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1.
What can we learn from genomics approaches in marine ecology? From sequences to eco‐systems biology!
The application of genomic approaches to marine biota has profoundly altered our understanding of life in the oceans, especially regarding concepts of adaptation, speciation and evolution. The avalanche of genomic data has provided an unbiased view of marine biology that has never been seen before. In particular, comparative and metagenomic approaches with microbes from different biogeochemical marine provinces provided the first insights into how they acquire and discard genes as needed, even across kingdom boundaries, in response to their environment. These data clearly reveal that marine microbes have remarkable abilities to change their genomes according to both environmental stresses and biotic interactions. Thus, it is most likely that the flux of energy and matter in the marine system is reflected by the presence or absence of genes and proteins in marine organisms, which could provide novel tools to understand biogeochemical processes of global significance. However, the challenge is to put the reductionistic knowledge gained by genomics and metagenomics into the larger contexts of cellular systems and ecosystems to identify emergent properties that could not have been predicted by breaking down the whole into its individual parts. 相似文献
2.
ME Alexander CA Simon CL Griffiths K Peters S Sibanda S Miza 《African Journal of Marine Science》2016,38(1):141-144
Biological invasions continue to increase around the world, with impacts on many coastal marine systems. Here we review the South African marine invasion literature which, despite the field being relatively new, has grown to have significant presence in both the local and international arenas. Of the 79 papers reviewed, 70% focused on the establishment and spread of alien species, with modes of transport and introduction largely overlooked. An emphasis was also apparent towards field studies, in particular survey work, with few experimental studies. The overwhelming majority of papers focused on a single species, the Mediterranean mussel Mytilus galloprovincialis, reflecting the scale of this invasion and the tractable nature of rocky shores as study systems. With the exception of this one species, the impacts of marine alien species have rarely been quantified. We suggest that future research extends the taxonomic coverage of present work and develops a better understanding of the mechanisms of introduction, establishment and spread of marine alien species. Through an experimental approach, the drivers of altered ecological patterns and processes resulting from invasions should be addressed, providing insight into associated impacts. This approach will maintain the local applicability and international relevance of South African marine invasion research. 相似文献
3.
The intertidal copepod, Tigriopus japonicus, has been recognized as a promising model species for marine environmental genomics. To obtain extensive genomic DNA sequences from this species, we sequenced genomic DNA from adult copepods using genomic sequencers GS-FLX and GS-FLX-Titanium and attained 1,914,995 reads (average read length 299.8 bp) including 574.2 Mb of genomic DNA information. After subjecting them to assembly, we acquired 193,642 contigs (total contigs length 129.7 Mb), and finally were able to obtain 10,894 unigenes (E-value > 0.1; length > 200 bp) containing 33,081,455 bp after a nonredundant (NR) blast search. In this paper, we summarize the genomic DNA sequences of T. japonicus and discuss its potential use in environmental genomics and ecotoxicological studies for uncovering mechanisms of environmental stresses and chemical toxicities to marine crustaceans. 相似文献
4.
《Marine Policy》2017
As domestic affluence increases, nations advocate for conservation policies to protect domestic biodiversity that often curtail natural resource production activities such as fishing. If concomitant consumption patterns remain unchanged, environmentally conscious nations with high consumption rates such as the U.S. may only be distancing themselves from the negative environmental impacts associated with consuming resources and commodities produced elsewhere. This unintended displacement of ecosystem impacts, or leakage, associated with conservation policies has not been studied extensively in marine fisheries. This paper examines this topic, drawing on case studies to illustrate the ways in which unilateral marine conservation actions can shift ecosystem impacts elsewhere, as has been documented in land use interventions. The authors argue that the U.S. should recognize these distant ecological consequences and move toward greater self-sufficiency to protect its seafood security and minimize leakage as well as undertake efforts to reduce ecosystem impacts of foreign fisheries on which it relies. Six solutions are suggested for broadening the marine conservation and seafood consumption discussion to address leakage induced by U.S. policy. 相似文献
5.
6.
