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1.
由于广泛的形态可塑性，导致刚毛藻属物种的分类仍存在不确定性。作为分布较广的物种之一，细弱刚毛藻已报道了许多变异类型，这为对其鉴定造成了困难。针对这个问题，本研究通过采集于黄海西部相似于细弱刚毛藻的9个样品，分析了它们的形态多样性。一些样品具有明显的可变鉴定特征，难于利用形态分类准确鉴定。因此，采用18S rDNA和 ITS序列对它们进行了分子鉴定。其中，样品的18S rDNA序列相似度为99.6%-100%，而ITS的为98.7% -100%。分子数据强烈地支持了形态可变的样品可准确定位为细弱刚毛藻。通过对样品分类特征的比较分析发现，作为分类标准的分枝方式和密度、藻体颜色、藻体高度和质地受环境影响和藻体成熟度而发生较大变化。此外，作为相对稳定的特征，细胞大小在种内水平上也常发生变化。18S rDNA和ITS序列在本种鉴定上的成功应用，表明以DNA条形码为基础的基因序列分析可作为传统形态分类学强有力的辅助方法。 相似文献
2.
核糖体基因簇单元全长序列对于藻类分子鉴定与分类具有重要意义,而浒苔(Ulva prolifera)作为形成我国黄海绿潮的主要物种,其核糖体基因簇单元全长序列的克隆还未见研究报道。本研究通过分子克隆技术成功扩增了浒苔的核糖体基因簇单元全长序列。浒苔核糖体基因簇单元全长序列为8 948 bp,其中18S rDNA 1 760 bp,28S rDNA 3 259 bp,ITS1 205 bp,5.8S rDNA 160 bp,ITS2 176 bp和IGS 3 388 bp。对各部分序列的碱基组成进行分析后,我们发现ITS1,ITS2和IGS序列对胞嘧啶具有明显的偏好性,而18S rDNA和28S rDNA序列对鸟嘌呤具有明显的偏好性。浒苔核糖体基因簇单元全长序列的GC含量为54.12%,其中ITS1、ITS2和IGS序列的GC含量比保守序列的GC含量高,这表明内转录单元间隔区序列和基因间间隔区序列比保守序列变异率更高,进化速率更快。另外,IGS序列中发现大量简单的直接重复序列、串联重复序列、短对称序列和回文序列。浒苔核糖体基因簇单元全长序列可为其分类及分子鉴定提供有效的工具。 相似文献
3.
为了探索北极陆域真菌的多样性,进一步揭示其生态学角色,本研究对中国第5次北极科学考察采集自黄河站区附近的24份样品进行了真菌的分离培养及鉴定,样品涂布划线后共分离得到60株真菌,其中腐殖质样品中分离到的真菌种类和数量最多;对选取的28株代表菌株进行了真菌ITS区序列鉴定,结果表明它们分属于4个纲,12个属,分别为散囊菌纲、粪壳菌纲、座囊菌纲和微藻菌纲,其中地丝霉属为优势类群。该结果表明北极地区具有丰富的真菌物种多样性。通过对代表土壤理化性质的测定,探究了真菌多样性和土壤理化参数的相关性,其中有机碳氮及可溶性营养盐含量是影响北极土壤真菌多样性的重要指标。 相似文献
4.
为探讨小球藻鉴定的新方法以及评估小球藻属 DNA 条形码候选序列的鉴定作用,文章对20株小球藻的线粒体基因细胞色素C氧化酶亚基Ⅰ(COI)、核基因组rDNA的内转录间隔区(ITS)以及核酮糖1,5-二磷酸羧化酶(rbcL)3个片段进行PCR扩增测序,并对各序列进行生物信息学分析。研究结果表明：COI、ITS和rbcL序列在20株小球藻中的扩增和测序效率均呈阳性,扩增成功率分别为76%、83%和70%;经评估,COI、ITS和rbcL序列作为DNA条形码在小球藻分类鉴定中均不适合较低的分类单位,但可参考动植物的分类方法,将多个片段组合应用,从而筛选不同进化级别的DNA条形码。 相似文献
5.
以烟台海域引发"绿潮"的浒苔为研究对象,采用PCR技术扩增出浒苔的ITS-1、5.8SrDNA及ITS-2片段,将扩增出的片段纯化后克隆至pGEM-TEasy载体,筛选阳性克隆进行序列测定。结果表明,浒苔的ITS-1序列长度为195bp,5.8S序列为155bp,ITS-2序列为181bp,该序列与浒苔属的多种物种ITS序列具有很高的同源性,在ITS-1区、5.8SrDNA区和ITS-2区仅存在4个转换/颠换位点。结合GenBank注册序列和本研究的结果发现,单纯依靠ITS序列并不能对浒苔属种类进行有效的分类鉴定。 相似文献
6.
