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XUE Jinzhuang 《《地质学报》英文版》2011,85(3):569-580
To investigate the phylogeny of early lycopsids, cladistic analyses using both parsimony and Bayesian approaches are presented, with a data matrix of 33 morphological characters across 25 taxa. The resulting parsimony and Bayesian trees showed overall similarities in tree topologies. In the Bayesian tree, the Protolepidodendrales and the heterosporous lycopsids are recognized as two monophyletic groups, and within the latter group, the Isoetales sensu lato forms a subclade. This topology implies that the acquisition of a ligulate character evolved twice in the lycopsids, once in the protolepidodendralean Leclercqia Banks et al., and once in the heterosporous lycopsid clade. Phylogenetic positions of several lycopsid plants previously reported from the Mid-Upper Devonian of South China, which have uncertain ordinal affinities, were estimated by the cladistic analyses; cf. Longostachys Xue et Hao, Longostachys Zhu et al., Monilistrobus Wang et Berry, and Yuguangia Hao et al. fall well within the Isoetales clade, as earliest members of this order, while Minostrobus Wang and Wuxia Berry et al. are nested within the basal part of the heterosporous lycopsids. Bayesian analyses are a very useful approach in systematic studies and can be applied in analyzing paleobotanical data sets as well. 相似文献
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以广东省珠海市外伶仃岛地区常见的4属5种石珊瑚为研究对象,对线粒体COI、16S rRNA和ITS三种基因片段数据进行分析,并计算了种间遗传距离。序列分析结果表明5种石珊瑚的COI、16S rRNA基因片段碱基AT含量大于GC含量,而ITS序列碱基AT含量小于GC含量;5种石珊瑚种间的三种基因平均遗传距离分别为0.043、0.134和0.763,所得遗传距离结果存在一定差异。将三种基因串联起来并利用邻位连接法(NJ)、最大似然法(ML)和最小进化法(ME)分别构建了分子系统树。在系统发育树中,科一级的系统进化关系与形态学分类一致,但蜂巢珊瑚科内的分子系统分类结果与形态学分类阐述的遗传进化关系略有差别,说明石珊瑚传统分类可能受骨骼可塑性的影响。研究结果为外伶仃岛石珊瑚的亲缘关系研究提供相关基础数据,并为该地区石珊瑚资源保护奠定理论基础。 相似文献
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遗传标记技术在海洋桡足类生物多样性和系统发生研究中的应用 总被引：3，自引：0，他引：3
研究回顾遗传标记技术的发展及其在海洋桡足类分类学、群体遗传学、系统发育和分子进化研究等方面的应用情况。 相似文献
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AJE Healey NJ McKeown WM Potts CL de Beer W Sauer PW Shaw 《African Journal of Marine Science》2017,39(3):307-313
Accurate species identification and biogeographic characterisation are fundamental for appropriate management of expanding cephalopod fisheries. This study addresses this topic within the common cuttlefish Sepia officinalis species complex (S. officinalis, S. hierredda and S. vermiculata), with an emphasis on occurrence in African waters. Tissue samples from the currently presumed distributions of S. vermiculata and S. hierredda (from South Africa and Ghana/Angola, respectively) were sequenced for the cytochrome c oxidase subunit I (COI) and the cytochrome b (cytb) genes of the mitochondrial genome and then compared to existing S. officinalis sequences. Three highly divergent and reciprocally monophyletic clades, corresponding to S. officinalis, S. hierredda and S. vermiculata, were resolved, representing the first molecular confirmation of the distinct species status of S. hierredda and S. vermiculata. The sequences also revealed that, contrary to expectations based on presently published information, all samples from southern Angola were S. vermiculata. These results indicate that the range of S. vermiculata extends beyond the currently described northern limit and that S. hierredda and S. vermiculata may be indiscriminately harvested in Angolan waters. Finer-scale patterns within S. vermiculata phylogeography also indicate that the Benguela Current System and/or other environmental factors serve to isolate northern and southern stocks. 相似文献
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12种石鲈科鱼类线粒体16S rRNA基因的部分序列分析 总被引：4，自引：0，他引：4
分析了5属12种石鲈科鱼类的线粒体16S rRNA基因部分序列特征,并参照RNA二级结构模型区分配对区和非配对区。结果表明,配对区对G有偏好(33.5%),非配对区对A有偏好(38.5%);与配对区相比,非配对区存在更多的变异和系统发育信息。从序列的Jukes-Cantor遗传距离结果看,石鲈科胡椒鲷属Plectorhynchus、矶鲈属Parapristipoma、石鲈属Hapalogenys、髭鲷属Pomadasys、Haemulon属5个属属间的差异水平都接近或超过了其与外类群科间的差异水平。从构建的ME系统发育树结果看,石鲈科鱼类分成二大分支,未能形成单一类群。在亲缘关系上,胡椒鲷属和矶鲈属较近,石鲈属和Haemulon属较近,髭鲷属与其它4个属较远,髭鲷属在鲈亚目中的分类地位可能应提高到科的水平。初步确定研究中选用的16S rRNA基因片段基本适用于石鲈科属间和属内种间关系的研究。 相似文献
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Platycephalus in Chinese sea area has a high commercial value.However,there were mis-identifications in previous records.In this study,we fully distinguished and diagnosed all five species,Platycephalus indicus,P.cultellatus,Platycephalus sp.,Platycephalus sp.1 and Platycephalus sp.2.The results revealed that P.cultellatus was overlooked by previous ichthyologists.Platycephalus sp.1 was misidentified as P.indicus in reality,and Platycephalus sp.2 only existed in the seas of Japan.Furthermore,morphological,especially phylogenetic analysis indicated that Platycephalus sp.from South China Sea differs from all former known species,which might be a new species.We identified all Platycephalus species in China seas for the first time,which will contribute to local species identification,biodiversity conservation and sustainable exploitation of Platycephalus species. 相似文献
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The inferential basis of species hypotheses: the solution to defining the term 'species' 总被引：2，自引：0，他引：2
Kirk Fitzhugh 《Marine Ecology》2005,26(3-4):155-165
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