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1.
Patterns of bivalve larvae dispersal in the deep Ahe atoll lagoon was studied by using a numerical 3D transport model (MARS3D) coupled with a vertical swimming sub-model, forced mainly by tide and wind-induced currents. The simulations were validated against observations of larval dispersal monitored several days throughout the lagoon. Connectivity matrices describing larval exchanges inside the lagoon were inferred. Larvae displayed a significant dispersal capacity at the lagoon scale, especially with dominant eastern winds. With southeastern winds, larvae mostly remained in their origin sector. The total export rate of the larvae, toward the ocean through the pass and shallow lagoon borders, was independent of the wind conditions, with 1% of the total concentration exported per day. However, the tide-driven currents efficiently flushed larvae in sectors close to the pass. Connectivity matrices suggest that the south and west sectors were more suitable for spat collecting and that central sectors would be efficient sanctuaries if genitors were accumulated. 相似文献
2.
Progress on deep circulation and meridional overturning circulation in the South China Sea 总被引：2，自引：0，他引：2
DongXiao Wang JinGen Xiao YeQiang Shu Qiang Xie Ju Chen Qiang Wang 《中国科学:地球科学(英文版)》2016,59(9):1827-1833
The deep overflow through the Luzon Strait drives the cyclonic deep circulation in the South China Sea (SCS). In the mean time, the intruding Pacific deep water transforms and upwells due to enhanced diapycnal mixing in the SCS. Both processes greatly contribute to the SCS meridional overturning circulation (SCSMOC). At the same time, both the deep circulation and meridional overturning circulation are modulated by rough topography in the SCS. Furthermore, the spatial structure of the SCSMOC infers a link between the upper-layer circulation and deep circulation in the SCS. This paper reviews recent advances in the SCS deep circulation and meridional overturning circulation, including the driving mechanism of the SCS deep circulation and its modulation by topography, as well as the spatial structure of the SCSMOC and its dynamical mechanism. 相似文献
3.
We investigated the hydrochemistry of a complex karst hydrosystem made of two carbonate units along a coastal lagoon. Ground water emerges on the lagoon floor from a submarine spring. In addition, thermal waters circulate through the limestone and mix with karst water near the lagoon shore. A distinction between the water from the two carbonate units is related to marine influences and human activities. In one of the massifs, the data show an incongruent dissolution of dolomite with time. In the other system, a slight contamination by saline fluids from the thermal reservoir has led to high calcium and magnesium concentrations. 36Cl, 14C, and 3H data constrain the residence time of the water, and allow for the distinguishing of four circulation types: (1) shallow surface circulation (primarily above sea level) in the karstic units with short residence times (<20 years); (2) shallow subsurface circulation (approximately 0 to -50 m) below the karstic units with residence time in the order of 50 years; (3) deep circulation at depth of 700 to 1500 m in the Jurassic limestones below thick sedimentary cover, with residence time of several thousand years for a part of the water; and (4) deep circulation at a depth of approximately 2500 m, which represents the thermal reservoir in the Jurassic units with residence time of approximately 100,000 years. An interpretative hydrogeological framework is based on the constraints of the geochemical analyses of the deep thermal system, and by water flow from the surface to the deep parts of the carbonate formations. 相似文献
4.
Charpy L Rodier M Fournier J Langlade MJ Gaertner-Mazouni N 《Marine pollution bulletin》2012,65(10-12):471-477
The environmental characteristics of Ahe deep lagoon (Tuamotu Archipelago, French Polynesia) were studied over 3 years with the aim of explaining the spatial and temporal variability of the natural food available for pearl oysters with a special focus on phytoplankton biomass and global photosynthesis/respiration ratio of the lagoon. Chlorophyll averaged 0.34±0.01 μg L(-1) and our findings did not confirm increased phytoplankton biomass in deep lagoonal waters. Phytoplankton production appears to be limited firstly by nitrogen and respiratory processes overpass photosynthetic processes at least in the north-eastern edge of the atoll. Grazing by pearl oysters in culture seems to decrease the POC concentration but not the phytoplankton biomass. Oysters graze mainly on non chlorophyllian particles. 相似文献
5.