对引发赤潮的3株硅藻——1株尖刺拟菱形藻(Pseudo-nitzshia pungens)和2株中肋骨条藻(Skeletonema costatum)的5.8SrDNA和ITS(internal transcribed spacers)序列进行了PCR扩增、克隆和序列测定,并分析了硅藻门10株赤潮藻(7株从GenBank获得)的系统进化关系.研究结果表明,尖刺拟菱形藻的ITS和5.8SrDNA的长度为693bp,SK-1(分离自东海赤潮暴发区)测序得到715bp,除ITS和5.8SrDNA外,还包含部分18SrDNA和28SrDNA;SK-2(分离自青岛养殖场)的ITS和5.8SrDNA的长度为331bp,尖刺拟菱形藻与从GenBank中获得的2株尖刺拟菱形藻相似程度最高,为100%,与该属的多列拟菱形藻相似程度稍低,为82.9%.SK-2的ITS序列与SK-1的相似程度很低,只有51%,但与拟中肋骨条藻的ITS序列相似程度高,为95.5%.SK-1的ITS序列与拟中肋骨条藻的相似程度也低,为56.7%.系统进化树反映的结果与相似性反映的结果一致.研究的该株尖刺拟菱形藻从根据ITS序列研究的结果与形态鉴定的结果看是一致的;SK-2可能属于拟中肋骨条藻;SK-1比较特殊,有待于用其他的方法进一步研究确定其分类地位. 相似文献
7.
在海藻的分类系统上,由于海洋的开放环境和人为因素的影响,单凭藻体的形态、结构特征很难得到统一的结论,因此探求一种能够有效补充传统分类方法的新手段具有十分重要的意义[1-2]。随着分子生物学技术的不断发展和完善,为分类学和系统学研究提供了许多新方法。分子生物学技术如RAPD[3-4],RFLP,AFLP,CAPS,SSLPs,SNPs等技术为海洋绿藻的分子系统学的研究提供了可靠的分子标记资料,其中核糖体rDNA ITS区(包括ITS1,5.8S和ITS2)序列被广泛用于不同物种的种间,亚种和种群水平上的系统发生的研究[5-12]。 相似文献
8.
南极菲尔德斯半岛可培养土壤微生物多样性及理化性质鉴定 总被引：2，自引：1，他引：1
为了探索南极可培养土壤微生物的多样性,本研究对中国第31次南极科学考察采集自南极菲尔德斯半岛的5份土壤样品进行了细菌、真菌的分离培养。选择形态差异较大的细菌和真菌进行了16S rDNA和ITS鉴定及系统发育分析。最终共鉴定得到20个属的33株细菌和6个属的8株真菌,其中8株细菌,10株真菌序列相似性较低,可能是新种。该结果表明南极菲尔德斯半岛地区具有丰富的微生物多样性,其中假单胞菌属的细菌居多。对分离得到的细菌和真菌分别进行理化性质和胞外酶活性鉴定,实验结果显示,分离获得的细菌和真菌绝大多数可产生水解酶类并同化多种碳源。初步认定这些微生物在参与南极物质代谢、适应南极极端环境方面发挥作用。本研究丰富了对南极菲尔德斯半岛可培养土壤微生物多样性的认识,并筛选获得了一些产低温酶特性的菌株,这为极地微生物资源的利用研究奠定了基础。 相似文献
9.
绿潮爆发后在青岛沿海潮间带采集了12株石莼属绿藻,形态学结合分子生物学手段对这些绿藻进行多样性鉴定。经过PCR扩增获得了12株藻的核糖体转录间隔区(ITS)序列以及完整的5.8SrDNA序列。经过序列分析发现,不同藻株的ITS区域在序列长度上存在差异;G+C含量也存在差异,但是都处于较高的水平,最高的接近72%。ITS区域多序列比对结果及系统发育分析显示这些藻株存在种的多样性,而且由分子鉴定得出的多样性与形态上呈现的多样性并不完全一致。本研究结果显示在青岛海域绿潮爆发后石莼藻类仍然存在较好的多样性。 相似文献
10.
11.
