smaller than the wind-wave frequency (2 5 Hz), and in which the turbulence was anisotropic. There was a frequency range (0.2 2 Hz for velocity, 0.2 5 Hz for temperature fluctuation) where the turbulence was isotropic and had a –5/3 slope in the energy spectrum. These points are the same as those in previous works. However, by analyses of the time series by using a variable-interval time-averaging technique (VITA), it has been found that conspicuous events in this main turbulence energy band are the downward bursting from the vicinity of the water surface. Thus the structure of the water layer underneath the wind waves has characters which are similar to the familiar turbulent boundary layer over a rough solid wall, as already conceived. It has been found that, at the same time, the turbulence energy can be related to quantities of the wind waves (the root mean squared water level fluctuation and the wave peak frequency), for different wind and wave conditions. That is, the turbulence underneath the wind waves develops under a close coupling with the wind waves.  相似文献   

The Formation and Circulation of the Intermediate Water in the Japan Sea   总被引：1，自引：0，他引：1  

Jong-Hwan Yoon  Hideyuki Kawamura 《Journal of Oceanography》2002,58(1):197-211

In order to clarify the formation and circulation of the Japan/East Sea Intermediate Water (JESIW) and the Upper portion of the Japan Sea Proper Water (UJSPW), numerical experiments have been carried out using a 3-D ocean circulation model. The UJSPW is formed in the region southeast off Vladivostok between 41°N and 42°N west of 136°E. Taking the coastal orography near Vladivostok into account, the formation of the UJSPW results from the deep water convection in winter which is generated by the orchestration of fresh water supplied from the Amur River and saline water from the Tsushima Warm Current under very cold conditions. The UJSPW formed is advected by the current at depth near the bottom of the convection and penetrates into the layer below the JESIW. The origin of the JESIW is the low salinity coastal water along the Russian coast originated by the fresh water from the Amur River. The coastal low salinity water is advected by the current system in the northwestern Japan Sea and penetrates into the subsurface below the Tsushima Warm Current region forming a subsurface salinity minimum layer. This revised version was published online in August 2006 with corrections to the Cover Date.  相似文献   

Validation and Improvement of Satellite-Derived Surface Solar Radiation over the Northwestern Pacific Ocean     

Kawai  Yoshimi  Kawamura  Hiroshi 《Journal of Oceanography》2005,61(1):79-89

The purpose of this study is to validate and improve satellite-derived downward surface shortwave radiation (DSSR) over the northwestern Pacific Ocean using abundant in situ data. The DSSR derivation model used here assumes that the reduction of solar radiation by clouds is proportional to the product of satellite-measured albedo and a cloud attenuation coefficient. DSSR is calculated from Geostationary Meteorological Satellite-5/Visible Infrared Spin-Scan Radiometer data in 0.05° × 0.05° grids. The authors first compare the satellite DSSR derived with a cloud attenuation coefficient table determined in past research with in situ values. Although the hourly satellite DSSR agrees well with land in situ values in Japan, it has a bias of +13∼+34 W/m² over the ocean and the bias is especially large in the low latitudes. The authors then improve the coefficient table using the ocean in situ data. Usage of the new table successfully reduces the bias of the satellite DSSR over the ocean. The cloud attenuation coefficient for low-albedo cases over the ocean needs to be larger in the low latitudes than past research has indicated. Daily and hourly DSSR can be evaluated from the satellite data with RMS errors of 11–14% and 30–33%, respectively, over a wide region of the ocean by this model. It is also shown that the cloud attenuation coefficient over land needs to be smaller than over the ocean because the effect of the radiation reflected by the land surface cannot be ignored.  相似文献   

Effects of scattering and resonance on energy dissipation of an internal tide in a narrow shelf     

Yuji Kawamura  Yujiro Kitade 《Journal of Oceanography》2007,63(1):15-25

The effects of scattering and resonance on the energy dissipation of an internal tide were investigated using a two-dimensional model which is a reassembled version of the theoretical generation model devised by Rattray et al. (1969) for internal tide. The basic character of the scattering process at the step bottom was first investigated with a wide shelf model. When the internal wave incited from a deep region (Region II) into the shallow shelf region (Region I), a passing wave into the shallow region, a reflected wave into the deep region, and a beam-like wave, i.e. a scattered wave (SW), emanated at the step bottom. The SW, which consists of the superposition of numerous internal modes, propagated upward/downward into both regions. The general properties of the SW were well expressed around the shelf edge, even in the present model with viscosity effect. The amplitude of the SW decreased dramatically when the depth of the velocity maximum of the incident internal wave in Region II corresponded with the depth of the shelf edge. In the narrow shelf model, where the decay distance of the internal wave in Region I is longer than the shelf width, the incident internal wave reflected at the coast to form a standing wave. When the internal wave in Region I is enhanced by the resonance, the energy of the SW in Region II is also intensified. Furthermore, the energy of the modes in Region II predominated when the velocity maximum is identical to that of the dominant mode in Region I. These results suggest that the spatial scale of shelf region is a very important factor governing the energy dissipation of the internal tide through reflection and scattering in a narrow shelf.  相似文献   

Three-dimensional numerical experiments on tidal exchange through a narrow strait in a homogeneous and a stratified sea     

Norihisa Imasato  Shinzou Fujio  Qian Zhang  Toshiyuki Awaji  Kazunori Akitomo 《Journal of Oceanography》1994,50(2):119-139

