High connectivity and directional gene flow in European Atlantic and Mediterranean populations of Ciona intestinalis sp. A          下载免费PDF全文

Ornella Affinito  Nikos Andreakis  Luigi Caputi  Rita Marino  Raimondo Pannone  Paolo Sordino  Gabriele Procaccini 《Marine Ecology》2015,36(4):1230-1243

Understanding the factors that cause population divergence has long been of interest to marine biologists in their attempts to interpret the effect of human‐mediated vectors. Broadcast‐spawning species with limited dispersal capability are excellent candidates to measure the present‐day patterns of genetic diversity. The tunicate Ciona intestinalis (Ascidiacea) is comprised of a complex of morphologically cryptic species that form vigorous aggregates in eutrophic habitats (harbors, gulfs and lagoons) where they can compete with the epibenthic community and cause biofouling problems. This study investigated biogeographic variability and migration patterns of C. intestinalis sp. A along Northeast Atlantic and Mediterranean coasts using microsatellite markers. Data presented here on 371 specimens collected from 17 populations reveal high genetic polymorphism, but with a deficit of heterozygote deficiency. Absence of evidence for isolation by distance suggests that the genetic patterns do not reflect the geographic distribution of sampled populations. Substantial gene flow and artificial potential for dispersal boost high levels of within‐population genetic variability and prevent genetic differentiation within and between seas. A predominant eastward migration pattern was revealed by the data set, with very limited opportunity for C. intestinalis sp. A to travel westward. This directional movement indicates that other properties (e.g. habitat quality, genetic traits, mating system, life cycle) may cause adaptive divergence at a large biogeographic scale.  相似文献   

Macrobenthos relative to the oxygen minimum zone on the East Indian margin,Bay of Bengal          下载免费PDF全文

Akkur V. Raman  Rayaroth Damodaran  Lisa A. Levin  Thiruchitrambalam Ganesh  Yannamani K. V. Rao  Sateesh Nanduri  Rakhesh Madhusoodhanan 《Marine Ecology》2015,36(3):679-700

The Bay of Bengal remains one of the least studied of the world's oxygen minimum zones (OMZs). Here we offer a detailed investigation of the macrobenthos relative to oxygen minimum zone [OMZ – DO (dissolved oxygen), concentration <0.5 ml·1^?1] at 110 stations off the North East Indian margin (16⁰ and 20⁰ N) featuring coastal, shelf and slope settings (10–1004 m). Macrobenthos (>0.5 mm) composition, abundance and diversity were studied in relation to variations in depth, dissolved oxygen, sediment texture and organic carbon. Using multivariate procedures powered by SIMPROF analysis we identified distinct OMZ core sites (depth 150–280 m; DO 0.37 ml·1^?1) that exhibited dense populations of surface‐feeding polychaetes (mean 2188 ind. m^?2) represented by spionids and cossurids (96%). Molluscs and crustaceans were poorly represented except for ampeliscid amphipods. The lower OMZ sites (DO > 0.55 ml·l^?1) supported a different assemblage of polychaetes (cirratulids, amphinomids, eunicids, orbinids, paraonids), crustaceans and molluscs, albeit with low population densities (mean 343 ind. m^?2). Species richness [E(S₁₀₀)], diversity (Margalef d; H’) and evenness (J’) were lower and dominance was higher within the OMZ core region. Multiple regression analysis showed that a combination of sand, clay, organic carbon, and dissolved oxygen explained 62–78% of the observed variance in macrobenthos species richness and diversity: E(S₁₀₀) and H’. For polychaetes, clay and oxygen proved important. At low oxygen sites (DO <1 ml·l^?1), depth accounted for most variance. Residual analysis (after removing depth effects) revealed that dissolved oxygen and sediment organic matter influenced 50–62% of residual variation in E(S₁₀₀), H’ and d for total macrofauna. Of this, oxygen alone influenced up to ~50–62%. When only polychaetes were evaluated, oxygen and organic matter explained up to 58–63%. For low oxygen sites, organic matter alone had the explanatory power when dominance among polychaetes was considered. Overall, macrobenthic patterns in the Bay of Bengal were consistent with those reported for other upwelling margins. However, the compression of faunal gradients at shallower depths was most similar to the Chile/Peru margin, and different from the Arabian Sea, where the depth range of the OMZ is two times greater. The Bay of Bengal patterns may take on added significance as OMZs shoal globally.  相似文献   