Previous research has suggested that competitive bottlenecks may exist for the Mediterranean grey mullets (Osteichthyes, Mugilidae) at the fry stage with the exotic Cyprinus carpio (Osteichthyes, Cyprinidae) playing a central role. As a consequence, the structure of grey mullet assemblages at later stages is thought to reflect previous competition as well as differences in osmoregulatory skills. This paper tests that hypothesis by examining four predictions about the relative abundance of five grey mullet species in 42 Western Mediterranean estuary sites from three areas (Aiguamolls de l'Empordà, Ebro Delta and Minorca) differing in the salinity level and occurrence of C. carpio. Field data confirmed the predictions as: (1) Liza aurata and Mugil cephalus were scarce everywhere and never dominated the assemblage; (2) Liza saliens dominated the assemblage where the salinity level was higher than 13; (3) Liza ramado always dominated the assemblage where the salinity level was lower than 13 and C. carpio was present; and (4) Chelon labrosus dominated the assemblage only where the salinity level was lower than 13 and C. carpio was absent. The catch per unit effort of C. labrosus of any size was smaller in the presence of C. carpio than where it had not been introduced, which is in agreement with the juvenile competitive bottleneck hypothesis. Discriminant analysis confirmed that the assemblage structure was linked to the salinity level and the occurrence of C. carpio for both early juveniles and late juveniles as well as adults. The data reported here reveal that the structure of grey mullet assemblages inhabiting Mediterranean estuaries is determined by salinity and competitive interactions at the fry stage. 相似文献
12.
泥蚶、缢蛏和僧帽牡蛎呼吸与排泄的周年变化 总被引：1，自引：1，他引：0
于2005年5月至2006年3月对浙江沿岸重要的3种经济贝类泥蚶、缢蛏和僧帽牡蛎的呼吸率与排泄率进行了周年研究。结果表明:泥蚶、缢蛏和僧帽牡蛎耗氧率的变化范围分别为0.11~5.05 mg/（g·h）、0.77~5.97 mg/（g·h）和0.33~5.47 mg/（g·h）,排氨率的变化范围分别为21.51~1 078.63 μg/（g·h）,26.97~990.73 μg/（g·h）和32.12~1 378.67 μg/（g·h）;耗氧率与排氨率9月份最高,1月份最低。经单因素方差分析发现,3种实验贝类月际间的耗氧率与排氨率均存在极显著差异（p<0.01）,经配对T检验发现,缢蛏（SC）和僧帽牡蛎（SCA）之间的耗氧率存在着显著差异T（SC-SCA）=3.184,p=0.024）,泥蚶（TG）与缢蛏、僧帽牡蛎的耗氧率之间都不存在差异（T（TG-SC）=1.887,p=0.118;T（TG-SCA）=0.246,p=0.815）,泥蚶、缢蛏和僧帽牡蛎之间的排氨率的差异均不显著（T（TG-SC）=0.977,p=0.373;T（TG-SCA）=2.369,p=0.064;T（SC-SCA）=1.002,p=0.362）。3种贝类的耗氧率与排氨率均随温度的升高而升高,经回归分析发现,耗氧率和排氨率与温度的变化均呈较显著的幂指数性相关lnY=lna+blnT（Y=aebT）。泥蚶呼吸排泄O:N变化范围为4.69~28.55,缢蛏和僧帽牡蛎的O:N变化范围分别为:4.68~37.89和3.04~10.27。 相似文献
13.
Whaling as a commercial enterprise is now defunct, not least due to the moratorium placed on it by the International Whaling Commission (IWC) almost 20 years ago. However, two distinct groups, one in favor of ‘sustainable’ whaling and one completely opposed to any killing of whales, continue to argue at the IWC and other political arenas. Almost ignored in this debate is the current growth of the whale watching industry, a logical alternative use for whale populations. Based on ecological and socio-economic criteria, the potential for whale watching is estimated for maritime countries that do not currently engage in this industry. Results suggest that whale watching could generate an additional 413 million USD (2009) in yearly revenue, supporting 5,700 jobs. Together with current global estimates, this would bring the total potential for the whale watching industry to over 2.5 billion USD in yearly revenue and about 19,000 jobs around the world. These results are discussed from an economic and conservation policy perspective, with emphasis on potential benefits and limitations. 相似文献
14.
