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1.
Partial rDNA sequences of Prorocentrum minimum and Takayama pulchella were amplified,cloned and sequenced,and these sequence data were deposited in the GenBank.Eight oligonucleotide probes(DNA probes)were designed based on the sequence analysis.The probes were employed to detect and identify P.minimum and T. pulchella in unialgal and mixed algal samples with a fuorescence in situ hybridization method using flow cytometry.Epifluorescence micrographs showed that these specific probes labeled with fluorescein isothiocyanate entered the algal cells and bound to target sequences,and the fluorescence signal resulting from whole-cell hybridization varied from probe to probe.These DNA probes and the hybridization protocol we developed were specific and effective for P.minimum and T. pulchella,without any specific binding to other algal species.The hyrbridization efficiency of difierent probes specific to P.minimum was in the order:PMl8S02＞PM28S02＞PM28S01＞PM18S01,and that of the probes specific to T. pulchella was TP18S02＞TP28S01＞TP28S02＞TP18S01.The djfferent hybridization efficiency of the DNA probes could also be shown in the fuorescent signals between the labeled and unlabeled cells demonstrated using flow cytometry.The DNA probes PM18S02,PM28S02,TPl8S02 and TP28S01,and the protocol,were also useful for the detection of algae in natural samples. 相似文献
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HOU Jianjun LAI Hongyan HUANG Bangqin CHEN Jixin College of Fisheries Huazhong Agricultural University Wuhan China College of Life Sciences Hubei Normal University Huangshi China State Key Laboratory of Marine Environmental Science Environmental Science Research Center Xiamen University Xiamen China Key Laboratory of Freshwater Fish Germplasm Resources Biotechnology Yangtse River Fisheries Research Institute Jinzhou China State Key La... 《海洋学报(英文版)》2009,28(2)
Partial rDNA sequences of Prorocentrum minimum and Takayama pulchella were amplified, cloned and sequenced, and these sequence data were deposited in the GenBank. Eight oligonucleotide probes (DNA probes) were designed based on the sequence analysis. The probes were employed to detect and identify P. minimum and T. pulchella in unialgal and mixed algal samples with a fluorescence in situ hybridization method using flow cytometry. Epifluorescence micrographs showed that these specific probes labeled with flu... 相似文献
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Chromosomal localization of the major ribosomal RNA genes in scallop Chlamys farreri 总被引：3，自引：1，他引：3
HUANG Xiaoting BAO Zhenmin BI Ke HU Jingjie ZHANG Can ZHANG Quanqi HU Xiaoli 《海洋学报(英文版)》2006,25(3):108-115
1IntroductionThe class bivalvia includes many well-knownmarine invertebrate species because they play impor-tant roles in aquaculture.Most cytogenetic studies ofbivalvia have focused primarily on chromosome num-ber and gross morphology(Insua et al.,1998).… 相似文献
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CHEN Guofu WANG Quanfu ZHANG Chunyun ZHANG Baoyu WANG Guangce LU Douding XU Zhong YAN Peishen 《海洋学报(英文版)》2013,32(2):66-75