《Marine Policy》2013
Information on past trends is essential to inform future predictions and underpin attribution needed to drive policy responses. It has long been recognised that sustained observations are essential for disentangling climate-driven change from other regional and local-scale anthropogenic impacts and environmental fluctuations or cycles in natural systems. This paper highlights how data rescue and re-use have contributed to the debate on climate change responses of marine biodiversity and ecosystems. It also illustrates via two case studies the re-use of old data to address new policy concerns. The case studies focus on (1) plankton, fish and benthos from the Western English Channel and (2) broad-scale and long-term studies of intertidal species around the British Isles. Case study 1 using the Marine Biological Association of the UK's English Channel data has shown the influence of climatic fluctuations on phenology (migration and breeding patterns) and has also helped to disentangle responses to fishing pressure from those driven by climate, and provided insights into ecosystem-level change in the English Channel. Case study 2 has shown recent range extensions, increases of abundance and changes in phenology (breeding patterns) of southern, warm-water intertidal species in relation to recent rapid climate change and fluctuations in northern and southern barnacle species, enabling modelling and prediction of future states. The case is made for continuing targeted sustained observations and their importance for marine management and policy development. 相似文献
7.
Hidetaka Takeoka 《Journal of Oceanography》2002,58(1):93-107
The Seto Inland Sea is a representative coastal sea in Japan with a complicated geometry and thus a variety of marine environments.
This sea is, at the same time, one of the most industrialized areas in Japan, and its marine environment has been significantly
affected by the anthropogenic impacts over the last four decades. The wide range of marine environments in this sea and the
serious environmental issues resulting from these impacts have attracted the attention of Japanese coastal oceanographers.
It is believed that the nature and scope of these studies might be an example of the progress of Japanese coastal oceanography.
The historical changes in the Seto Inland Sea environment in the last four decades are briefly summarized, and the progress
in the studies of the Seto Inland Sea is reviewed with reference to historical changes. Some recent research topics and activities
are also mentioned.
This revised version was published online in August 2006 with corrections to the Cover Date. 相似文献
8.
Constructing a raster-based spatio-temporal hierarchical data model for marine fisheries application
1 Introduction The GIS has shown great success for terrestrial ap- plicationsin the last decades, but its use in marine fields has been far more restricted. One of the main reasons is that most of the GIS systems or their data models are designed for land… 相似文献
9.
Industrial longline fishing can be understood as a case study of the cultural, economic, environmental and social impacts of unsustainable fishing technology. While much attention has been attributed to the impact of industrial longlines on the marine ecosystem, little is known about the impact of longline fishing on local food security, employment, cultural belief systems and traditions, revenue generation from marine tourism and climate change. New data demonstrate that the contributions of Marine Protected Areas, marine tourism and recreational fishing to local coastal economies dwarf the contributions of longline fishing. When combined with the impact of overfishing on coastal fishing communities and fish consumers, policies promoting sustainable fisheries must be expanded to take these other factors into account along with issues of biodiversity. 相似文献
10.
High sea industrial longline fishing can be understood as a case study of the cultural, economic, environmental and social impacts of unsustainable fishing technology. While much attention has been attributed to the impact of industrial longlines on the marine ecosystem, little is known about the impact of longline fishing on local food security, employment, cultural belief systems and traditions, revenue generation from marine tourism and climate change. New data demonstrate that the contributions of Marine Protected Areas, marine tourism and recreational fishing to local coastal economies dwarf the contributions of longline fishing. When combined with the impact of overfishing on coastal fishing communities and fish consumers, policies promoting sustainable fisheries must be expanded to take these other factors into account along with issues of biodiversity. 相似文献
11.
《Marine Policy》2005,29(1):57-68
Although many jurisdictions have embraced ecosystem-based management for the marine environment, it is unclear what this entails in terms of both theory and practical action. I examine the management of complex systems in industrial control as a source of practical guidance on how to approach the ideals of marine ecosystem management. Industrial control systems focus on objectives and outcomes, are hierarchical and localise and distribute control tasks. The principles of hierarchical control systems and focussing on ecosystem services helps overcome the conceptual difficulties with ecosystem management while retaining the idea of a holistic approach to managing human impacts. 相似文献
12.
《Ocean & Coastal Management》2003,46(8):763-796
Bangladesh has vast coastal and marine resources along its south edge. Due to the geographical position and climatic condition, the coastal area of the country is known as one of the highly productive areas of the world. Bangladesh is rich not only in terms of its vast water areas but also in terms of the biological diversity. One of the unique features of the coastal areas is the influence of the mangrove forests, which support a high number of fishes and other commercially important aquatic organisms. The biological and ecological values of the Bay of Bengal have been pointed out by many authors. The coastal and marine fisheries have been playing considerable roles not only in the social and economic development of the country but also in the regional ecological balance. A large number of commercially important fishes have long been exploited which are of high export values. Shrimp aquaculture has become a highly traded export-oriented industry for the last few decades. In spite of having bright prospects, marine aquaculture on a commercial basis as well as marine stock enhancement and sea ranching are yet to be developed. The marine fisheries sector has been suffering from chronic disintegration and mismanagement that have led to many consequences. Most of the commercially important fish stocks are either overexploited or under threat. Marine pollution has reached a level that could create an unmanageable situation in the near future; coastal shrimp farming has generated considerable debates due to its adverse environmental and socioeconomic impacts. The Bay of Bengal and its coastal areas are one of the most poorly studied areas of the world although it possesses high potential for further stock improvement. Proper attention is needed in every aspect of exploitation, handling and processing, export and marketing as well as in biological and institutional management strategies. The Bay of Bengal has been increasingly important for local development as well as for a global perspective. The coastal and marine fisheries of the Bay of Bengal are briefly reviewed in this paper to provide a salient feature of the available information and resource base and to identify future research and management needs. 相似文献
13.