青岛潮间带沉积物可培养厌氧细菌多样性的研究   总被引：1，自引：1，他引：0  

王雅苹  史晓翀  于少兰  张晓华 《海洋科学》2015,39(3):92-99

为了验证设计的简易厌氧培养方法,作者以青岛潮间带沉积物为研究对象,采用5种培养基,从青岛潮间带沉积物共分离获得138株厌氧细菌。16S r DNA序列分析表明,这些细菌分属3个门15个属32个种,其中γ-变形菌纲64株18个种,在种类上处于优势地位;此外还包括δ-变形菌纲(δ-Proteobacteria)16株2个种,ε-变形菌纲4株1个种,拟杆菌门(Bacteroidetes)29株8个种,梭杆菌门(Fusobacteria)25株3个种。在属水平上,弧菌属(Vibrio)、Marinifilum属、泥杆菌属(Ilyobacter)、脱硫弧菌属(Desulfovibrio)、希瓦氏菌属(Shewanella)在数量上占优势。此外,有26株8种细菌(占总菌株数的18.84%)与已知菌的同源性介于89.38%~94.22%,为潜在的海洋细菌新科或新属,表明此简易厌氧菌培养方法在获得新菌方面具有较大优势。另外,研究结果还表明,不同培养基对特定的类群具有选择性:2216E培养基对γ-变形菌纲分离培养效率较高;SPG培养基在获得新菌方面具有优势(占新菌数62.5%),且这些新菌大多属于拟杆菌门和梭杆菌门,其中SPG-1培养基对于分离硫酸盐还原菌和难培养的ε-变形菌纲细菌具有优势,SPG-4培养基对分离硝酸盐还原菌具有优势。  相似文献   

基于线粒体COI基因序列的4个海域口虾蛄群体的遗传多样性研究     

董鑫  邢坤  隋宥珍  刘海映 《海洋科学》2015,39(7):29-36

为比较中国不同海域口虾蛄(Oratosqilla oratoria)群体的遗传特性, 作者对采自皮口、绥中、青岛和广州4 个海域的口虾蛄群体的线粒体COI基因序列进行扩增和测序, 比较并分析了其遗传多样性和系统进化关系。获得585bp 的口虾蛄线粒体COI基因序列, 发现变异位点54 个, 占总位点数的9.2%。COI基因序列A+T 含量(64.8%)显著高于G+T 含量(35.2%), 符合节肢动物线粒体DNA 碱基组成的特点。转换与颠换的平均比值是7.84, 碱基替换未达到饱和。100 个样本的线粒体COI基因序列共定义35 个单倍型, 单倍型多样性(Hd)为0.9162, 平均核苷酸多样性(π)为0.0203。4 个群体均具有高的单倍型多样性和低的核苷酸多样性的特点, 说明4 个海域口虾蛄的遗传多样性均处于中等水平, 但广州海域的遗传多样性水平最高。AMOVA 分析表明, 来自于群体间的遗传差异(84.53%)明显高于来自群体内的差异(15.47%)。遗传分化系数(F_st)表明皮口、绥中、青岛3 个海域间几乎没有发生分化(F_st<0), 而广州海域口虾蛄遗传分化较大。从GenBank 上下载了19 条粤东海域口虾蛄的同源序列与本实验获得序列共同构建NJ 系统发育树, 结果显示皮口、绥中、青岛聚为一支, 广州和粤东(深圳和汕尾)聚为另一支。单倍型系统发育树和单倍型进化网络关系图均显示出广州海域口虾蛄群体较大的遗传分化。  相似文献   

江西北部岩溶地貌陆生贝类物种多样性     

谢广龙  姜娇  吴小平  欧阳珊 《海洋科学》2015,39(11):126-131

作者于2013年5月至6月调查了位于江西北部地区岩溶地貌陆生贝类资源,共采得陆生贝类63种及亚种(含5个未定种),分别隶属于12科21属,其中1个新种,即石钟山弯螺(Sinoennea shizhongshanensis sp.nov),优势种为雪土鸥螺(Georissa niva)、细纹喇叭螺(Boysidia gracilis)、囊喇叭螺(Boysidia dorsata)和灰尖巴蜗牛(Bradybaena ravida ravida)。区系成分以东洋界成分为主,占总种类数的61.90%。计算了江西北部地区岩溶地貌陆生贝类多样性指数,其中Margalef丰富度指数(dMA)为2.205~4.273,Shannon-Wiener多样性指数(H′)为1.960~3.374,Pielou均匀度指数(Jsw)为0.448~0.681。与邻近自然保护区比较,江西北部地区岩溶地貌陆生贝类较为丰富,与其他自然保护区物种相似性较低。  相似文献   

我国沿海马尾藻属(Sargassum)的物种多样性及其区系分布特征   总被引：1，自引：1，他引：0  

黄冰心  丁兰平  谭华强  孙国栋 《海洋与湖沼》2013,44(1):69-76

通过对我国沿海多次野外实地考查以及文献报道,采用统计学的分析方法,研究了马尾藻属海藻资源的物种构成和区系分布特征.结果表明,马尾藻属种数在我国海域的水平分布呈现出北少南多的趋势,黄、东海仅17种,南海达到124种、占世界马尾藻总数的36.47％.其中,黄海西区、东海西区、南海北区和南海南区种数及小区单一分布种类数分别为10、13、82和61种及2、3、52和42种.我国特有种类为64种、占世界尾藻总数的18.82％.在我国沿海马尾藻的垂直分布特征为:高潮带2种,低潮带91种,潮下带78种.  相似文献   

