Characterization of bacterial community structure in vestimentiferan tubeworm Ridgeia piscesae trophosomes   总被引：1，自引：0，他引：1  

Leslie S.-L. Chao  Richard E. Davis  & Craig L. Moyer 《Marine Ecology》2007,28(1):72-85

Terminal‐restriction fragment length polymorphisms (T‐RFLPs) were used to address the question whether there are multiple phylotypes of bacteria within the trophosome of the vestimentiferan tubeworm Ridgeia piscesae in addition to the known endosymbiont. Clone libraries were constructed to aid in the identification of the additional bacterial phylotypes. Individual R. piscesae specimens were collected from Juan de Fuca Ridge, Axial Caldera and Explorer Ridge, Magic Mountain. Clone library analyses revealed only one bacterial phylotype (expected R. piscesae endosymbiont) within the Explorer Ridge trophosomes. However, the Axial Caldera clone library revealed five operational taxonomic units (OTUs). Three of the resulting phylotypes detected (designated RAE) were putative thioautotrophic symbionts within the γ‐Proteobacteria which belonged to the anticipated endosymbiont group (RAE OTU 1), the Maorithyas hadalis symbiont II group (RAE OTU 3), and the Halothiobacillus group (RAE OTU 4). The remaining two phylotypes were most likely opportunistically derived. RAE OTU 5 was an α‐Proteobacterium within the Roseobacter group and RAE OTU 2 was within the Cytophaga–Flavobacterium–Bacteroidetes. T‐RFLP analyses revealed that all 15 trophosomes evaluated contained at least RAE OTUs 1 and 4. Five of the 15 trophosomes contained at least RAE OTUs 1, 3, and 4 and two of the trophosomes contained at least five RAE OTUs. Cluster analysis of the T‐RFLP data revealed three distinct clusters. The number of taxa within the trophosome may be an indication of the general health of the tubeworm. This study strongly suggests that we have discovered and identified more than one bacterial phylotype within the trophosome of vestimentiferan R. piscesae.  相似文献   

Importance of spawning location and timing to successful transport to nursery areas: a simulation study of Gulf of Alaska walleye pollock   总被引：2，自引：0，他引：2  

Hinckley  Sarah; Hermann  Albert J.; Mier  Kathy L.; Megrey  Bernard A. 《ICES Journal of Marine Science》2001,58(5):1042-1052

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Rapid visualization of plankton abundance and taxonomic composition using the Video Plankton Recorder     

Cabell S. Davis  Scott M. Gallager  Martin Marra  W. Kenneth Stewart 《Deep Sea Research Part II: Topical Studies in Oceanography》1996,43(7-8)

Traditional methods for determining spatial distributions of planktonic taxa involve net, pump, and bottle collections followed by the tedious and time-consuming task of plankton sample analysis. Thus, plankton ecologists often require months or even years to process samples from a single study. In this paper, we present a method that allows rapid visualization of the distribution of planktonic taxa while at sea. Rapid characterization of plankton distributions is essential in the dynamic physical environment, where biological and physical patterns can change quickly. Such a “sample-and-observe” capability is necessary for mapping ephemeral features (such as patches, eddies, jets, plumes) and determining appropriate locations to conduct more localized sampling, including in situ observational studies. We describe the techniques used in imaging the plankton, analyzing the video, and visualizing the data. We present an example of at-sea data analysis conducted aboard R.V. Columbus Iselin on Georges Bank in May 1994 and visualizations of the 3-dimensional distribution of selected planktonic taxa in a 2 × 2 km × 90 m volume of seawater. A video of the image processing and visualization is included on the CD-ROM accompanying this volume and is an essential part of this paper.  相似文献   

Post-Miocene stratigraphy and depositional environments of valley-fill sequences at the mouth of Tampa Bay, Florida     

Thomas W. Ferguson  Richard A. Davis  Jr.   《Marine Geology》2003,200(1-4):157-170

