最小弧菌热不稳定型溶血素基因克隆与序列分析     

李涛  吴后波 《台湾海峡》2006,25(3):324-329

根据已发表的最小弧菌热不稳定型溶血素（heat-labile hemolysin）基因核苷酸序列，设计和合成一对特异性引物，以最小弧菌96-6-3的基因组DNA为模板，PCR扩增得到热不稳定型溶血素基因片段，克隆到质粒载体pMD-18T中进行测序和分析．其结果表明扩增的热不稳定型溶血素基因片段与已发表的最小弧菌热不稳定型溶血素的同源性高达98％，扩增片段编码由446个氨基酸组成的多肽，推测分子量为50200．软件分析表明编码的氨基酸有较高的抗原性，可作为基因工程疫苗的候选基因片段．  相似文献   

养殖石鲽鱼病原菌鸭瘟巴斯德氏菌(Pasteurella anatipestifer)初步研究   总被引：1，自引：0，他引：1  

常建波  宫向红  孙逢贤  王育红  陈静  李玉珍  刘丽娟  王秉和 《海洋湖沼通报》2002,(1):57-61

1998年7月从寻山水产集团公司养鱼场养殖的石鲽鱼病鱼肠道中分离到多株细菌，经人工感染试验证明其中1株为致病菌。该菌株为革兰氏阴性短杆菌，无动力，32℃以上不生长。氧化酶阳性。发酵葡萄糖产酸不产气。经BIOLOG MICROSTATION SYSTEM鉴定为鸭瘟巴斯德氏菌（Pasteurella anatipestifer)。药敏试验表明，该菌株对呋喃唑酮、呋喃妥因、氟哌酸、丁胺卡那和环丙沙星敏感。  相似文献   

Palaeolimnological studies of the eutrophication of volcanic Lake Albano (Central Italy)     

Andrea Lami  Frank Niessen  Piero Guilizzoni  Julieta Masaferro  Claudio A. Belis 《Journal of Paleolimnology》1994,10(3):181-197

We use palaeolimnological techniques to reconstruct the eutrophication history of a volcanic lake (Lake Albano, central Italy) over the past three centuries. The presence of annual varves down to the bottom of the core (c. 1700 A.D.) indicated the lack of bioturbation and likely long-term meromixis. Sedimentation rates were estimated by varve counts (calcite/diatom couplets), indicating a mean rate of 0.15 cm yr^–1. The reconstruction of eutrophication was traced using past populations of algal and photosynthetic bacteria (through their fossil pigment), and geochemistry, as well as fossil remains of chironomids. Phaeophorbidea and the red carotenoid astaxanthin were used to detect past zooplankton development.The first sign of trophic change related to human activities is datedc. 1870 A.D. From that period onward a sharp increase of authigenic CaCO₃, nitrogen, N:P ratio, and dinoxanthin, a characteristic carotenoid of Chrysophyceae and Dinophyceae, is observed.Chironomid analyses showed the near absence of a deep water fauna throughout the core length. The populations of chironomid larvae are restricted to oxygenated littoral zones. In fact, the few fossil remains found are primarily of littoral origin, representing shallow water midges that were transported to profundal waters. The reduction of total chironomid in the uppermost layers of the core is to be related to human land uses.  相似文献   

总磷作为饮用水生物稳定性控制指标的研究   总被引：13，自引：0，他引：13       下载免费PDF全文

桑军强  张锡辉  周浩晖  王占生 《水科学进展》2003,14(6):720-724

根据国内提出的控制饮用水生物稳定性的可同化有机碳(AOC)标准,通过配制水样研究了AOC及细菌再生长潜力(BRP)同水中磷含量的关系;同时针对净水工艺试验出水水样,考察了水中的磷同其生物稳定性的关系。结果表明,对于配水水样,在一定的磷浓度范围内,磷是水中细菌生长的限制因子;在净水试验工艺出水水样中添加50μg/L的PO₄3--P后,AOC增加了55%,BRP增加了123%,表明水中磷是其生物稳定性的限制因子。由于常规的净水工艺对水中的磷可以有效去除,把水中总磷(TP)控制在5μg/L内来提高饮用水生物稳定性具有一定的可能性和现实性。  相似文献   

