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1.
基于16S rRNA序列初步探讨贻贝属的系统发育   总被引：2，自引：0，他引：2       下载免费PDF全文
通过比较贻贝属5个物种包括中国的两种贻贝的线粒体16S rRNA基因部分序列,来初步确定它们的系统发育关系和了解中国沿海两种贻贝的遗传多样性情况.以Perna viridis为外群,采用NJ法和MP法构建分子系统树.系统发育分析表明,5种贻贝(Mytilus californianus, M. corcuscus, M. galloprovincialis, M. edulis, M. trossulus)在系统树上依次进行分叉,呈放射状.M. californianus最为原始,M. corcuscus次之.每一个贻贝物种都形成单系.其中,M. edulis和M. trossulus是非常相似的,M. corcuscus和M. californianus的亲缘关系近.同时发现,我国沿海分布的紫贻贝(M. galloprovincialis)和厚壳贻贝(M. corcuscus)的遗传多样性都较高,但厚壳贻贝的遗传多样性要低于紫贻贝,可能是由于厚壳贻贝过度被渔民开采等导致厚壳贻贝群体大小降低的缘故.这里系统发育分析为将来进行物种进化、迁移和育种方面的比较研究提供理论基础.  相似文献   

2.
Dinoflagellate cysts were studied in 42 samples from the surface sediments of the White Sea. The total concentration of dinocysts varies from single cysts to 25 000 cyst/g of dry sediments, which reflects the biological productivity in the White Sea waters and the regional particular features of the sedimentation processes. The highest concentrations are observed in silts; they are related to the regions of propagation of the highly productive Barents Sea waters in the White Sea. Generally, the spatial distribution of dinocysts species in the surface sediments corresponds to the distribution of the major types of water masses in the White Sea. The cysts of the relatively warm-water species (Operculodinium centrocarpum, Spiniferites sp.) of North Atlantic origin that dominate in the sediments indicate an intensive intrusion of the Barents Sea water masses to the White Sea along with hydrological dwelling conditions in the White Sea favorable for the development of these species during their vegetation period. The cold-water dinocyst assemblage (Islandinium minutum, Polykrikos sp.) is rather strictly confined to the inner parts of shallow-water bays, firstly, those adjacent to the Onega and Severnaya Dvina river mouths.  相似文献   

3.
It is stated that the seasonal variation of tidal constants may be generated through a mechanism related to the influence of one subsystem on another. This statement is verified on the basis of the three-dimensional nonlinear finite-element thermohydrodynamic model QUODDY-4, which is used to investigate the tidal dynamics of the wave M 2 in the system of the White and Barents seas. It is testified that the freezing of the White Sea and the resulting fixed ice cover change the tidal characteristics in the other subsystem—the nonfreezing Barents Sea. Here (especially, in the southern part of the Barents Sea, adjacent to the boundary of the White Sea), the relative variations in the amplitude of tidal sea surface level elevations and the maximum barotropic tidal velocity may constitute up to 75%, and the variation in phases of tidal sea surface level elevations may cover a few tens of degrees. It follows that the seasonal variability of tidal constants induced by the influence of one subsystem on another may in principal occur and there are no good grounds for its disregard, as has been done usually.  相似文献   

4.
A biochemical genetic study of the mussels Perna perna and Choromytilus meridionalis on the west coast of South Africa revealed the presence of an unreported mytilid mussel that had previously been mistaken, because of its shell colour polymorphism, for either P. perna or a hybrid between P. perna and C. meridionalis. The gene products of 19 protein-coding loci in P. perna. C. meridionalis and in the newly recognized mussel were examined by means of horizontal starch-gel electrophoresis. The results showed that there was no allele-frequency overlap between any of these mussel taxa, thus implying little or no genetic relatedness between them. A morphological examination showed that the previously unreported mytilid has a pitted resilial ridge (similar to that of Perna), an anterior adductor muscle (unlike either Perna or Choromytilus), and an undivided posterior foot retractor-muscle scar (unlike Perna). Such features are diagnostic of the genus Mytilus. The South African Mytilus has morphological traits that are more characteristic of M. galloprovincialis of the Mediterranean Sea than of the more cosmopolitan M. edulis. which occurs in the northern and southern Pacific and Atlantic oceans. A large heterozygosity in Mytilus sp. argues against a recent dispersal from the Mediterranean Sea via a small founder population. Rather, the presence of Mytilus sp. in South Africa may represent a relict population of a wider geographic distribution of M. galloprovincialis resulting from Pleistocene cooling. However, the warmer water at lower latitudes could have still prevented dispersal of M. edulis, a species adapted to colder waters.  相似文献   