Post-Miocene sea-level low stands allowed rivers and karst processes to incise the exposed carbonate platform along the Gulf Coast of Florida. Few Miocene to mid-Pleistocene deposits survived erosion along the present coast except within incised valleys. Since their formation, these valleys have been filled and incised multiple times in response to sea-level changes. The thick sedimentary sequences underlying the mouth of Tampa Bay have been recorded as a range of depositional environments and multiple sea-level incursions and excursions during pre-Holocene time and subsequent to the accumulation of the Miocene carbonate sequences. Sediment analysis of cores collected from a north–south transect across the mouth of Tampa Bay has enabled the identification of lithofacies, ranging from well-sorted, quartz sand to dense, fossiliferous, phosphatic grainstone. These facies were deposited in freshwater, estuarine, and shallow, open marine environments. As a result of channel development and migration within the paleovalley, and cut-and-fill associated with individual transgressions and regressions, correlation of the lithofacies does not extend across the entire transect. Fining-upward sequences truncated by tidal ravinement surfaces that extend throughout the paleovalley can, however, be identified. Age determinations based on 14-C analysis, amino-acid racemization, and strontium isotope analysis dating of numerous samples yield ages of Miocene, Pliocene, early Pleistocene, and late Pleistocene, as well as Holocene for sequences that accumulated and were preserved in this valley-fill complex. Numerous inconsistencies in the stratigraphic organization of the age determinations indicate that there are bad dates, considerable reworking of shells that were dated, or both. For this reason as well as the lack of detailed correlation among the three relatively complete cores, it is not possible to place these strata in a sequence stratigraphic framework.  相似文献   

Formation of ‘Beach Rock’ at Siesta Key, Florida and its influence on barrier island development     

Darren Spurgeon  Richard A. Davis  Jr.  Eugene A. Shinnu 《Marine Geology》2003,200(1-4):19-29

Seaward-dipping strata of carbonate-cemented shell debris located along the coast of Siesta Key on the Gulf Coast of the Florida peninsula have long been interpreted to be beachrock equivalent in age to the Pleistocene Anastasia Formation (Stage 5e) of the east coast of Florida. Detailed examination of thin sections along with radiometric dating and isotopic analyses demonstrates clearly that this is a Holocene deposit that is not beachrock but was lithified in a meteoric environment. Whole rock dates, dates from shells only, and from cement only demonstrate that these beach deposits were in place by at least 1800 yr BP and might have been there as long ago as 4300 yr BP. This means that some type of barrier island was in place at that time. Previous investigations have depicted Siesta Key as having a maximum age of 3000 yr with these deposits being located about 2 km landward of the beach deposits. This suggests that the beach deposits might have been the site of the original position of Siesta Key. These data also indicate that sea level must have been near its present position at the time that these foreshore beach deposits were deposited; sometime between 1800 and 4300 yr ago. This scenario indicates that sea level along this coastal reach probably reached its present level at least about 2000 yr ago.  相似文献   

Genetic Relationships Among One Non-Endemic and Two Endemic Mediterranean Triplefin Blennies (Pisces, Blennioidei)   总被引：1，自引：0，他引：1  

Gerard J. Geertjes  Albert Kamping  Wilke van Delden  & John J. Videler 《Marine Ecology》2001,22(3):255-265

Abstract. Three triplefin blennies occur sympatrically in the Mediterranean Sea; Tripterygion tripteronotus and T. melanurus are endemic, whereas T. delaisi is also found in the Eastern Atlantic. Although very similar in morphology, ecology and behaviour, some striking differences exist among reproductive strategies. Several authors proposed hypotheses on the evolution of these species. In order to enhance insight into the genetic structure of this genus, an enzyme electrophoretic survey was performed. Samples of 40 to 45 specimens of each species were collected near Calvi (Corsica, France). Twenty-four enzyme loci were analysed, of which 17 appeared polymorphic. T. delaisi showed a high level of average observed heterozygosity (H_o) of 0.140, as opposed to very low levels of 0.009 and 0.021 in T. tripteronotus and T. melanurus , respectively. Nei's genetic distance was 0.21 between T. delaisi and T. tripteronotus , 0.35 between T. delaisi and T. melanurus and 0.45 between T. tripteronotus and T. melanurus . We hypothesise that divergence of these species started before the Pleistocene and that the endemic species survived the Pleistocene glaciations in refugia within the Mediterranean. The possibility that T. tripteronotus and T. delaisi diverged through sympatric speciation is discussed.  相似文献   

Contemporary ocean and coastal management issues in Australia and New Zealand: an overview     

