Habitability analyses of aquatic bacteria     

Md. Nurul Haider  Masahiko Nishimura  Minoru Ijichi  Ching-chia Yang  Wataru Iwasaki  Kazuhiro Kogure 《Journal of Oceanography》2018,74(2):197-207

Habitability is defined as an ability of an organism to inhabit different environments. Habitability of organisms, however, cannot be inferred from analyses such as a whole genome or community structures. A recently developed database, the MetaMetaDB, gives us information from what kind of environments one particular 16S rRNA sequence data has ever been obtained, and thus enables us to infer the habitability of the bacterium in question. In order to check the applicability of this database to study the habitability of aquatic bacteria, samples collected at two Naka River stations, one estuarine station from Naka River Estuary, two coastal stations at Oarai in Ibaraki Prefecture, Japan and one station in the Kuroshio Current of the western North Pacific were examined. The phylotypes were tracked against the MetaMetaDB and it was reasonably found that the low-salinity stations were dominated by sequences with “freshwater and groundwater”, “human” and “wastewater” habitat identities, while the high-salinity stations were dominated by those with a “marine” identity. The phylotypes of low-salinity stations with a particular habitat identity were absent or rare in the high-salinity stations and vice versa. The MetaMetaDB also showed that sequences of Cyanobacteria or related phylogenetic groups may be present in the human gut, as well as the probable distribution of the relatives (ancestors/descendants/siblings) of some bacteria. These overall findings proved that the MetaMetaDB is useful as a new tool to infer microbial habitability and it gives us new information on the possible origin and ecology of microorganisms in the environments.  相似文献   

Hysteresis and Surface Shear Stresses During Snow-Particle Aeolian Transportation     

Niiya  Hirofumi  Nishimura  Kouichi 《Boundary-Layer Meteorology》2022,183(3):447-467

Boundary-Layer Meteorology - Surface shear stresses produced by wind and particle collision play a key role in aerodynamic entrainment and splash processes. The fluid shear stress at the surface...  相似文献   

Pore-water pressure development in a frozen saline clay under isotropic loading and undrained shearing     

Lyu  Chuangxin  Nishimura  Satoshi  Amiri  Seyed Ali Ghoreishian  Zhu  Feng  Eiksund  Gudmund Reidar  Grimstad  Gustav 《Acta Geotechnica》2021,16(12):3831-3847

Acta Geotechnica - A systematical testing program on frozen Onsøy clay under isotropic loading and undrained shearing at different temperatures...  相似文献   

Postglacial stratigraphic evolution of a current-influenced sandy shelf: offshore Kujukuri strandplain,central Japan     

Naohisa Nishida  Taku Ajioka  Ken Ikehara  Rei Nakashima  Hajime Katayama  Tomoyuki Sato  Seishiro Furuyama  Toru Tamura 《Sedimentology》2020,67(1):559-575

Sandy shelf sediments are important elements of clastic sedimentary systems because of their wide distribution in the geological record and their significance as hydrocarbon reservoirs. Although many studies have investigated shelf sediments influenced by waves or tidal currents, little is known about shelf sediments influenced by oceanic currents, particularly their lithofacies characteristics and stratigraphic evolution. This study investigated the stratigraphic evolution of shelf sediments off the Kujukuri strandplain facing the Pacific Ocean, which is influenced by the strong Kuroshio Current. Sediment cores were obtained from six locations on the Kujukuri shelf (34 to 124 m water depth) using a vibrocorer. The dominant lithofacies is mud-free sand with low-angle cross-lamination associated with alternating beds of finer and coarser sand with cross-lamination. These display depositional processes influenced by storm waves and the Kuroshio Current, respectively. This finding is consistent with the previously presented modern and historical observations of the Kuroshio Current and estimates of the storm-wave base. Radiocarbon dates show that the sediment succession formed during the last transgressive and highstand stages after 13·1 ka. The depositional processes during the stages represent a transition from storm waves with abundant sediment supply to both storm waves and the Kuroshio Current with sediment starvation mainly due to its trapping in the strandplain. Comparison to other Holocene–Modern shelf systems suggests that the sandy shelf successions are strongly influenced by oceanic currents under conditions of limited riverine input and open coastal geometry. The resultant sand-dominated succession is characterized by reversal of the proximal to distal grain-size trend compared to the fining for most other recognized wave/storm-dominated shelf successions. This is because of seaward increase in the influence of the Kuroshio Current. Thus, shelf deposits are naturally complex, and these may be further complicated by the additional influence of oceanic currents above the usual wave-dominated and tide-dominated end members.  相似文献   

东亚地区春季二氧化硫的输送与转化过程研究I.模式及其验证   总被引：5，自引：0，他引：5  

张美根  徐永福  Itsushi Uno  Hajime Akimoto 《大气科学》2004,28(3):321-329

结合新近评估的东亚地区污染源资料,作者利用一个耦合的区域化学输送模式系统以探讨东亚地区春季期间气象过程、气相与液相化学过程、非均相化学过程、气溶胶过程和干湿沉降过程对二氧化硫输送及转化过程的影响,并研究二氧化硫和硫酸盐气溶胶的空间分布及变化特征.模拟的二氧化硫和硫酸盐气溶胶的浓度值与2001年春季飞机和地面获取的观测值进行了比较.比较结果显示,模拟值与观测值具有很好的一致性,模式系统很好地反映了二氧化硫和硫酸盐气溶胶的分布特征和变化规律,再现了许多观测到的重要特征,为进一步分析模拟结果奠定了基础.  相似文献   