5.
An investigation into the interaction of surface M 2 tides in the system of marginal seas of the North European Basin is carried out using the three-dimensional finite-element hydrostatic model QUODDY-4. Three numerical experiments are performed for this purpose. In the first (control), the model equations are solved in the system of the Norwegian, Greenland, Barents, and White seas; thereby the interaction of the tides in these seas is explicitly taken into account. In the second experiment, the White Sea is excluded from consideration and the no-flux condition is posed at the entrance to the sea. The third experiment uses an approach in which the observed tidal elevations that determine the existence of a finite horizontal transport of barotropic energy to the White Sea are specified at the open boundary of the White Sea. It is shown that changes in tidal dynamics represented by changes in the amplitudes and phases of tidal elevations and in the barotropic tidal velocity ellipse parameters are within the model noise in experiments 2 and 3 when compared with the control experiment. On the contrary, changes in energy characteristics (the horizontal wave transport, density, and dissipation rate of barotropic tidal energy) are equal to or greater (in order of magnitude) than the energy characteristics themselves.  相似文献   

6.
《Progress in Oceanography》2007,72(2-3):214-232
Centropages typicus is one of the most common, abundant and best studied calanoid copepods in neritic waters of the Mediterranean Sea, which means it can provide useful information about the long-term dynamics of the Mediterranean epipelagic ecosystem. This paper presents the first comparative overview of the seasonal and long-term variability of C. typicus in different Mediterranean regions. This review is based on quantitative information from the published literature and novel data from five ongoing zooplankton time-series carried out in the Mallorca Island (Balearic Sea), the Bay of Villefranche (Ligurian Sea), the Gulf of Naples (Tyrrhenian Sea), the Gulf of Trieste (North Adriatic Sea), and the Saronikos Gulf (Aegean Sea). In most Mediterranean regions, C. typicus has a perennial occurrence, with peaks of abundance that reflect the succession of different generations. Throughout the Mediterranean, the annual cycle of C. typicus is characterized by minima in winter and major peaks in April–June, which is earlier than those observed in European Atlantic waters, where the peaks are more frequently recorded in summer and fall. In the regions investigated, the annual cycle shows remarkable similarities in terms of timing, but notable differences in the peak height; populations are far more abundant in coastal north-western regions and less abundant in the eastern basin. In the long-term, changes in C. typicus phenology observed in the Bay of Villefranche and in the Gulf of Naples are related to the North Atlantic Oscillation (NAO) index. In these two regions, the species responds to climate forcing similarly in terms of average seasonal patterns (bi-modal patterns in years of positive NAO, unimodal patterns in years of negative NAO) but oppositely in terms of quantity, indicating different influence of the NAO on the two regions. At decadal scales, C. typicus populations show high interannual variability with marked geographical differences. In some areas, the patterns are clearly characterized by alternate phases of higher and lower annual abundances, at higher frequency (mainly 1–2 years) in the Gulf of Naples, and lower frequency in the Saronikos Gulf (mainly 4–5 years) and in the Gulf of Trieste (mainly 5–6 years). Synchronous phases of increasing or decreasing abundance are discernable only for a few sites and short periods, for example from 1998 to 2000 in the Gulf of Naples, Gulf of Trieste and Saronikos Gulf. The regional differences observed in the long-term patterns of C. typicus populations suggest that the temporal dynamics of this species are significantly more affected by local conditions than by any possible common driving force acting at basin scale through teleconnections.  相似文献   

7.
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8.
We studied the genetic structure of the sea cucumber Holothuria (Roweothuria) polii (Delle Chiaje 1823) by analysing the mitochondrial DNA variation in two fragments of cytochrome oxidase I (COI) and 16S genes. Individuals were collected in seven locations along the Mediterranean Sea, which cover a wide range of the species distribution. We found high haplotype diversity for COI and moderate diversity for 16S, and low nucleotide diversity for both genes. Our results for the COI gene showed many recent and exclusive haplotypes with few mutational changes, suggesting recent or ongoing population expansion. The Western and Eastern Mediterranean populations exhibited slight but significant genetic differentiation (COI gene) with higher genetic diversity in the East. The most ancient haplotype was not present in the westernmost sampling location (SE Spain). The oldest expansion time was observed in Turkey, corresponding to mid‐Pleistocene. Turkey had also the highest genetic diversity (number of total and exclusive haplotypes, polymorphisms, haplotype and nucleotide diversity). This suggests that this region could be the origin of the subsequent colonizations through the Mediterranean Sea, a hypothesis that should be assessed with nuclear markers in future research.  相似文献   