Review of solutions for 3D hydrodynamic modeling applied to aquaculture in South Pacific atoll lagoons 总被引：1，自引：0，他引：1
Andréfouët S Ouillon S Brinkman R Falter J Douillet P Wolk F Smith R Garen P Martinez E Laurent V Lo C Remoissenet G Scourzic B Gilbert A Deleersnijder E Steinberg C Choukroun S Buestel D 《Marine pollution bulletin》2006,52(10):1138-1155
A workshop organized in French Polynesia in November 2004 allowed reviewing the current methods to model the three-dimensional hydrodynamic circulation in semi-enclosed atoll lagoons for aquaculture applications. Mollusk (e.g. pearl oyster, clam) aquaculture is a major source of income for South Pacific countries such as French Polynesia or Cook Islands. This aquaculture now requires a better understanding of circulation patterns to improve the spatial use of the lagoons, especially to define the best area to set larvae collectors. The pelagic larval duration of the relevant species (<20 days) and the size of the semi-closed lagoons (few hundreds of km2) drive the specifications of the model in terms of the spatial and temporal scale. It is considered that, in contrast with fish, mollusk larvae movements are limited and that their cycle occurs completely in the lagoon, without an oceanic stage. Atolls where aquaculture is productive are generally well-bounded, or semi-closed, without significant large and deep openings to the ocean. Nevertheless part of the lagoon circulation is driven by oceanic water inputs through the rim, ocean swells, tides and winds. Therefore, boundary conditions of the lagoon system are defined by the spatial structure of a very shallow rim (exposition and number of hoas), the deep ocean swell climate, tides and wind regimes. To obtain a realistic 3D numerical model of lagoon circulation with adequate forcing, it is thus necessary to connect in an interdisciplinary way a variety of methods (models, remote sensing and in situ data collection) to accurately represent the different components of the lagoon system and its specific boundary conditions. We review here the current methods and tools used to address these different components for a hypothetical atoll of the Tuamotu Archipelago (French Polynesia), representative of the semi-closed lagoons of the South Pacific Ocean. We hope this paper will serve as a guide for similar studies elsewhere and we provide guidelines in terms of costs for all the different stages involved. 相似文献
6.
We examine the equilibrated and time-evolving adjoint solutions of an ocean general circulation model. Adjoint models calculate the sensitivity of a diagnostic, (here, the strength of the meridional overturning) to all forcing fields in a single integration. The time evolution of the sensitivity patterns demonstrates the validity of the adjoint modeling approach over climatological time scales in coarse-resolution ocean models. Our objective is to identify the principle adjustment mechanisms through which the meridional overturning strength adapts to perturbations in wind and buoyancy forcing. The adjoint approach is shown to be a valuable alternative to traditional perturbation methods in highlighting the processes and time scales important to ocean and climate modeling. 相似文献
7.
The role of oceanic tide, wind stress, freshwater river inflows, and waves in the long-term circulation and residence time
in óbidos Lagoon is investigated using a sensitivity analysis carried out by means of a two-dimensional model. MOHID modeling
system coupled to Steady-State Spectral Wave model for simulate óbidos Lagoon circulation were implemented. For residence
time calculus, a Lagrangian transport model was used. Tidal forcing is shown to be the dominant forcing, although storm waves
must be considered to simulate accurately the long-term circulation. Tidal forcing enhances a spatial distribution in water
residence time. Renewal time scales varies from values of 2 days in the near-ocean areas and 3 weeks in the inner areas. Freshwater
river inflows decrease the residence time, while waves increase. In heavy rain periods, the water residence time decreases
by about 40% in the upper lagoon. When wave forcing is considered, the residence time increases between 10% and 50% depending
on lagoon area. The increase in residence time is explained by the sea level rise within lagoon (~1 m above average lagoon
sea level) during storm wave periods. Average residence time is 16 days for tidal forcing, 9 days when the rivers are included
(wet period), and 18 days when the waves are considered. 相似文献
8.
9.
Bouvy M Combe M Bettarel Y Dupuy C Rochelle-Newall E Charpy L 《Marine pollution bulletin》2012,65(10-12):506-515
This study examined the distribution of virioplankton and bacterioplankton in two coral reef systems (Ahe and Takaroa atolls) in the Tuamotu Archipelago, in comparison with the surrounding oligotrophic ocean. Mean concentrations of 4.8×10(5) and 6.2×10(5)cellsml(-1) for bacteria and 8.1×10(6) and 4.3×10(6)VLP(virus-like particle) ml(-1) were recorded in Ahe and Takaroa lagoons, respectively. Chlorophyll-a concentrations and dissolved organic matter were higher in Ahe whereas (3)H thymidine incorporation rates were higher in Takaroa. First data on lytic and lysogenic strategies of phages in coral reef environments were discussed in this paper. The fraction of visibly infected cells by viruses was negligible regardless of the lagoon station (mean=0.15%). However, the fraction of lysogenic cells ranged between 2.5% and 88.9%. Our results suggest that the distribution patterns of virioplankton are apparently not coupled to the spatial dynamics of the bacterioplankton communities. 相似文献
10.