Bruce W. Davis 《Ocean & Coastal Management》1996,33(1-3)

The past decade has witnessed an unprecedented increase in the number of international treaties, conventions and agreements dealing with maritime issues and oceans governance. Most nations are attempting to cope with this expanding agenda at a time of fiscal constraint, competing environmental demands and the emergence of a new global strategic, political and economic order. However, similar issues do not always lead to similar outcomes. Australia and New Zealand share some common oceanic and coastal management problems, but variations in response arise from geographical differences, constitutional provisions, political style and administrative arrangements. This paper provides a brief overview of contemporary maritime issues and attempted solutions in both nations.  相似文献   

The autonomous underwater glider "Spray"   总被引：4，自引：0，他引：4  

Sherman  J. Davis  R.E. Owens  W.B. Valdes  J. 《Oceanic Engineering, IEEE Journal of》2001,26(4):437-446

A small (50-kg, 2-m long) underwater vehicle with operating speeds of 20-30 cm/s and ranges up to 6000 km has been developed and field tested. The vehicle is essentially an autonomous profiling float that uses a buoyancy engine to cycle vertically and wings to glide horizontally while moving up and down. Operational control and data relay is provided by GPS navigation and two-way communication through ORBCOMM low-Earth-orbit satellites. Missions are envisioned with profile measurements repeated at a station or spaced along a transect. The initial instrument complement of temperature, conductivity, and pressure sensors was used to observe internal waves and tides in the Monterey underwater canyon  相似文献   

Microzooplankton production in the oceans   总被引：7，自引：0，他引：7  

Landry  Michael R.; Calbet  Albert 《ICES Journal of Marine Science》2004,61(4):501-507

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Factors affecting spatial and temporal variability in material exchange between the Southern Everglades wetlands and Florida Bay (USA)     

Martha A. Sutula  Brian C. Perez  Enrique Reyes  Daniel L. Childers  Steve Davis  John W. Day  Jr.  David Rudnick  Fred Sklar 《Estuarine, Coastal and Shelf Science》2003,57(5-6):757-781

Physical and biological processes controlling spatial and temporal variations in material concentration and exchange between the Southern Everglades wetlands and Florida Bay were studied for 2.5 years in three of the five major creek systems draining the watershed. Daily total nitrogen (TN), and total phosphorus (TP) fluxes were measured for 2 years in Taylor River, and ten 10-day intensive studies were conducted in this creek to estimate the seasonal flux of dissolved inorganic nitrogen (N), phosphorus (P), total organic carbon (TOC), and suspended matter. Four 10-day studies were conducted simultaneously in Taylor, McCormick, and Trout Creeks to study the spatial variation in concentration and flux. The annual fluxes of TOC, TN, and TP from the Southern Everglades were estimated from regression equations. The Southern Everglades watershed, a 460-km² area that includes Taylor Slough and the area south of the C-111 canal, exported 7.1 g C m⁻², 0.46 g N m⁻², and 0.007 g P m⁻², annually. Everglades P flux is three to four orders of magnitude lower than published flux estimates from wetlands influenced by terrigenous sedimentary inputs. These low P flux values reflect both the inherently low P content of Everglades surface water and the efficiency of Everglades carbonate sediments and biota in conserving and recycling this limiting nutrient. The seasonal variation of freshwater input to the watershed was responsible for major temporal variations in N, P, and C export to Florida Bay; approximately 99% of the export occurred during the rainy season. Wind-driven forcing was most important during the later stages of the dry season when low freshwater head coincided with southerly winds, resulting in a net import of water and materials into the wetlands. We also observed an east to west decrease in TN:TP ratio from 212:1 to 127:1. Major spatial gradients in N:P ratios and nutrient concentration and flux among the creek were consistent with the westward decrease in surface water runoff from the P-limited Everglades and increased advection of relatively P-rich Gulf of Mexico (GOM) waters into Florida Bay. Comparison of measured nutrient flux from Everglades surface water inputs from this study with published estimates of other sources of nutrients to Florida Bay (i.e. atmospheric deposition, anthropogenic inputs from the Florida Keys, advection from the GOM) show that Everglades runoff represents only 2% of N inputs and 0.5% of P input to Florida Bay.  相似文献