9.
Using the three-dimensional nonlinear finite-element thermohydrodynamic model QUODDY-4, we obtain two solutions giving an idea of the role of the nonlinear interaction of tidal harmonics in the formation of their spatial structure. The first solution is induced by the total tide (M 2 + S 2 + K 1 + O 1) at the open boundary and by the total static tide inside the area under consideration; then, the solution obtained is subject to harmonic analysis. The second solution is obtained by specifying such tidal sea level elevations at the open boundary that meet individual tidal harmonics. These two solutions are compared. It is shown that the differences between the solutions for the S 2, K 1, and O 1 waves can be significant, especially near the open boundary between the White and Barents seas. This conclusion remains valid also for the maximum velocities (major semiaxes of the ellipses) of the barotropic (depth-average) tidal current as well as for the average (over the tidal cycle) densities of the total tidal energy and components of the tidal-energy budget. The emergence of this feature indicates that there are resonance modes with frequencies that differ from those of the S 2, K 1, and O 1 harmonics to a lesser extent than the M 2 harmonic frequency. The same conclusion can be made by comparing the values of the amplification factor, which is defined as the ratio between the actual and static tides, for the system of the Barents and White seas as a whole and for Mezen Bay in the White Sea and Czech Bay in the Barents Sea, taken separately.  相似文献   

10.
Abstract. Nine allozyme and two minisatellite loci were used to investigate potential genetic differentiation among three samples of Mediterranean poor cod, Trisopterus minutus capelanus, from the Gulf of Lion, the Tuscan Archipelago and the Aegean Sea. Both types of markers showed consistent results, with FST values of 0.0262 and 0.0296 (P < 0.0015, after Bonferroni correction for multiple tests) for allozymes and minisatellites, respectively. Allele frequency heterogeneity tests between pairs of samples showed a clear separation between the two western Mediterranean samples (Gulf of Lion, Tuscan Archipelago) and the eastern one (Aegean Sea). The results indicate that at least two reproductively isolated populations of poor cod occur in the Mediterranean.  相似文献   

11.
Atlantic–Mediterranean anchovies were genetically characterized at two polymorphic nuclear loci (intron 6 of two creatine-kinase genes) and compared to reference Engraulis albidus and E. encrasicolus samples from the northern Western Mediterranean to provide new insights into their geographic structure. Northeastern Atlantic anchovy, represented by one sample from the Canary archipelago and one sample from the Alboran Sea, were genetically distinct from Mediterranean E. encrasicolus (Weir and Cockerham's ^θ = 0.027–0.311), indicating geographic isolation from either side of the Almería–Oran oceanographic front. Generally smaller genetic differences were evident among anchovy populations from different sub-basins in the Mediterranean (^θ = − 0.019–0.116), the genetic differences between Black Sea and Ionian Sea/Aegean Sea anchovies being the strongest (^θ = 0.002–0.116). There was no evidence of the presence of E. albidus in our samples outside Camargue (northern shore of the Western Mediterranean). However, a sample from the southern Western Mediterranean appeared to be genetically intermediate between E. albidus and Mediterranean E. encrasicolus, indicating possible hybridization. Anchovy from the Benguela current system off southern Africa possessed allele frequencies characteristic of E. albidus at one locus and Northeastern Atlantic anchovy at the other locus, suggesting past introgression.  相似文献   

12.
Sediments and mussels (Mytilus edulis, Mytilus galloprovincialis) were sampled in different European coastal environments (Germany, France, Spain) and analysed for their polycyclic aromatic hydrocarbon (PAH) content by Gas Chromatography/Mass Spectrometry (GC-MS). Bioaccumulation factors of individual compounds from the sediment were calculated and discussed according to the compound solubility. The mussels showed different accumulation patterns according to the pollution source they were exposed to (dissolved fraction of PAHs, particulate fraction, petroleum present in the water column). The exposure source also depends on the geographical location of the mussels. In the Mediterranean Sea, the bivalves were mainly exposed to the dissolved fraction of PAHs, while in the Baltic Sea and in the Atlantic Ocean, the PAHs associated to the particles were significant sources.  相似文献   