Schaffelke B Carleton J Skuza M Zagorskis I Furnas MJ 《Marine pollution bulletin》2012,65(4-9):249-260
Coastal and inshore areas of the Great Barrier Reef lagoon receive substantial amounts of material from adjacent developed catchments, which can affect the ecological integrity of coral reefs and other inshore ecosystems. A 5-year water quality monitoring dataset provides a 'base range' of water quality conditions for the inshore GBR lagoon and illustrates the considerable temporal and spatial variability in this system. Typical at many sites were high turbidity levels and elevated chlorophyll a and phosphorus concentrations, especially close to river mouths. Water quality variability was mainly driven by seasonal processes such as river floods and sporadic wind-driven resuspension as well as by regional differences such as land use. Extreme events, such as floods, caused large and sustained increases in water quality variables. Given the highly variable climate in the GBR region, long-term monitoring of marine water quality will be essential to detect future changes due to improved catchment management. 相似文献
11.
Fjord exchange circulation and its response to abrupt changes in forcing is examined by means of an idealized modeling experiment. Puget Sound, a fjord-type estuary in western North America (State of Washington), is the main context for this study. Parameters of the idealized model are representative of the entrance sill at Admiralty Inlet and the Main Basin of Puget Sound. Sensitivity to some of the model parameters relevant to a 3D realistic model is discussed. An idealized tidal forcing with fortnightly modulation drives a qualitatively realistic cycle of exchange circulation while the other boundary conditions are kept fixed in time. The cycle is characterized by fortnightly pulses of deep water intrusions with a sharp front at the leading edge and reversed circulation cells below the sill depth developing between the intrusions. This basic state is then perturbed and response of the circulation to abrupt changes in oceanic salinity and river discharge is examined. 相似文献
12.
Pearl oyster aquaculture is a major activity in French Polynesia atoll lagoons. After the economic decline that characterized the last decade, concerns recently rose about discarded installations and materials that supported aquaculture practices and by facilities abandoned after they had to close their activities. In May 2013, a first inventory of the type and amount of pearl farms derelict gear (PFDG) was achieved on 47 sites in Ahe lagoon. Surveys were conducted within and outside the boundaries of aquaculture concessions. Twenty types of PFDG littered the lagoon floor and the water column. The most impacted areas were near abandoned grafting houses with up to nine types of PFDG. Forty-five percent of the sites were impacted, including outside concessions. While management authorities are fully aware of the problem, this first assessment is a wake-up call to stimulate the cleaning of lagoons, enhance awareness among farmers, and identify potential ecological consequences on lagoon ecosystems. 相似文献
13.
Soheila Taebi Ryan J. Lowe Charitha B. Pattiaratchi Greg N. Ivey Graham Symonds 《Ocean Dynamics》2012,62(4):585-602
The circulation driven by wave breaking, tides and winds within a fringing coral reef system (Ningaloo Reef) in Western Australia
was investigated using the ocean circulation model ROMS two-way coupled to the wave model SWAN. Currents within the system
were dominantly forced by wave breaking, with flow driven over the shallow reefs and towards the lagoon, which returned to
the ocean through channels in the reef. Hindcast model simulations were compared against an extensive field dataset, revealing
that the coupled wave–circulation model could accurately predict the waves and currents throughout this morphologically complex
reef–lagoon system. A detailed momentum budget analysis showed that, over the reef, a dominant cross-shore balance was established
between radiation stress gradients and a pressure (mean water level) gradient (similar to a beach). Within the lagoon, alongshore
currents were primarily balanced by alongshore gradients in wave setup, which drove flow towards (and ultimately out) the
channels. The importance of these wave-driven currents to Ningaloo Reef was quantified over a full seasonal cycle, during
periods when wave and wind conditions significantly differed. These results showed that wave breaking still overwhelmingly
dominated the circulation and flushing of Ningaloo Reef throughout the year, with winds playing an insignificant role. 相似文献
14.
This paper discusses the variability of surface currents around Sekisei Lagoon using a nested grid ocean circulation model.
