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In order to find out whether long interspersed elements (LINEs) existed in macro-algae ge- nomes or not, we tested the LINE homologues in representative families (species): Gracilaria (G. eucheumoides Harv., G. tenuistipitata Chang et Xia, and G. textorii (Sur) De-Toni), Laminaria (L. longis- sima Miyabe and L. japonica Aresch.), and Ulva (U. lactuca L. and U. pertusa Kjellm.) during 2004 to 2005. Polymerase Chain Reaction (PCR) was carried out with degenerate oligonucleotide primers de- signed from LINEs of rice homologues and Cin4 of maize. Cloning and nucleotide sequencing of the PCR products revealed that 4 clones that derived from 3 species of Gracilaria have LINE homologues. The nucleotide sequences of the 4 LINE homologues diverged greatly, but the amino acid sequences deduced from them were relatively conserved. The endonuclease regions of the LINE homologues greatly di- verged from that of other plants, but they had closer phylogenetic relationship to Zepp elements in Chlor- ella sp., which indicated that sequence divergence by vertical transmission has been a major influence on the evolution of algal LINEs. 相似文献
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psbA基因编码光合系统Ⅱ反应中心的D1蛋白,是叶绿体基因组中一个重要的光调控基因.根据网管藻(Dictyosiphon foeniculaceus)、髋藻(Myelophycus simplex)、粗粒藻(Asperococcus fistulosus)、索藻(Chordaria flagelliformis)、点叶藻(Punctaria latifolia)、水云(Ectocarpus siliculosus)、铁钉菜(Ishige okamurae)、绳藻(Colpomenia sinuosa)、网胰藻(Hydroclathrus clathratus)、幅叶藻(Petalonia fascia)等10种藻类的psbA基因高度保守序列,设计引物,利用PCR方法从冈村枝管藻(Cladosiphon okamuranus)基因组DNA中扩增出约750 bp的片段,将该片段连接到pMD18-T载体上进行序列测定.结果表明:片段长度为737bp,推导的245个氨基酸序列与网管藻、髋藻、粗粒藻、索藻、点叶藻、水云、铁钉菜、绳藻、网胰藻、幅叶藻的D1蛋白相对应的氨基酸序列的同源性均高于96%.该基因序列已被GenBank收录,登录号为EU332142. 相似文献
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