海洋青鳉鱼专用型基因芯片的设计及其在生态毒理学上的应用研究 总被引：3，自引：0，他引：3
以生物芯片技术为核心,结合生态毒理学与功能基因组学的方法,制备了海洋青鳉鱼专用型生物芯片,包含180个与细胞分裂、解毒反应、缺氧反应、氧化应激反应、凋亡、生长和发育、性别决定和性腺分化以及生殖激素分泌等功能相关的基因.我们提取了雌性海洋青鳉鱼成体在正常培养和缺氧处理12周后的肝脏和卵巢组织总RNA,利用自制的基因芯片进行了基因表达谱分析,结果显示海洋青鳉鱼在缺氧压力环境下,肝脏和卵巢组织的差异性表达基因分别检测出9个和6个,表明应用此类自制良好的芯片可有效获得海洋青鳉鱼的组织特异性基因表达图谱,也将加强对海洋缺氧状态、氧化应激等反应的分子生物学机制的理解.本研究对于识别异常环境状态下的基因表达模式和组织特异性标志物,进一步开展监测海洋生态毒理因素的研究奠定良好的基础. 相似文献
14.
The Pacific Decadal Oscillation 总被引：60，自引：1，他引：60
The Pacific Decadal Oscillation (PDO) has been described by some as a long-lived El Niño-like pattern of Pacific climate variability, and by others as a blend of two sometimes independent modes having distinct spatial and temporal characteristics of North Pacific sea surface temperature (SST) variability. A growing body of evidence highlights a strong tendency for PDO impacts in the Southern Hemisphere, with important surface climate anomalies over the mid-latitude South Pacific Ocean, Australia and South America. Several independent studies find evidence for just two full PDO cycles in the past century: “cool” PDO regimes prevailed from 1890–1924 and again from 1947–1976, while “warm” PDO regimes dominated from 1925–1946 and from 1977 through (at least) the mid-1990's. Interdecadal changes in Pacific climate have widespread impacts on natural systems, including water resources in the Americas and many marine fisheries in the North Pacific. Tree-ring and Pacific coral based climate reconstructions suggest that PDO variations—at a range of varying time scales—can be traced back to at least 1600, although there are important differences between different proxy reconstructions. While 20th Century PDO fluctuations were most energetic in two general periodicities—one from 15-to-25 years, and the other from 50-to-70 years—the mechanisms causing PDO variability remain unclear. To date, there is little in the way of observational evidence to support a mid-latitude coupled air-sea interaction for PDO, though there are several well-understood mechanisms that promote multi-year persistence in North Pacific upper ocean temperature anomalies. 相似文献
15.
《Marine Policy》2014
There is increasing concern over the consequences of environmental change for people and communities that depend on already fragile marine resources, given the mounting evidence of sustained over-exploitation and climate change impacts on marine systems. In order to explore the potential social resilience of marine-dependent livelihoods to environmental change, interviews with fishers and marine-based tourism operators in the Caribbean island of Anguilla were undertaken, to identify the impacts of hurricane events on marine livelihoods, the perceptions of resource-users and their potential adaptability to future change. For both sectors of resource-users, there is evidence that they have diversified livelihoods to achieve financial security, which may provide resilience to future climate related impacts or resource variability. In addition, specific behavioural changes that have been developed following previous hurricane events, e.g. removal of fish pots during hurricane months, or bringing boats to shore, indicate fishers' flexibility to changing conditions. However, strong personal and cultural attachment to occupations, particularly among fishers, may hinder resilience. Additionally, the reliance of all of these marine resource-users on the climate-dependent tourism industry may undermine their capacity to cope with future environmental change. Many of these problems are common throughout the Caribbean, as thousands of marine-dependent livelihoods are vulnerable to marine degradation and climate change impacts. Urgent attention is therefore required to support the development of adaptive, sustainable management of marine resources that may enhance resilience to environmental change. 相似文献
16.