13.
A new population of vestimentiferan tubeworms was discovered during a recent expedition to a mud volcano field in the Alboran Sea, western Mediterranean Sea. Morphological data and mitochondrial cytochrome-c-oxidase subunit 1 (COI) sequences show that the Alboran tubeworm is essentially identical to Lamellibrachia sp. found in the eastern Mediterranean. This is the first record of a vestimentiferan species in the western basin of the Mediterranean, an area with direct connection to the Atlantic via the Strait of Gibraltar and therefore of great importance to the study of distributional patterns and evolution of Mediterranean species. We examine the current hypotheses on the biogeographic distribution of vestimentiferan species in the eastern Atlantic and Mediterranean Sea and conclude that independently of when Lamellibrachia colonized the Mediterranean, neither the present hydrological settings of both Mediterranean Sea and Atlantic Ocean, nor vestimentiferans reproductive biology are impeditive to the presence of the Mediterranean species of Lamellibrachia in the NE Atlantic. The West African and Lusitanian margins are the most likely places to find living populations of this species in the NE Atlantic.  相似文献   

14.
Population genetic data of marine genetic resources add up to establish their pattern of connectivity. Such pattern determines the choice of a suitable management strategy to those resources in space and time. This study addresses the pattern of connectivity among European hake grounds upon the largest sampling effort so far developed in this species. Bayesian inference made on multilocus genotypic data provides evidence that a large genetic connectivity exists among Atlantic grounds and is mediated by significant migration rates stepping up from the Celtic Sea towards its adjacent Atlantic grounds. Therefore, the spawning biomass of the northern hake population could play a crucial role at ensuring the sustainability of southern hake fish grounds. The deepest restriction to gene flow was observed at the easternmost side of the Alboran Sea what suggests that the Almeria–Oran Oceanographic Front is an effective barrier keeping apart the two major gene pools so far shown in this species. A molecular clock calibrated for cytochrome b sequences of fishes and applied to the divergence between hake pools (0.3%) suggests that the Atlantic–Mediterranean population split might date back to the Middle Pleistocene (150,000 years BP). Complementarily, Bayesian treatments of multilocus genotypes indicate that such barrier to gene flow remains active nowadays. This study shows the upmost interest of future integrative efforts to incorporate population genetic data into current assessment practices, in order to better manage European hake populations and make its exploitation sustainable.  相似文献   

15.
A comparative analysis of the species composition and indices of associated organisms for the red king crab Paralithodes camtschaticus has been carried out at two aquatic areas of the Barents Sea that differ based on the intensity of their water exchange with the open sea areas. In Dolgaya Bay, a typical fjord of the Barents Sea with low water circulation, such common fouling organisms as the barnacles Balanus crenatus dominated on the crabs, while, in Dalnezelenetskaya Bay, a semiopen coastal area, the most common mobile symbionts on the red king crab were the amphipods Ischyrocerus commensalis and I. anguipes. In Dolgaya Bay, the hydrodynamic conditions promote the settlement of larval foulers, whose colonization leads to a decrease of the crab infestation with the mobile symbionts and changes in their distribution along the host body if compared to the more open coastal areas of Eastern Murman.  相似文献   

16.
Molecular data have shown that jellyfishes are more geographically restricted and evolutionarily divergent than previously thought. We examined genetic variation and divergence within the meroplanktonic barrel jellyfish Rhizostoma pulmo in the Mediterranean Sea; specific sampling areas were the northern Adriatic, western Mediterranean and Tunisian coast. A total of 19 sampling sites and 68 sequences of the mtDNA cytochrome c oxidase subunit I (COI) gene were used. Of the 68 COI sequences, 45 were newly collected specimens which originated from nine sampling sites along the Tunisian coast. A total of 24 haplotypes were obtained and the specimens sampled were characterised by relatively high levels of haplotype diversity (h = 0.866) and low levels of nucleotide diversity (π = 0.004). Haplotype network analysis showed the presence of three distinct phylogenetic lineages (populations), with separate geographic ranges in the northern Adriatic, western Mediterranean and Tunisian coast. The observed genetic differentiation between these three lineages was supported by the presence of significant genetic differentiation between the 19 populations (FST = 0.757, p < 0.001). The high level of genetic differentiation detected in the barrel jellyfish investigated could be attributed to either intrinsic and/or extrinsic barriers to genetic exchange between different populations that may have adapted to different environmental conditions.  相似文献   