Dense gas in normal and active galaxies     

Kotaro Kohno  Koichiro Nakanishi  Tomoka Tosaki  Kazuyuki Muraoka  Rie Miura  Hajime Ezawa  Ryohei Kawabe 《Astrophysics and Space Science》2008,313(1-3):279-285

Dense molecular medium plays essential roles in galaxies. As demonstrated by the tight and linear correlation between HCN(1–0) and FIR luminosities among star-forming galaxies, from very nearby to high-z ones, the observation of a dense molecular component is indispensable to understand the star formation laws in galaxies. In order to obtain a general picture of the global distributions of dense molecular medium in normal star-forming galaxies, we have conducted an extragalactic CO(3–2) imaging survey of nearby spiral galaxies using the Atacama Submillimeter Telescope Experiment (ASTE). From the survey (ADIoS; ASTE Dense gas Imaging of Star-forming galaxies), CO(3–2) images of M 83 and NGC 986 are presented. Emphasis is placed on the correlation between the CO(3–2)/CO(1–0) ratio and the star formation efficiency in galaxies. In the central regions of some active galaxies, on the other hand, we often find enhanced or overluminous HCN(1–0) emission. The HCN(1–0)/CO(1–0) and HCN(1–0)/HCO⁺(1–0) intensities are often enhanced up to ∼0.2–0.3 and ∼2–3, respectively. Such elevated ratios have never been observed in the nuclear starburst regions. One possible explanation for these high HCN(1–0)/CO(1–0) and HCN(1–0)/HCO⁺(1–0) ratios is X-ray induced chemistry in X-ray dominated regions (XDRs), i.e., the overabundance of the HCN molecule in the X-ray irradiated dense molecular tori. If this view is true, the known tight correlation between HCN(1–0) and the star-formation rate breaks in the vicinity of active nuclei. Although the interpretation of these ratios is still an open question, these ratios have a great potential for a new diagnostic tool for the energy sources of dusty galaxies in the ALMA era because these molecular lines are free from dust extinction.  相似文献   

Synthesis of coda wave envelopes in randomly inhomogeneous elastic media in a half-space: single scattering model including Rayleigh waves     

Takuto Maeda  Haruo Sato  Takeshi Nishimura 《Geophysical Journal International》2008,172(1):130-154

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Bed morphology and grain size characteristics around a spur dyke     

Hao ZHANG  Hajime NAKAGAWA  Hideaki MIZUTANI 《国际泥沙研究》2012,27(2):141-155,157,156

This paper presents an experimental study on the local bed morphology and grain size characteristics around an impermeable spur dyke.A series of experiments are conducted with different types of sedime...  相似文献   

Detailed measurements of thickness and grain size of a widespread onshore tsunami deposit in Phang‐nga Province,southwestern Thailand     

Shigehiro Fujino  Hajime Naruse  Dan Matsumoto  Norihiko Sakakura  Apichart Suphawajruksakul  Thanawat Jarupongsakul 《Island Arc》2010,19(3):389-398

Measurements of thickness and grain size along flow‐parallel transects across onshore deposits of the 2004 Indian Ocean tsunami revealed macroscopic horizontal variations and provided new insights into tsunami sedimentation. The tsunami caused severe erosion of beaches, river mouths, and the shallow seafloor along the coast of southwestern Thailand and supplied sufficient sediment to deposit a kilometer‐wide blanket of sand on the land surface. The tsunami deposits generally fine landward with some fluctuations caused by local entrainment and settlement of sediments. Sediments of medium and fine sand are restricted to a few hundreds of meters inland from their source, whereas finer grained sediments were suspended longer and deposited 1 km or more inland. Although the thickness of the tsunami deposits is strongly influenced by local topography, they generally thin landward. In areas of low‐relief topography, the rate of landward thinning is exponential and reflects the dominance of sediment supply to nearshore areas over that to areas farther inland.  相似文献   

Hedonic approaches based on spatial econometrics and spatial statistics: application to evaluation of project benefits   总被引：1，自引：0，他引：1  

Morito Tsutsumi  Hajime Seya 《Journal of Geographical Systems》2009,11(4):357-380

This study discusses the theoretical foundation of the application of spatial hedonic approaches—the hedonic approach employing spatial econometrics or/and spatial statistics—to benefits evaluation. The study highlights the limitations of the spatial econometrics approach since it uses a spatial weight matrix that is not employed by the spatial statistics approach. Further, the study presents empirical analyses by applying the Spatial Autoregressive Error Model (SAEM), which is based on the spatial econometrics approach, and the Spatial Process Model (SPM), which is based on the spatial statistics approach. SPMs are conducted based on both isotropy and anisotropy and applied to different mesh sizes. The empirical analysis reveals that the estimated benefits are quite different, especially between isotropic and anisotropic SPM and between isotropic SPM and SAEM; the estimated benefits are similar for SAEM and anisotropic SPM. The study demonstrates that the mesh size does not affect the estimated amount of benefits. Finally, the study provides a confidence interval for the estimated benefits and raises an issue with regard to benefit evaluation.  相似文献