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Relationship of intertidal surface sediment chlorophyll concentration to hyperspectral reflectance and chlorophyll fluorescence
Authors:Jacco C Kromkamp  Edward P Morris  Rodney M Forster  Claire Honeywill  Scott Hagerthey  David M Paterson
Institution:1. Centre for Estuarine and Coastal Ecology (NIOO-CEMO), Netherlands Institute of Ecology, P. O. Box 140, 4400 AC, Yerseke, The Netherlands
3. Sediment Ecology Research Group, Gatty Marine Laboratory, University of St. Andrews, KY16 8LB, St. Andrews, Fife, Scotland
Abstract:Estimating biomass of microphytobenthos (MPB) on intertidal mud flats is extremely difficult due to their patchy occurrence, especially at the scale of an entire mud flat. We tested two optical approaches that can be applied in situ: spectral reflectance and chlorophyll fluorescence. These two approaches were applied in 4 European estuaries with different sediment characteristics. At each site, paired replicate measurements of hyperspectral reflectance, chlorophyll fluorescence (after 15 min dark adaptation, Fo 15), sediment water content, and chlorophylla concentrations were taken (including breakdown products: chla+phaeo]). Sediments were further characterized by grain size and organic content analysis. The spectral signatures of tidal flats dominated by benthic microalgae, mainly diatoms, could be easily distinguished from sites dominated by macrophytes; we present a 3 waveband algorithm that can be used to detect the presence of macrophytes. The normalized difference vegetation index (NDVI) was found to be most strongly correlated to sediment chla+phaeo], except for the predominantly sandy Sylt stations. Fo 15 was also significantly correlated to sediment chla+phaeo] in all but one grid (Sylt grid A). Our results suggest that the functional relationships (i.e., the slopes) between NDVI or fluorescence and chla+ phaeo] were not significantly different in the muddier grids, although the intercepts could differ significantly, especially for Fo 15. This suggests a mismatch of the optical depth seen by the reflectometer or fluorometer and the depth sampled for pigment analysis. NDVI appears to be a robust proxy for sediment chla+phaeo] and can be used to quantify MPB biomass in muddy sediments of mid latitude estuaries.
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