We developed a triple-nested grid system that consists of a coarse-resolution (1/60° or ∼1.85 km) model off Taiwan, an intermediate-resolution
(1/300° or ∼370 m) model around the Yaeyama Islands, and a fine-resolution (1/900° or ∼123 m) model of Sekisei Lagoon. The
nested grid system was forced by wind and heat flux calculated from six-hourly atmospheric reanalysis data and integrated
over the period from May to July 2003. The coarse-resolution model was driven by lateral boundary conditions calculated from
daily ocean reanalysis data to include realistic variation of the Kuroshio and mesoscale eddies with spatial scales of ∼500–700 km
in the open ocean. The tidal forcing was included in the intermediate-resolution model by interpolating sea level data obtained
from a data-assimilative tidal model. The results were then used to drive the fine-resolution model to simulate the surface
water circulation around Sekisei lagoon. Model results show that (1) currents inside the lagoon are mainly driven by tide
and wind; (2) there exists a strong southwestward current along the bottom slope in the southeast portion of the lagoon; the
current is mainly driven by remote mesoscale eddies and at times intensified by the local wind; (3) the flow relaxation scheme
is effective in reducing biases along the open boundaries. The simulated currents were used to examine the retention and dispersion
of passive particles in the surface layer. Results show that the surface dispersion in the strong open ocean current region
is significantly higher than that inside the lagoon. 相似文献
15.
Ningaloo Reef, located along the northwest coast of Australia, is one of the longest fringing coral reefs in the world extending ~300 km. Similar to other fringing reefs, it consists of a barrier reef ~1–6 km offshore with occasional gaps, backed by a shallow lagoon. Wave breaking on the reef generates radiation stress gradients that produces wave setup across the reef and lagoon and mean currents across the reef. A section of Ningaloo Reef at Sandy Bay was chosen as the focus of an intense 6-week field experiment and numerical simulation using the wave model SWAN coupled to the three-dimensional circulation model ROMS. The physics of nearshore processes such as wave breaking, wave setup and mean flow across the reef was investigated in detail by examining the various momentum balances established in the system. The magnitude of the terms and the distance of their peaks from reef edge in the momentum balance were sensitive to the changes in mean sea level, e.g. the wave forces decreased as the mean water depth increased (and hence, wave breaking dissipation was reduced). This led to an increase in the wave power at the shoreline, a slight shift of the surf zone to the lee side of the reef and changes in the intensity of the circulation. The predicted hydrodynamic fields were input into a Lagrangian particle tracking model to estimate the transport time scale of the reef-lagoon system. Flushing time of the lagoon with the open ocean was computed using two definitions in renewal of semi-enclosed water basins and revealed the sensitivity of such a transport time scale to methods. An increase in the lagoon exchange rate at smaller mean sea-level rise and the decrease at higher mean sea-level rise was predicted through flushing time computed using both methods. 相似文献
16.
Analysis on observing optimization for the wind-driven circulation by an adjoint approach 总被引：1，自引：0，他引：1
The adjoint approach is a variational method which is often applied to data assimilation widely in meteorology and oceanography. It is used for analyses on observing optimization for the wind-driven Sverdrup circulation. The adjoint system developed by Thacker and Long (1992), which is based on the GFDL Byran-Cox model, includes three components, i. e. the forward model, the adjoint model and the optimal algorithm. The GFDL Byran-Cox model was integrated for a long time driven by a batch of ideal wind stresses whose meridional component is set to null and zonal component is a sine function of latitudes in a rectangle box with six vertical levels and 2 by 2 degree horizontal resolution. The results are regarded as a "real" representative of the wind-driven Sverdrup circulation, from which the four dimensional fields are allowed to be sampled in several ways, such as sampling at the different levels or along the different vertical sections. To set the different samples, the fields of temperature, salinity and velocities function as the observational limit in the adjoint system respectively where the same initial condition is chosen for 4D VAR data assimilation. By examining the distance functions which measure the misfit between the circulation field from the control experiment of the adjoint system with a complete observation and those from data assimilation of adjoint approach in these sensitivity experiments respectively, observing optimizations for the wind-driven Sverdrup circulation will be suggested under a fixed observational cost. 相似文献
17.
