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JD Klein AE Bester-van der Merwe ML Dicken A Emami-Khoyi KL Mmonwa 《African Journal of Marine Science》2019,41(1):115-118
Genomic data can be a useful tool in the management and conservation of biodiversity. Here, we report the development of genomic resources for the spotted ragged-tooth shark Carcharias taurus using genome-wide DNA data from Illumina next-generation sequencing. We explored two commonly used genetic marker types: microsatellites and mitochondrial DNA. A total of 4 394 putative microsatellites were identified, of which 10 were tested on 24 individuals and found to have ideal properties for population genetic analyses. Additionally, we reconstructed the first complete mitochondrial genome of a South African spotted ragged-tooth shark, and highlight the most informative gene regions to facilitate future primer design. The data reported here may serve as a resource for future studies and can ultimately be applied in the sustainable conservation and fisheries management of this apex predator. 相似文献
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Aspects of sea-bed structure and benthic-macroinvertebrate species composition, distribution, richness and diversity in coastal waters off eastern Waiheke Island, Hauraki Gulf, are reported. In contrast to the sole historical account of sea-bed community structure from this same region, no widely distributed assemblages of species are recognised throughout it; no two sites share the exact same complement of species; and almost all sites are less than 80% similar in their taxonomic composition, most considerably so. Species richness and diversity are reported to vary with substratum type and depth, and spatially; species occurring within muds are the least diverse and species rich, followed by those of muddy gravels, and then gravels; many taxa prove common to the three substratum types; and dominance of taxa is recognised to decrease with an increase in substratum complexity, from muds to gravels, and species richness. With the exception of invasive marine species, apparent changes in the composition of assemblages throughout this region over the eight-decade period that data span are considered artefacts of the way in which such assemblages were historically defined. We recommend historical accounts of sea-bed community distributions throughout Hauraki Gulf be interpreted with caution, especially when attempting to use such schematic depictions to determine whether changes have occurred in assemblage composition. 相似文献
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Modern foraminiferal assemblage zones can be used to reconstruct palaeo sea levels when applied to fossil foraminifera down a sediment core. Previous intertidal foraminiferal studies have predominantly focused on assemblages in surface sediments (0–1 cm), with the rationale that surface assemblages reflect the modern-day environment. Foraminifera live infaunally and therefore there is a need to document the infaunal vertical distribution of living foraminifera to fully capture the modern environment. Infaunal foraminiferal populations may compositionally differ from or be similar to those in the uppermost 1 cm of a core sample, but abundance is variable vertically, making it very complex to reconstruct and interpret past sea levels. This can have implications for the choice of assemblages to use as modern analogues for past sea-level reconstructions. This study documents the vertical infaunal distribution of living foraminifera, to allow for more informed interpretations of palaeo-reconstructions in mangrove environments. The down-core vertical distribution and abundance of living foraminifera, along with grain size and organic content, were documented using sediment cores along an elevational transect. Nine taxa were recorded as living at the time of collection, six of which were restricted to the top 4 cm. The majority of these were calcareous and found in the cores situated closer to the intertidal channel. Therefore, we argue that the diversity of living calcareous and agglutinated foraminifera could be restricted by grain size, with coarser grain sizes associated with lower species diversity. The findings suggest that foraminiferal species inhabiting the top 4 cm represent deeper living foraminiferal populations. Therefore, the top 4-cm interval can be used to establish a modern training set upon which reconstructions can be based. The findings from this study will provide guidance on the use of South African mangrove environments for future sea-level reconstructions. 相似文献
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V. TENCZER C. A. HAUZENBERGER H. FRITZ G. HOINKES S. MUHONGO U. KLÖTZLI 《Journal of Metamorphic Geology》2011,29(5):537-560
Meta‐anorthosite bodies are typical constituents of the Neoproterozoic Eastern Granulites in Tanzania. The mineral assemblage (and accessory components) is made up of clinopyroxene, garnet, amphibole; scapolite, epidote, biotite, rutile, titanite, ilmenite and quartz. Within the feldspar‐rich matrix (70–90% plagioclase), mafic domains with metamorphic corona textures were used for P–T calculations. Central parts of these textures constitute high‐Al clinopyroxene – which is a common magmatic mineral in anorthosites – and is therefore assumed to be a magmatic relict. The clinopyroxene rims have a diopsidic composition and are surrounded by a garnet corona. Locally the pyroxene is surrounded by amphibole and scapolite suggesting that a mixed CO2–H2O fluid was present during their formation. Thermobarometric calculations give the following conditions for the metamorphic peak of the individual meta‐anorthosite bodies: Mwega: 11–13 kbar, 850–900 °C; Pare Mountains: 12–14 kbar, 850–900 °C; Uluguru Mountains: 12–14 kbar, 850–900 °C. The P–T evolution of these bodies was modelled using pseudosections. The amount and composition of the metamorphic fluid and <0.5 mol.% fluid in the bulk composition is sufficient to produce fluid‐saturated assemblages at 10 kbar and 800 °C. Pseudosection analysis shows that the corona textures most likely formed under fluid undersaturated conditions or close to the boundary of fluid saturation. The stabilities of garnet and amphibole are dependent on the amount of fluid present during their formation. Mode isopleths of these minerals change their geometry drastically between fluid‐saturated and fluid‐undersaturated assemblages. The garnet coronae developed during isobaric cooling following the metamorphic peak. The cooling segment is followed by decompression as indicated by the growth of amphibole and plagioclase. The estimated of the metamorphic fluid is ～0.3–0.5. Although the meta‐anorthosites have different formation ages (Archean and Proterozoic) they experienced the same Pan‐African metamorphic overprint with a retrograde isobaric cooling path. Similar P–T evolutionary paths are known from the hosting granulites. The presented data are best explained by a tectonic model of hot fold nappes that brought the different aged anorthosites and surrounding rocks together in the deep crust followed by an isobaric cooling history. 相似文献