17.
The principal features of the marine ecosystems in the Barents and Norwegian Seas and some of their responses to climate variations are described. The physical oceanography is dominated by the influx of warm, high-salinity Atlantic Waters from the south and cold, low-salinity waters from the Arctic. Seasonal ice forms in the Barents Sea with maximum coverage typically in March–April. The total mean annual primary production rates are similar in the Barents and Norwegian Seas (80–90 g C m−2), although in the Barents, the production is higher in the Atlantic than in the ice covered Arctic Waters. The zooplankton is dominated by Calanus species, C. finmarchicus in the Atlantic Waters of the Norwegian and Barents Seas, and C. glacialis in the Arctic Waters of the Barents Sea. The fish species in the Norwegian Sea are mostly pelagics such as herring (Clupea harengus) and blue whiting (Micromesistius poutassou), while in the Barents Sea there are both pelagics (capelin (Mallotus villosus Müller), herring, and polar cod (Boreogadus saida Lepechin)) and demersals (cod (Gadus morhua L.) and haddock (Melanogrammus aeglefinus)). The latter two species spawn in the Norwegian Sea along the slope edge (haddock) or along the coast (cod) and drift into the Barents Sea. Marine mammals and seabirds, although comprising only a relatively small percentage of the biomass and production in the region, play an important role as consumers of zooplankton and small fish. While top-down control by predators certainly is significant within the two regions, there is also ample evidence of bottom-up control. Climate variability influences the distribution of several fish species, such as cod, herring and blue whiting, with northward shifts during extended warm periods and southward movements during cool periods. Climate-driven increases in primary and secondary production also lead to increased fish production through higher abundance and improved growth rates.  相似文献   

18.
真江蓠是原产于西北太平洋的重要经济红藻。我们利用10对微卫星引物检测中国黄渤海地区真江蓠的群体遗传多样性和结构。10个微卫星位点在12个群体中共检测到65个等位基因，每个位点的等位基因（Na）为1~28，有效等位基因（Ne）为1.0~9.6。每个群体的平均等位基因（Na）、平均有效等位基因（Ne）、平均香浓指数（I）、平均观察杂合度（Ho）和平均预期杂合度（He）分别为2.4、1.6、0.419、0.133和0.227，显示较低的群体遗传多样性。中国黄渤海12个真江蓠群体间遗传分化较大（Fst=0.398 7），基因流有限（Nm=0.377 1），近交系数为正（Fis=0.391 3，Fit=0.634 0），表明可能存在近交和杂合子缺失现象。Structure和UPGMA系统进化分析一致将12个群体分为两个遗传组，并在黑石礁群体（HS）和石岛群体（SD）中发现明显的遗传混杂现象。AMOVA分析显示遗传变异主要来自于群体内（73.27%）。该研究可为黄渤海地区真江蓠自然资源保护和管理提供科学依据。  相似文献   

19.
Massive occurrences of jellyfish can cause direct impacts on the economy, especially on tourism and commercial fisheries. Translocation of jellyfish species by humans has caused damaging blooms in new habitats. Aurelia aurita s.l. has been introduced in many locations around the world. To test the potential success of Au. aurita s.l. in various habitats, scyphistomae from different climatic locations (Mediterranean, Red and Baltic Seas) were cultured individually for 201 days at three temperatures (14, 21 and 28 °C) with the same salinity, food and light. We tested the null hypotheses that there were no differences in survival or asexual reproduction (budding and strobilation) amongst populations [native (Mediterranean) and exotic (Red and Baltic)]. Survival of the three scyphistoma populations did not differ significantly across temperatures; however, the Red Sea group had lower survival at all temperatures than did the other populations. Most individuals strobilated at 14 °C. Red Sea scyphistomae strobilated more quickly than Baltic and Mediterranean Sea scyphistomae and produced the fewest ephyrae, whereas Baltic Sea scyphistomae produced the most. Our results indicate that Au. aurita from the Baltic or Red Seas introduced into the Northwest Mediterranean Sea would potentially persist and successfully asexually reproduce there. A new invader could even have greater asexual production than the local Au. aurita s.l. Establishment of the invaders could increase genetic variation of subsequent generations and increase their adaptability to environmental changes. Our results suggest that introduction of exotic Au. aurita s.l. populations could increase jellyfish blooms in the Mediterranean Sea.  相似文献   

20.
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