南海海域红斑后海螯虾(Metanephrops thomsoni)的分子识别与群体遗传分化     

范艳波  王中铎  郭昱嵩  颜云榕  刘楚吾 《海洋与湖沼》2013,44(1):220-225

利用16S rRNA基因序列分子识别红斑后海螯虾,然后对海南附近海域(18°30′-19°00′N,111 °30′-112°30′ E)、北部湾口海域(15°41′ N,110°40′ E)和南沙群岛海域(5°20′-5°29′N,110°09′-111°26′E)三个地理群体进行ITS1的扩增测序.16S rRNA基因序列的结果表明所取样本准确;三个地理群体分别得到616-623bp、619bp和614bp的ITS1全长序列,A、G、T、C含量平均分别为22.3％、29.4％、17.8％和30.6％;其中562个保守位点,39个多态位点.ML和NJ聚类分析显示三个地理群体共聚为三个大支,其中海南群体有群体分化.表明红斑后海螯虾三个地理群体分化极其显著,且海南群体具有相对高的遗传多样性.  相似文献   

Benthic meiofauna community composition at polluted and non-polluted sites in New Zealand intertidal environments   总被引：1，自引：0，他引：1  

Hack LA  Tremblay LA  Wratten SD  Lister A  Keesing V 《Marine pollution bulletin》2007,54(11):1801-1812

Meiofauna composition was investigated for six field sites, including polluted and non-polluted sites, within two regions (Auckland and Bay of Plenty) during winter (July-August 2004) in the North Island of New Zealand. Physico-chemical parameters were measured during the sampling period and meiofauna distribution and abundance were compared with these measured parameters. Analysis of meiofauna abundance indicated that foraminiferans, nematodes and ostracods were the taxa that contributed to the variability between field sites within the Auckland region. However, no clear taxa dominance was seen in the Bay of Plenty region. Comparison of meiofauna abundance and physico-chemical parameters was done using multivariate analysis (PRIMER). However, no clear relationships between the parameters were observed in any field site in either region. The Shannon-Weiner index of diversity did not show any clear differentiation between polluted and non-polluted field sites. Therefore, from the present study, the taxa or physico-chemical parameters used could not effectively characterise pollution at the investigated field sites.  相似文献   

2021年秦皇岛近岸典型海域浮游植物群落结构的时空变化特征     

马新  徐金涛  杨雯  李微微  谭法启  王众  李欣阳 《海洋与湖沼》2022,53(6):1415-1429

为了解秦皇岛近岸典型海域浮游植物的群落特征及其影响因素,基于2021年4~10月在秦皇岛金梦海湾、东山浴场两个典型海域7个航次的逐月调查结果,对该海域网采浮游植物种类组成、优势种、丰度、多样性等特征及其与环境因子的关系进行了研究,并对两个典型海域海水水质和浮游植物群落之间的差异进行了比较。结果表明:研究海域共检出浮游植物3门45属92种(包含变种和变型),其中硅藻门(Bacillariophyta)32属67种,甲藻门(Pyrrophyta) 12属24种,金藻门(Chrysophyta)1属1种,硅藻门占绝对优势。全年优势种共26种,其中硅藻20种,甲藻6种,且多出现在4~7月,未出现7个月份共有的优势种。浮游植物丰度在8月达到全年最高值,为1.01×10⁸ cells/m³,其余月份浮游植物丰度均在10⁶ cells/m³量级。聚类分析表明,研究海域浮游植物群落有明显的季节更替现象。生物与环境(BIOENV)相关分析表明,水温和盐度是影响研究海域浮游植物群落结构的主要环境因子。两个典型海域浮游植物种类组成差别不大,但金梦海湾海域的营养盐环境和水动力条件更适合甲藻生长。  相似文献   

Genetic variation of the small yellow croaker (Larimichthys polyactis) inferred from mitochondrial DNA provides novel insight into the fluctuation of resources     

Jian Zheng  Tianxiang Gao  Yunrong Yan  Na Song 《海洋学报(英文版)》2022,41(11):88-95

The small yellow croaker (Larimichthys polyactis) belongs to the family Sciaenidae, which is an offshore warm fish species and widely distributed in the western Pacific. In this study, the variation of genetic diversity and genetic differentiation among L. polyactis populations was analyzed by mitochondrial DNA control region. A total of 110 polymorphic sites were checked, which defined 134 haplotypes. High level of haplotype diversity (h=0.993±0.002) was detected in the examined range. Population genetic structure analyse (analysis of molecular variance, F_st) showed there were high gene flow among L. polyactis populations. The result showed that there were relatively high genetic diversity and low genetic differentiation among the Yellow Sea and the East China Sea populations, which can be attributed to diverse habitats, wide distribution range and high mutation rate of control region. Using phylogenetic methods, coalescent analyses (neutrality tests, mismatch distribution analysis, Bayesian skyline analyses) and molecular dating interpreted in conjunction with paleoclimatic and physiographic evidence, we inferred that the genetic make-up of extant populations of L. polyactis was shaped by Pleistocene environmental impacts on the historical demography of this species. Besides, relatively constant genetic diversity and larger effective population size were detected in recent L. polyactis population. The result showed that the fishing policy certainly, such as the summer closed fishing, played a role in protecting resources of L. polyactis. This study can offer a wealth of biological novelties which indicates genetic structure of L. polyactis population and provides the foundation for resources protection and policy setting.  相似文献