Effet de la teneur en eau d'un sol sur la réduction bactérienne d'oxydes de fer     

Sébastien J. Stemmler  Stéphanie Loyaux-Lawniczak  Jacques Berthelin 《Comptes Rendus Geoscience》2004,336(13):1171-1179

Iron-reducing activity of autochthonous bacteria from two temporary hydromorphic soils is evaluated by the study of iron reductive dissolution, as a function of water content. The release of ferrous iron in solution is coupled to the mineralization of soil organic carbon. Water soil saturation is not necessary for iron reductive dissolution, since the highest dissolution is obtained for a wet, but not water-saturated soil (100% of water holding capacity WHC), and dissolution is also very high in a soil at 75% WHC. To cite this article: S.J. Stemmler et al., C. R. Geoscience 336 (2004).  相似文献   

大弹涂鱼(Boleophthalmus pectinirostris) Gal-8L基因序列及其细菌凝集活性的鉴定     

梁亚芳  史雨红  苗亮  陈炯 《海洋与湖沼》2018,49(2):413-421

半乳糖凝集素-8基因(galectin-8,Gal-8)属于凝集素家族一员。已知Gal-8在哺乳动物的先天免疫中发挥重要作用,然而在鱼类中却鲜有报道。本研究通过转录组测序获得大弹涂鱼(Boleophthalmus pectinirostris)半乳糖凝集素-8样基因(galectin-8 like,Bp Gal-8L)c DNA序列。首先确定其序列特征,其次采用实时定量PCR(real-time quantitative PCR,q PCR)的方法鉴定Bp Gal-8L组织表达分布及其与迟缓爱德华氏菌(Edwardsiella tarda)感染相关性;最后分别通过原核表达获得N端和C端CRD区重组蛋白Bp Gal-8L-N和Bp Gal-8L-C,并采用玻片法观察这两个CRD区的细菌凝集活性和糖类结合特性。多重序列比对显示,Bp Gal-8L蛋白含有两个糖识别结构域(carbohydrate recognition domain,CRD),但只有C端的CRD区存在Gal家族典型的β-半乳糖苷糖类结合基序。系统进化树表明Bp Gal-8L属于鱼类Gal-8的一种亚型。q PCR结果显示,Bp Gal-8L基因m RNA在各组织中普遍表达,并且在迟缓爱德华氏菌感染后大弹涂鱼肝和脾中表达量呈上调趋势。细菌凝集实验结果显示,只有Bp Gal-8L-C重组蛋白对检测的5种革兰氏阴性菌及2种革兰氏阳性菌有凝集作用,并与乳糖和脂多糖特异性结合。综上所述,Bp Gal-8L与大弹涂鱼抗菌免疫密切相关,且其N端和C端CRD区发挥不同作用。  相似文献   

MALBAC技术扩增微生物群落基因组的效率评估     

王勇  高兆明  徐颖  李光玉  贺丽生  钱培元 《海洋学报(英文版)》2016,35(2):131-136

环境样品的低生物量是微生物宏基因组学研究面临的首要挑战,通过基因组扩增技术来满足高通量测序对DNA样品量的需求是最常用的解决策略。MALBAC(Multiple Annealing and Looping Based Amplification Cycles)基因组扩增试剂盒最初为扩增和研究哺乳动物的单细胞基因组而研发。本文中,我们通过人工构建的微生物群落来检测该试剂盒在微生物宏基因组扩增方面的效率和应用可行性。结果表明,每个标准反应中,10 pg的DNA模板量足以满足MALBAC试剂盒对样品扩增的需要。每个标准反应DNA模板用量为10和100 pg时,所扩增DNA样品的基因组覆盖度与原始未扩增样品表现出高度的一致性,证明MALBAC试剂盒扩增效果的高度稳定性和一致性。常用的GenomePlex全基因组扩增试剂盒使我们可以在每个标准反应DNA模板量为100 pg的条件下扩增获得足够的DNA样品,但是结果表明该参照试剂盒无法有效的实现对群落中低丰度细菌菌株基因组的线性扩增。对于MALBAC试剂盒和参照试剂盒而言,在扩增高GC含量的微生物物种基因组DNA方面效率低下。我们的实验结果表明MALBAC试剂盒在高效扩增环境样品宏基因组DNA方面的可行性,但对该试剂盒在扩增环境样品中高GC含量微生物物种方面的适用性存在疑虑。  相似文献   