本研究基于线粒体DNA分子标记NADH脱氢酶亚基1基因(ND1)部分序列分析了印度-西太平洋海域的胡椒鲷属及少棘胡椒鲷属共16种胡椒鲷鱼类的系统进化关系。采用最大简约法及最大似然法构建了系统进化树。进化树上,16种胡椒鲷鱼类共形成两个形态特征截然不同的类群,其中类群一的种类体表具有各种鲜艳的颜色与多变的斑纹,主要分布在西太平洋地区;类群二的种类颜色灰暗单一,少数体表具有暗色斑点与条纹,大多数分布在印度洋地区。此外,进化树上,少棘胡椒鲷属的种类都位于胡椒鲷属的类群一内部,与斑胡椒鲷,暗点胡椒鲷形成的姐妹种有较近的亲缘关系。基于遗传距离的数据,少棘胡椒鲷属与胡椒鲷属间的平均遗传距离小于胡椒鲷属内部种间的遗传距离,显示出少棘胡椒鲷属与胡椒鲷属有非常近的亲缘关系,支持少棘胡椒鲷归类于胡椒鲷属的观点。 相似文献
15.
Ismael A. Kimirei Ivan Nagelkerken Ben Griffioen Coen Wagner Yunus D. Mgaya 《Estuarine, Coastal and Shelf Science》2011
Tropical shallow-water habitats such as mangroves and seagrass beds are widely acknowledged as important juvenile habitats for various coral reef fish species, most of which are commercially important to fisheries. Spatio-temporal variability in ontogenetic habitat use by fish among these tropical coastal ecosystems has rarely been investigated, yet there are sufficient reasons to believe that this plays an important role. In the present study, we test the spatio-temporal variability in patterns of ontogenetic habitat use by some mangrove/seagrass-associated coral reef fishes (Lethrinus harak, Lethrinus lentjan, Lutjanus fulviflamma and Siganus sutor). Abundances of these four species were investigated during two years in Tanzanian coastal waters, using underwater visual census in mangrove, seagrass, shallow and deep mudflat, and shallow and deep coral reef habitats. The study covered four distinct seasons of the year and was done at two spatially separated (>40 km) locations. Averaged across locations, seasons and years, juveniles (≤10 cm length) of the four study species had significantly higher relative densities in shallow-water (mangroves and seagrass beds) than in deep-water habitats (deep mudflats or coral reefs), whereas the opposite pattern was found for the adults (>15 cm). These findings suggest a strong and general pattern of ontogenetic habitat shifts from shallow- to deep-water habitats. However, specific habitat-use patterns of juveniles as well as adults differed significantly in time and space. Various species showed subtle to considerable flexibility in juvenile as well as adult habitat use across seasons, years, or at different locations. Furthermore, for some species the data suggest presence of ontogenetic habitat shifts at one location but lack thereof at the other location. In summary, ontogenetic habitat use needs to be considered at various spatial and temporal scales for the interpretation of habitat utilization by fish during different life stages. This is important for conservation and management of these habitats, as essential habitats or seasons may be ignored or over-emphasized with respect to their importance for fish during different parts of their life cycle. 相似文献
16.
To investigate feeding habits of juvenile flounder (Platichthys flesus) and turbot (Psetta maxima) in relation to habitat characteristics a field survey with push net sampling was conducted in nursery areas with different ecological characteristics in the northern Baltic proper. Sampling sites were stratified to cover several different habitat types defined by substrate and wave exposure. Apart from flatfishes and epifauna, samples of macrofauna, meiofauna and hyperbenthic planktons were collected from each site together with data on vegetation, depth, salinity, temperature and turbidity. The diet differed between species where flounder diet was dominated by chironomids, copepods and oligochaetes while turbot apart from chironomids had a high incidence of amphipods, gobies and mysids. In both species there was a shift in diet with size, although this shift was influenced by the habitat. Among the environmental variables investigated, wave exposure was found to significantly influence flounder diet. Food preference in the most exposed areas was dominated by oligochaetes and copepods instead of chironomids, which dominated in sheltered areas. This study shows that habitat characteristics can have a major influence on feeding habits of juvenile flatfish. 相似文献
17.
The decoupling of trophic interactions could be one of the severe consequences of climate warming in aquatic systems. The timing of phytoplankton blooms, in particular, can affect competition within the plankton community as well as food-web interactions with zooplankton and fish. Using long-term data from Helgoland Roads in the southern North Sea, we examine diatom seasonality, using three representative diatom species combined with environmental and copepod time series over the last four decades. The long-term annual abundances of Guinardia delicatula, Thalassionema nitzschioides and Odontella aurita exhibited interannual variations and dissimilar cyclic patterns during the time period under study (1962-2008). Of the three diatoms, G. delicatula showed a significant trend towards earlier bloom timings for 1962-2008 and a later decline of its abundance over time was found. Grazing and water transparency explained most of the bloom timing fluctuations of the diatoms considered. The annual timing of occurrences of each diatom species was correlated with their preceding concentrations. Earlier bloom timings occurred when autumn/winter concentrations were higher than average and later bloom timings occurred when autumn/winter concentrations were lower than average. Different environmental and predation variables related to the diatom bloom timings were found suggesting that climate warming might not affect the onset of the blooms of the three diatom species in the same manner. The results of the multiple linear regression analyses showed that the timings of decline of the three diatoms were mainly correlated with decreasing nutrient concentrations. Sunshine duration could prolong the duration of the blooms of T. nitzschioides and O. aurita provided that enough nutrients were available. In the case of G. delicatula, however, sunshine duration was negatively correlated with its end of the growth period. G. delicatula and T. nitzschioides showed later decreases in abundances under warmer spring and summer temperatures. Such species specific differences in the sensitivity to the forcing variables could lead to shifts in community structure and could ultimately have wider implications to the overall ecosystem health of the North Sea. 相似文献
18.