Atoll lagoons display a high diversity of trophic states due mainly to their specific geomorphology, and probably to their level and mode of human exploitation. We investigated the functioning of the Ahe atoll lagoon, utilized for pearl oyster farming, through estimations of photosynthetic parameters (pulse amplitude modulation fluorometry) and primary production ((13)C incorporation) measurements of the size structured phytoplankton biomass (<2μm and >2μm). Spatial and temporal scales of variability were surveyed during four seasons, over 16months, at four sites within the lagoon. While primary production (P) was dominated by the picophytoplankton, its biomass specific primary productivity (P(B)) was lower than in other atoll lagoons. The variables size fraction of the phytoplankton, water temperature, season, the interaction term station*fraction and site, explained significantly the variance of the data set using redundancy analysis. No significant trends over depth were observed in the range of 0-20m. A clear spatial pattern was found which was persistent over the seasons: south and north sites were different from the two central stations for most of the measured variables. This pattern could possibly be explained by the existence of water cells showing different water residence time within the lagoon. Photoacclimation strategies of the two size fractions differed through their light saturation coefficient (higher for picophytoplankton), but not through their maximum photosynthetic capacity (ETR(max)). Positive linear relationships between photosynthetic parameters indicated that their dynamic was independent of light availability in this ecosystem, but most probably dependent on nutrient availability and/or rapid changes in the community structure. Spatial and temporal patterns of the measured processes are then further discussed in the context of nutrient availability and the possible role of cultured oysters in nutrient recycling. 相似文献
18.
Adolfo Contreras Ruiz Esparza Pascal Douillet Jorge Zavala-Hidalgo 《Ocean Dynamics》2014,64(9):1349-1371
The tidal circulation patterns in the Terminos Lagoon were studied based on the analysis of 1 year of measurements and numerical simulations using a baroclinic 3D hydrodynamic model, the MARS3D. A gauging network was installed consisting of six self-recording pressure–temperature sensors, a tide gauge station and two current profilers, with pressure and temperature sensors moored in the main lagoon inlets. Model simulations were validated against current and sea level observations and were used to analyse the circulation patterns caused by the tidal forcing. The numerical model was forced with eight harmonic components, four diurnal (K 1, O 1, P 1, Q 1) and four semi-diurnal (M 2, S 2, N 2, K 2), extracted from the TPX0.7 database. The tidal patterns in the study area vary from mixed, mainly diurnal in the two main inlets of the lagoon, to diurnal in its interior. The tidal residual circulation inside the lagoon is dominated by a cyclonic gyre. The results indicate a net flux from the southwest Ciudad del Carmen inlet (CdC) towards the northeast Puerto Real inlet (PtR) along the southern side of the lagoon and the opposite in the northern side. The results indicate two areas of strong currents in the vicinity of the inlets and weak currents inside the lagoon. The area of strong currents in the vicinity of the CdC inlet is larger than that observed in the PtR inlet. Nevertheless, the current analysis indicates that the highest current speeds, which can reach a magnitude of 1.9 m s?1, occurred in PtR. A further analysis of the tide distortion in the inlets revealed that both passages are ebb dominated. 相似文献
19.
A numerical model of the Atlantic Ocean was used to study the low-frequency variability of meridional transports in the North Atlantic. The model shows a behaviour similar to those used in previous studies, and the temporal variability of certain variables compares favourably to observed time series. By changing the depth and width of the sills between the subpolar North Atlantic and the Nordic Seas, the mean horizontal and overturning circulation as well as some water mass properties are modified significantly. The reaction of meridional oceanic transports to atmospheric forcing fluctuations remains, however, unchanged. The critical role of the surface heat flux retroaction term for the meridional heat transport in stand-alone ocean models is discussed. The experiments underline the role of atmospheric variability for fluctuations of the large-scale ocean circulation on time scales from years to decades, and they support the hypothesis that the mean overturning strength is controlled by the model representation of the density of the overflow water masses.Responsible Editor: Dirk Olbers 相似文献
20.
To simulate the dynamic interaction between a saline lagoon and a ground water system, a numerical model for two-dimensional, variable-density, saturated-unsaturated, and coupled flow and solute transport (saltwater intrusion by finite elements and characteristics [SIFEC]) was modified to allow the volume of water and mass of salt in the lagoon to vary with each time step. The modified SIFEC allows the stage of a lagoon to vary in accordance with a functional relation between the stage and water volume of the lagoon, and also allows the salt concentration of the lagoon to vary in accordance with the salt budget of the lagoon including chemical precipitation and dissolution of salt. The updated stage and salt concentration of the lagoon are in turn used as transient boundary conditions for the coupled flow and solute transport model. The utility of the modified model was demonstrated by applying it to the eastern Mediterranean coastal region of Turkey for assessing impacts of climate change on the subsurface environment under scenarios of sea level rise, increased evaporation, and decreased precipitation. 相似文献