We have investigated the three-dimensional Lagrangian motion of water particles related with tidal exchange between two basins with a constant depth connected through a narrow strait and the effects of density stratification on the exchange processes by tracking a number of the labeled particles. Tide-induced transient eddies (TITEs), which are similar to those in two-dimensional basin, are generated behind the headlands. Upwelling appears around the center of the eddy and sinking around the boundary. When the basins are filled with homogeneous water, a pair of vortices are produced in the vertical cross section of the strait due to bottom stress, with upwellings along the side walls of the strait and sinking in the center of the strait. These circulations form the horizontally convergent field in the cross-strait direction in the upper layers while the horizontal divergence takes place in the bottom layer. These vertical water-motions produce the three-dimensional distribution of velocity shear and phase lag of the tidal current around the strait, and the Lagrangian drifts of water particles become large. As a result, water exchange through the strait is greatly enhanced: The water exchange rate reaches 94.1% which is much larger than that obtained in the vertically integrated two-dimensional model. When the basins are stratified, the stable stratification suppresses the vertical motion so that a pair of vertical vortices are confined in the lower layers. This leads to a decrease in the exchange rate, down to 88.6%. Our numerical results show that the three-dimensional structure of tidal currents should be taken into account in tidal exchange through a narrow strait.  相似文献   

Study on the currents in Lake Biwa (I)     

Norihisa Imasato  Seiichi Kanari  Hideaki Kunishi 《Journal of Oceanography》1975,31(1):15-24

Some numerical experiments by the barotropic nonlinear two dimensional models are performed to study the water circulations in Lake Biwa, especially to study the large anticlockwise gyre in the north basin. The wind fields used in the experiments have no rotational component. This gyre is induced by the southerly wind and is approximately on the geostrophic balance. The vorticity of this gyre is contributed from the vertical stretching of the vortex tube by the variable bottom topography and the inertia term. But the latter term does not become effective if the bottom profile of the basin is flat. Therefore the horizontal circulation in the barotropic closed basin is the “topographic gyres”. The bottom stress has a little contribution to the vorticity balance of the gyre.  相似文献   

A complementary note on “nonlinearity of the horizontal velocity field under wind-waves”     

Norihisa Imasato  Hiroshi Ichikawa 《Journal of Oceanography》1977,33(6):340-341

  相似文献   

The mechanism of the development of wind-wave spectra     

Norihisa Imasato 《Journal of Oceanography》1976,32(6):253-266

The mechanism of the development of wind-waves will be proposed on the basis of the observed wave spectra in the wind tunnels and at Lake Biwa (Imasato, 1976). It consists of two aspects: One is that the air flow over the wind-waves transfers momentum concentratively to the steepest component waves and the other is that the upper limit of the growth of a wave spectral density is given by the ultimate value in the slope spectral density. The first aspect means that the wave field has the momentum transfer filter on receiving the momentum from the air flow. Wind-waves in the stage of sea-waves receive the necessary amount of momentum by the form drag,e.g. according to the Miles' (1960) inviscid mechanism, through a very narrow frequency region around a dominant spectral peak. On the other hand, wind-waves in the stage of initial-wavelets receive it according to the Miles' (1962a) viscous model through a fairly broad frequency region around the peak. The upper limit ofS _max developing according to viscous mechanism is given byS _max =6.40×10^–4 k _max ^–2cm²s andS _max =2.03C(f _max )^–2cm²s(S _max is the power density of the wave spectral peak with the frequencyf _max ,k _max is the wave number corresponding to the frequencyf _max andC is the phase velocity).From the second aspect, the upper limit of the growth of wave spectral density is given by 33.3f ^–4cm²s in the frequency region of late stage of sea-waves. Therefore, the spectral peak, which has the largest value in the slope spectral density in the component waves of the wave spectrum, rises high over the line 4.15f ^–5cm²s. The energy is transported from the spectral peak to the high frequency part and to the forward face of a wave spectrum by nonlinear wave-wave interaction. This nonlinearity is confirmed by the bispectra calculated from the observed wind-wave data. In the stage of sea-waves, nonlinear rearrangement of the wave energy comes from a narrow momentum transfer filter, and, in the stage of initial-wavelets, it comes mainly from small corrugations and small steepness of the wave field.  相似文献   

Outbreak of warm water from the Kuroshio South of Japan     

Y. Toba  H. Kawamura  K. Hanawa  H. Otobe  K. Taira 《Journal of Oceanography》1991,47(6):297-303

During the concentrated observation (April–May 1988) conducted as a part of the Ocean Mixed Layer Experiment (OMLET) in the sea area south of Japan, a conspicuous outbreak of warm water occurred from the large-meander region of the Kuroshio toward the southwest in the direction of the former Ocean Weather Station “T”. A series of NOAA-AVHRR infrared images clearly showed the process of this event. A surface buoy-mooring system deployed in this experiment recorded the arrival of this outbreak of water, in terms of the rise of sea-surface temperature (SST) of 1.5°C and the flow of warm water of 1.5kt toward the northwest at “T”. We studied this phenomenon by combining time series of infrared SST images with the oceanographic data obtained by two research vessels. The warm water was about 100 m deep in the section at 137°E along the edge of the Off-Shikoku Warm Water. It was estimated that about twenty outbreaks of this kind in a year can compensate a large heat loss to the atmosphere above this ocean region.  相似文献