Harmful algal blooms recently have been under the spotlight throughout the world, because of their negative impact on the marine environment, aquaculture, fisheries as well as public health. The development of methods for rapid and precise identification and quantification of causative species is essential for the warning and monitoring of blooms, among which the techniques based on taxonomic probes are the most favored. In this study, two harmful algae, i.e., Prorocentrum minimum and Karenia mikimotoi were taken into consideration. The partial large subunit rDNA (D1-D2) of both species were firstly PCR-amplified, cloned and sequenced. The obtained sequences were then introduced to carry out alignment analysis for gene specific regions. Three respective candidate probes for each species were designed and used to screen the optimal probe by performing fluorescence in situ hybridization (FISH) tests. The results showed that the probes Pmin0443 and Kmik0602 displayed the best hybridization for P. minimum and K. mikimotoi, respectively. Both the specific (taxonomic) (Pmin0443 and Kmik0602) and the control probes (UniC0512 and UniR0499) were used for cross-reactivity tests with other microalgae in our laboratory. The probes Pmin0443 and Kmik0602 are specific and could be served as taxonomic probes introduced into the techniques targeting rRNA, such as FISH, sandwich hybridization, and DNA-microarray assay of P. minimum and K. mikimotoi in the future. Finally, FISH analyses with both probes were performed on the simulated field samples. The probes could hybridize exclusively with the target cells well, and no significant difference (p >0.05) was observed in the cell densities of the samples determined by FISH and light microscopy (LM). All suggest that the probes are specific and could be introduced into FISH for the monitoring of both harmful algae. 相似文献
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用双特异探针技术定性定量分析微型原甲藻 总被引：5，自引：0，他引：5
针对微型原甲藻核糖体大亚基和小亚基RNA分别设计了大亚基探针(LSU probe)和小亚基探针(SSU probe),发展了对微型原甲藻进行定性和定量分析的双特异探针技术.分析数据表明针对微型原甲藻核糖体大亚基RNA的LSU probe能够特异地将微型原甲藻和其他7种微藻分开,而且检测信号的强弱在一定的范围内与细胞数呈线性关系;由于针对微型原甲藻核糖体小亚基的SSU probe探针由于与具齿原甲藻存在核酸序列一致性,该探针与具齿原甲藻有严重的交叉反应,但未发现与海洋原甲藻和其他藻的交叉反应.另外,研究还优化了破碎微型原甲藻细胞所需的超声时间以及获得探针的特异性所需的S1酶反应温度.本研究为实现对微型原甲藻海水样品的快速准确监测奠定了基础. 相似文献
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海洋线虫是海洋底栖生物中数量上最丰富的类群,在海洋生态系统中起着重要的作用。对海洋线虫进行种类鉴定是线虫研究中最重要的工作之一。目前,海洋线虫的鉴定主要采用形态学的分析方法,但是这种方法往往费时费力,对于如此丰富的物种,急需新的鉴定方法。作者以黄海潮间带自由生活线虫优势种——中华钩线虫(Oncholaimus sinensis)为例,在形态学分类的基础上,将DNA条形码技术引入线虫的鉴定中,探讨了线粒体细胞色素C氧化酶第一亚基(mt COI)基因序列、28S r DNA序列的D2D3区以及18S r DNA序列的部分序列作为DNA条形码在中华钩线虫中的适用性。结果表明,18S r DNA序列可作为该种线虫的DNA条形码,为海洋线虫的DNA条形码研究提供了很好的借鉴。目前,利用DNA条形码技术对海洋线虫进行鉴定的报道在国内还属空白,本研究将是海洋线虫分类学研究的很好补充。同时,对于了解该海域海洋线虫多样性及群落分布格局,开展海洋环境监测,进而对海洋的底质环境状况进行健康评价具有十分重要的科学意义。 相似文献
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米氏凯伦藻作为我国沿岸典型的有毒赤潮甲藻,近年来赤潮频度越来越密,赤潮规模越来越大,持续时间也越来越长,造成了严重的经济损失,并且威胁到海洋生态系统的健康。众多研究表明藻际细菌可能是影响赤潮生消与有毒藻产毒的关键生物影响因子。为揭示米氏凯伦藻共培养菌群的物种多样性信息,本文通过高通量测序技术手段,分析了我国沿岸产米氏凯伦藻(Km02)共培养菌群的种类、丰度、多样性及系统发育信息。结果显示,米氏凯伦藻(Km02)共培养菌群共有40个种与已有数据库匹配,隶属于4个门(Phylum),11个纲(Class),21个目(Order),26个科(Family),37个属(Genus)。其中优势菌属有8个(5%),分别为Balneola(20.28%)、 Marinobacter(19.25%)、Rhodobacteraceae科下的未知属(13.15%)、Alteromonas (8.88%)、Methylophaga (8.17%)、Thalassospira(6.24%)、Reichenbachiella (5.92%)及Mesoflavibacter (5.41%)。研究结果表明我国沿岸产米氏凯伦藻(Km02)含有生物多样性较高的共培养菌群,且具有探寻未知海洋细菌的潜力,同时该研究结果也为未来更进一步研究细菌群落对米氏凯伦藻赤潮暴发与消亡,以及产毒特性等机制的研究提供了实验方法与奠定了理论基础。 相似文献