研究了实验室条件下原油水溶性组分(WSF)暴露对黑鲷、黄鳍鲷和褐菖鲉肝微粒体EROD活性的剂量-效应,时间-效应和恢复过程。实验结果表明,在剂量诱导实验中,褐菖鲉肝EROD活性在原油WSF浓度为50 μg/dm3时呈现生物统计学上的显著差异,而黑鲷和黄鳍鲷肝EROD活性在75 μg/dm3时才呈现生物统计学上的显著差异;褐菖鲉肝EROD活性诱导倍数最高,但黑鲷的诱导浓度范围较广。在时间诱导实验中, 在40 μg/dm3原油WSF暴露下黄鳍鲷肝EROD活性在2 d时首先呈现显著差异; 三种鱼肝EROD活性均在第4天达到最高,并呈现显著性变化,此后随着暴露时间的延长而逐渐下降并接近对照组水平。在恢复实验中三种鱼肝EROD活性下降并恢复到对照组水平。研究结果表明:对于石油污染物,黑鲷、黄鳍鲷和褐菖鲉肝EROD活性都可以作为污染生化效应监测指标,然而就三种鱼类比较而言,褐菖鲉最敏感,更适合于作为石油类污染及其生化效应,尤其是低剂量效应的监测生物。 相似文献
19.
A study of the mesoscale distribution of phytoplankton communities observed along the Portuguese upwelling coast in 1985–1986 made it possible to identify an assemblage composed by the coccolithophores Helicosphaera carteri, Syracosphaera pulchra and Coronosphaera mediterranea. The assemblage was consistently present in the coast in the following years (1991, 1992, 1994, 2003 and 2005) and from 1992 onwards, Rhabdosphaera clavigera was recognised as being part of it, although in low concentrations During late summer, this group of species showed higher affinities with upwelling waters of subtropical origin (ENACWst) on the SW coast. At the end of the upwelling season, in autumn, the assemblage was advected to the NW shelf due to the intensification of the poleward surface circulation or meridional seasonal changes of environmental conditions. The species maximum abundances were not coincident in space: H. carteri developed at the central part of the western coast while blooms of S. pulchra and C. mediterranea generally occurred further south, such as at the upwelling centre of cape S. Vicente. Syracosphaera pulchra blooms were characterised by lower concentrations of C. mediterranea and vice-versa. The above patterns were recurrent along the years but the relative abundance of each species appeared related to the interannual variability of physical conditions as the upwelling. 相似文献
20.
真鲷、黑鲷及其杂交子代的染色体构成与AFLP分析 总被引：1，自引：0，他引：1
采用核型分析和AFLP技术对真鲷、黑鲷及其杂交子代进行遗传差异分析。结果显示真鲷、黑鲷和杂交子代均含有48条染色体,核型分别为2n=2st+46t,NF=48、2n=4m+4sm+2st+38t,NF=56和2n=30m+8sm+2st+8t=48,NF=86,杂交子代核型与其父、母本种均不一致。两对AFLP选扩引物组合在真鲷、黑鲷和杂交子代中共扩增到278个条带,其中黑鲷特异性条带93条、真鲷特异性条带108条;杂交子代中分别出现了21条父本种(黑鲷)特异条带和67条母本种(真鲷)特异条带,另出现了15条非双亲条带。杂交子代与真鲷、黑鲷的遗传相似系数和遗传距离分别为0.113、0.350和2.180、1.050,表明杂交子代总体上更偏向于母本种。染色体核型和AFLP条带分析结果表明真鲷(♀)×黑鲷(♂)所获得的杂交子代为含有48条染色体的异源二倍体,且父、母本遗传物质在杂交中发生了部分重组,杂交子代表现出一定的偏母系遗传特性。 相似文献