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The Marine Living Resources Act (MLRA), which was enacted in 1998, is the primary legislation addressing South Africa's marine fisheries. In June 2012, another important instrument, the Policy for the Small Scale Fisheries Sector (SSFP) in South Africa, was adopted to rectify the exclusion of many small-scale fishers from access to resources, that had resulted from weaknesses in the MLRA. This paper assesses the MLRA, aspects of the SSFP and selected other subsidiary policies and regulations in relation to current best-practices, especially the extent to which they support an ecosystem approach to fisheries (EAF). The study concludes that there are some serious gaps and shortcomings in the MLRA that should be addressed. These include, among others, the need to: (i) revise the MLRA so as to incorporate requirements for open and transparent management and governance; (ii) entrench the principles of co-management, emphasised in the SSFP, for all fisheries; and (iii) include a legal requirement for detailed management plans for all fisheries. Despite these shortcomings, there has been considerable progress in implementation of EAF, at least in the country's bigger fisheries. However, this should not be seen as a justification for avoiding or delaying a revision of the MLRA to bring it into line with modern best-practices as encompassed by EAF. 相似文献
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THE ROLE OF ATMOSPHERIC CIRCULATION PATTERNS IN AGROCLIMATE VARIABILITY IN FINLAND, 1961–2011 
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下载免费PDF全文 MASOUD IRANNEZHAD DELIANG CHEN BJØRN KLØVE 《Geografiska Annaler: Series A, Physical Geography》2016,98(4):287-301
This study evaluates interannual variations and trends in growing season daily temperature sum and daily precipitation sum in Finland during 1961–2011, and their connections to well known atmospheric circulation patterns. Changes in summer (June–August) climate partially explain changes in growing season daily temperature sum and daily precipitation sum over Finland, which naturally decreased from south to north. On a national scale, growing season warmed and became wetter during 1961–2011, as growing season daily temperature sum and daily precipitation sum significantly (p < 0.05) increased by 5.01 ± 3.17°C year–1 and 1.39 ± 0.91 mm year–1, respectively. The East Atlantic pattern was the most influential atmospheric circulation pattern for variations in growing season daily temperature sum (rho = 0.40) across Finland and the East Atlantic/West Russia pattern was most influential for growing season daily precipitation sum variability (rho = –0.54). There were significant (p < 0.05) increasing trends in growing season daily temperature sum and daily precipitation sum throughout Finland during 1961–2011. Increased growing season daily temperature sum was mainly observed in northern, central, western, eastern and coastal areas of south‐western Finland. This warming was positively associated with the East Atlantic pattern in the north, centre and south, but negatively associated with the East Atlantic/West Russia pattern in eastern Finland. Increased GSP mostly occurred in southern, eastern, western, central, northern and north‐western Finland. These wetting trends were positively correlated with the East Atlantic pattern in the north and negatively correlated with the Polar pattern in the south and the East Atlantic/West Russia pattern in the east, west, centre and north‐east of Finland. The overall agroclimatic year‐to‐year variability in Finland between 1961 and 2011 was mostly linked to variations in the East Atlantic and East Atlantic/West Russia patterns. 相似文献
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Global climatic oscillations have shaped the contemporary genetic structure of marine taxa in different ways. Previous demographic studies have indicated that various intertidal marine species display genetic signatures of demographic expansion that either pre- or postdate the Last Glacial Maximum. Such expansions and the ability of species to colonise new habitats will influence their genetic structure, but the link between scales of larval dispersal and the strength of phylogeographic structure is not always clear. We analysed a fragment of the mitochondrial COI gene of 11 sympatric species of intertidal southern African patellid limpets to investigate how ancient oceanographic dynamics have shaped and maintained their contemporary spatial genetic variation. Our data show that the patellid limpets investigated display congruent evidence of spatial expansion during the Late Pleistocene or Early Holocene, which corresponds with the establishment of the contemporary southern African shoreline. We argue that closely related and co-distributed southern African intertidal invertebrates responded to ancient climatic oscillations as a cohesive group. In contrast, contemporary oceanographic circulation has shaped the phylogeographic patterns of these limpets in different ways. We show close relationships between phylogeography and biogeography for some species, but not for others, despite the similarities in their life histories and exposure to the same climatic changes. 相似文献
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