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我们通过荧光染色、自身基因组原位杂交（Self-GISH）和多色荧光原位杂交（FISH）,首次研究了棘头梅童鱼（Richardson,1844）的核型特征。雌性核型有24对端部着丝粒染色体（2n=48a,NF=48）,而雄性核型包含22对端部着丝粒染色体,2条端部着丝粒染色体单体和1条中间着丝粒染色体（2n=1m+46a,NF=48）。雌性和雄性核型之间的差异表明,棘头梅童鱼的性染色体系统为X1X1X2X2/X1X2Y型,其中Y为雄性中特有的中间着丝粒染色体。三色FISH结果显示,5S rDNA和18S rDNA位点定位在最大的端着丝粒染色体（X1）以及Y染色体的短臂;X1染色体上有一个特异的臂间端粒信号（ITS）,与5S rDNA位点部分重叠。Self-GISH结果显示,在推定的性染色体DNA重复序列聚集。根据实验结果我们提出关于棘头梅童鱼Y染色体起源的假说：Y染色体起源于祖先核型（2n=48a）中的两条端部着丝染色体融合,并且在此过程中伴随着片段缺失。本研究首次在石首鱼科中描述了异形的性染色体,将为其他石首鱼的性染色体研究提供线索。 相似文献
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The main objective of this study was to investigate toxic effects of the dinoflagellate Alexandrium species,on cladocera Moina mongolica in the laboratory.Ten strains of Alexandrium species,including Alexandrium tamarense(AT-6,ATHK,ATCI02,ATCI03 and AT5-1),A.catenella(ACDH),A.affine(AC-1 and AS-1),A.lusitanicum and A.minutum were tested.The results showed that A.tamarense(ATHK,ATCI02 and AT5-1) and A.affine(AC-1 and AS-1),but not A.tamarense(AT-6 and ATCI02),A.catenella(ACDH),A.lusitanicum and A.minutum had significantly negative effects on the survival of M.mongolica;when exposed to these ten strains of Alexandrium species in densities of 3 000 cells/cm 3 for 7 d,respecyively.M.mongolica could feed on A.tamarense(AT-6,ATHK,ATCI02,ATCI03 and AT5-1),A.catenella,A.lusitanicum and A.minutum,but exhibited little or no grazing on A.affine(AC-1 and AS-1),based on the changes in gut pigment after exposure to alga for 1 and 12 h.A.affine AC-1,which had the strongest toxicity on the survival of M.mongolica,was chosen to further study the negative effects on M.mongolica.The results showed that the effect of A.affine AC-1 on the survival of M.mongolica was density-dependent,and its lethal effects on one-day,two-day and three-day old M.mongolica were exacerbated with increasing age;The whole algal culture,re-suspended algal cells,cell fragments and cell contents all had adverse impacts on the survival of M.mongolica.Moreover,both juvenile numbers and life-span time of M.mongolica were decreased significantly when they were cultured in A.affine AC-1 of 10 and 50 cells/cm 3 ,combined with 3 × 10 6 cells/cm 3 of Chlorella spp.,respectively.As a non-PSP producer,A.affine may produce other toxins,responsible for the strong negative effects on M.mongolica. 相似文献
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Analysis on genetic diversity of mangrove species of Sonneratia and relationship to plant introduction 总被引：2，自引：0，他引：2
INmprvMangroves, the intertida1 ecosysterns occurring primariIy in the tropicaI and subtropical re-gbo amind the world, are valuable natural resoutces with high preductivity and unique wet-land habitat. These plants, which are either bushy shrubs or small-tcrlarge tou with me as-axiated herbacoous species, are of great significance because of their potential in protectingcoastlines by preventing sea water inundation; purging the environmental polution; and main-taining coasta1 ecolOgical bala… 相似文献
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A total of 117 agar-decomposing cultures were isolated from coastal seawater around Qingdao,China.The phenotypic and agarolytic features of an agarolytic isolate,QM38,were investigated.The strain was gram negative,strictly aerobic,curved rod and polar flagellum.On the basis of several phenotypic characters,biochemical and morphological characters and phylogenetic analysis of the gene coding for the 16S rRNA,the strain was identified as Agarivorans albus