《Marine Policy》2016
The emerging ocean energy industry, which seeks to utilise waves and tides to generate electricity, is developing in many jurisdictions. The UK, and Scotland in particular, is strongly interested in these technologies, and has made considerable efforts to reform its marine governance processes to better meet the needs of innovative new marine industries. This paper provides an industry perspective on this regulatory framework, reporting on the experiences of ocean energy project and technology developers. Semi-structured interviews with companies with practical experience with Scotland's regulatory framework provide evidence of a number of legal and regulatory challenges, as well as interesting insights into how developers are interacting with new marine governance systems. The paper details the findings of these interviews and offers some suggested directions for future research. 相似文献
17.
《Marine Policy》2015
The world׳s oceans are currently undergoing an unprecedented period of industrialisation, made possible by advances in technology and driven by our growing need for food, energy and resources. This is placing the oceans are under intense pressure, and the ability of existing marine governance frameworks to sustainably manage the marine environment is increasingly being called into question. Emerging industries are challenging all aspects of these frameworks, raising questions regarding ownership and rights of the sea and its resources, management of environmental impacts, and management of ocean space. This paper uses the emerging marine renewable energy (MRE) industry, particularly in the United Kingdom (UK), as a case study to introduce and explore some of the key challenges. The paper concludes that the challenges are likely to be extensive and argues for development of a comprehensive legal research agenda to advance both MRE technologies and marine governance frameworks. 相似文献
18.
蜑螺科软体动物系统分类学研究进展 总被引：2，自引：0，他引：2
蜑螺科是一类广盐性腹足类动物,主要分布在热带和亚热带海域,是潮间带底栖生物群落的重要组成部分之一,该科动物为探讨物种适应辐射及热带海域生物多样性模式提供了重要研究材料。本文对蜑螺科的国内外系统分类学研究现状和趋势进行了回顾与展望。蜑螺类动物为适应不同生境而进化出多样的贝壳形态,仅依据外部形态很容易产生误导或错误鉴定,因此蜑螺科的分类系统以及一些种属的有效性仍存在争议。我国缺乏系统的蜑螺科分类学研究,已报道的种类还不能完全反应中国海实际的物种数。未来需强化标本采集,在传统形态学分类的基础上,借助分子生物学和解剖学等手段,明确中国海蜑螺科种属组成和区系特点,进而完善蜑螺科的系统分类学研究。 相似文献
19.
《African Journal of Marine Science》2013,35(4):409-422
The number of scientific papers resulting from biologging instruments deployed on marine mammals is increasing as improved technologies result in smaller devices and improved sensor-, storage- and transmission capabilities. I undertook a comprehensive review of papers resulting from biologging deployments on free-ranging marine mammals between 1965 and 2013 (n = 620) to summarise where (e.g. on which species, as well as in which geographic areas) deployment efforts were focused, the impacts of the resulting papers, and where there are shortcomings in the literature. Species-, sex- and age-class biases were evident in terms of animals instrumented. Also, large proportions of the papers resulted from deployments on a small number of species (particularly among the pinnipeds) and were more often on adult females than other demographic classes. The mean impact of papers (as assessed using journal impact factors and numbers of citations) was consistent over time, and was influenced by the number of species studied, sample sizes and instrument capabilities. I found a paucity of papers addressing device influences on animals, as well as studies with explicit conservation and/or management implications. This review aims to increase awareness of marine mammal biologging data already collected, stimulate appropriate further studies, and encourage the reuse of existing data. 相似文献
20.
70年来中国化学海洋学研究的主要进展 总被引：5，自引：3，他引：2
我国的海洋化学工作者通过70年来,特别是近30年来的化学海洋学研究,实现了我国与世界先进水平进入同步发展的快车道,其显著的特点是:(1)化学海洋学研究从元素地球化学分布系统转向了以揭示深层次海洋生物地球化学过程为核心的研究;(2)化学海洋学研究实现了多领域、多视点的综合交叉研究;(3)更加关注了人为影响与自然变化共同作用下的海洋生态环境变化研究,对近海和海岸带而言,更加注重从海陆统筹一体化角度探析化学物质的分布迁移特征。本文从生源要素的海洋生物地球化学过程、微/痕量元素与同位素的海洋化学研究、生物过程作用下的化学海洋学过程等角度,重点总结归纳和分析了30年来我国海洋化学研究的重要进展和发展状况,以期对化学海洋学的进一步研究提供借鉴和启迪。 相似文献