strain QM38.This strain can liquefy the agar on the solid agar plate.An excellular agarase activity was determined in liquid culture.The enzyme exhibited maximal activity at 40℃,pH 7.6.Its activity was greatly affected by different concentrations of agarose.The highest activity 32 U/ml was achieved in the culture supernatant.The hydrolytic product was analyzed by fluorophore-assisted carbohydrate electrophoresis (FACE).After complete hydrolysis of agarose,a series of agaro-oligosaccharides were produced.The main products of the enzymes were oligosaccharides in the degree of polymerization (DP) of 2,4,6 and 8.Three genes agaD01,agaD02 and agaD03,encoding β-agarases,had been cloned from genomic DNA of Agarivorans albus strain QM38.The open reading frame of agaD01,consisted of 2 988 bp,and shared 95.5%-98.9% identity to the β-agarase genes of some strains of Vibrio and Agarivorans.Gene agaD02 comprised 2 868 bp and encoded a 955-amino-acid protein.It showed 97.4% and 98.7% identity to the β-agarase genes of strain Vibrio sp.PO-303 and strain Vibrio sp.JT0107,respectively.Only partial sequence of agaD03 gene has been cloned.It showed 96.5% identity to β-agarase gene (agaB) of Pseudoalteromonas sp.CY24,and shared 96.8% identity to β-agarase-c gene of Vibrio sp.PO-303. 相似文献
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尽管18S rRNA基因序列极其保守,但是在一些种类中仍然发现其存在序列多态性。本研究在线纹舌鳎18S rRNA基因中发现了3种差异显著的序列类型（Type A,B和C）,说明其为非协同进化,而不是严格遵循协同进化方式。基于以上三种类型序列GC含量、二级结构、最小自由能等差异,我们推测Type A和B可能是假基因类型。此外,在Type A类型中还发现了一段长达189 bp的重复序列。据我们所知,如此长的重复序列,这在硬骨鱼类核糖体基因中还是首次报道。通过比较分析产生重复序列常见的模型,我们认为不等交换模型最有可能解释该重复序列的形成。本研究结果不仅为不等交换模型提供了罕见的分子证据,而且为鱼类18S rRNA基因研究奠定了很好的基础。 相似文献
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敌百虫是使用最为广泛的有机磷农药之一,在水产养殖中主要用于防治甲壳类寄生虫。本文研究了72 h的急性暴露以及25 d的亚慢性暴露下,敌百虫对两种赤潮微藻海洋卡盾藻和锥状斯氏藻生长的影响,以了解敌百虫对海洋微藻的毒性及海洋初级生产力的影响。在急性暴露下,高质量浓度敌百虫能明显抑制两种藻细胞的生长,而低质量浓度则对藻细胞的生长影响不明显,敌百虫对海洋卡盾藻和锥状斯氏藻生长的72 h EC50分别为32.1 mg/L和22.1 mg/L。在亚慢性暴露下,两种藻细胞对敌百虫的敏感性相近,高质量浓度组(25 mg/L)的藻细胞在暴露的第7~9天就全部死亡;1 mg/L的低质量浓度组,藻细胞的生长状况与对照组相近;5 mg/L和10 mg/L质量浓度组在暴露初期对藻细胞生长具有抑制作用,但在暴露后期则明显刺激了藻细胞的生长。本研究说明水环境背景质量浓度下的敌百虫不会抑制浮游植物的生长,但施药一段时间后,可刺激藻细胞的生长,从而增加了引发赤潮的风险。 相似文献
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近年来,随着对抑藻微生物认识的深入,利用藻-菌相互作用控制有害藻华展现出极大的应用前景。在前期改性粘土治理有害藻华方法的基础上,首次将不同种类的微生物与传统的改性粘土复合,研究了不同的复合比例、制备方式等对典型有害藻华生物——东海原甲藻(Prorocentrum donghaiense)去除效率的影响,初步探讨了其作用机制。结果表明:菌密度1.5×1010 cells/L的EM菌(effectivemicroorganisms,有效性微生物)及其滤液可以有效去除东海原甲藻;利用EM菌对粘土进行复合改性处理可以进一步提高改性粘土的除藻能力,呈现出1+12的效果。在适宜范围内,增加熟化时间与温度有利于复合改性粘土除藻效率的提升。文章进一步分析探讨了EM菌复合改性粘土的除藻机制,认为改性粘土通过富集EM菌和分泌的抑藻物质,增加了其对微藻的直接和间接除藻作用;适宜的熟化温度和熟化时间可促进EM菌的繁殖及其在改性粘土上的吸附,有利于复合改性粘土去除效率的提升。上述研究结果为改性粘土治理有害藻华技术的进一步提升和完善提供了新的探索。 相似文献
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Wang Bin Jia Jianhang Shi Jinfeng Chen Yihu Jin Demin Xu Pu Mei Junxue Weng Manli 《海洋学报(英文版)》2001,20(3):401-407
ImpIONPorghyra is one of the most important rnarine a1gae with glObal distribution and importanterenomic value. AIthOtJgh the yield of POrPhpo is lower than that of kelp, the output valueof Porghpp occupies the first place in rnarine algae in China. The traditional taxonomy ishanly had on the morpbolOgical characteristics, such as the morpbobeical traits size, rnar-gin celIs and the number of repnductive cells. However, most of morPhobeical traits are af:fected by environrnntal factOrs … 相似文献
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