A seasonal comparison of prokaryote numbers,biomass and heterotrophic productivity in waters of the KwaZulu-Natal Bight,South Africa     

D Muir  T Kunnen 《African Journal of Marine Science》2016,38(1):S123-S138

The KwaZulu-Natal Bight is a shallow indentation of the eastern seaboard of South Africa, characterised by a narrow (45 km wide) extension of the continental shelf, with a shelf break at about 100 m. It has a complex hydrography: the waters of the bight are derived from the fast-flowing, southward-trending Agulhas Current, which is fed mostly by the tropical and subtropical surface waters of the South-West Indian Ocean subgyre, which are generally oligotrophic in nature, notably depleted in reduced nitrogen and phosphate except at river mouths and during periodic upwelling of deeper nutrient-rich water. Despite this, the bight is believed to be relatively productive, and it is suggested that efficient nutrient recycling by prokaryotes may sustain primary productivity efficiently, even in the absence of new nutrient inputs. Here we have measured bacterial numbers, biomass and heterotrophic productivity during summer and winter in conjunction with phytoplankton standing stock and factors that influence it. Bacterial distribution closely matched phytoplankton distribution in surface waters, and was highest close to the coast. Bacterial standing stocks were similar to those of oligotrophic systems elsewhere (0.5–5.0 × 10⁵ cells ml^–1; 1 × 10^–8 to 1.25 × 10^–7 g C ml^–1) and increased in association with the development of phytoplankton blooms offshore and with inputs of allochthonous material by rivers at the coast. Heterotrophic productivity in summer was lowest in the far south and north of the bight (0.5 × 10^–10 g C ml^–1 h^–1) but higher close to the shore, over shallow banks, and in association with increased phytoplankton abundance over the midshelf (1.0–3.5 × 10^–9 g C ml^–1 h^–1). There were marked seasonal differences with lower bacterial standing stocks (5 × 10⁴ to 2 × 10⁵ cells ml^–1; 4–5 × 10^–9 to 1–2 × 10^–8 g C ml^–1) and very low bacterial productivity (4 × 10^–11 to 1 × 10^–10 g C ml^–1 h^–1) in winter, probably resulting from lowered rates of primary productivity and dissolved organic matter release as well as reduced riverine allochthonous inputs during the winter drought.  相似文献   

微生物对地下水中萘的降解特性及动力学研究     

张晟瑀  张朦幻  王利刚  万玉玉 《地学前缘》2021,28(5):146-158

针对我国东北某石油烃污染场地地下水中的萘污染,筛选出了Acinetobacter和Pseudomonas菌属的高效萘降解菌群。该菌群对萘的耐受性较高,且具有良好的乳化性,能够自动调节细胞表面疏水性和自聚集性。不同pH值、萘初始浓度、温度和菌接种量对萘降解效率的影响研究表明:最适菌群生长的pH范围为7.08.0;萘降解效率和速率在1.005.00 mg/L范围内与其初始浓度成正比;在1030 ℃温度范围内均表现出较高的萘降解效率。在此基础上,利用Guass、GuassAmp、LogNomal、Poisson和Pulse数学模型对萘的降解过程进行拟合,其降解速率更符合GuassAmp模型。通过将降解动力学模型中的常数与影响因素相关联,推导出了拟合度较高的多因素影响下的萘降解动力学方程。  相似文献   

原始黄铁矿莓体的发现与研究     

余江滨  潘侊 《矿物学报》1988,(4)

用扫描电子显微镜研究晋东南太原组下部黄铁矿矿石和煤岩中的黄铁矿,发现许多原始莓体保留着形成时的特征。这些特征反映出原始莓体大多数为硫磺细菌化石,少数由胶体形成。本文对莓体的成因、特征、形成环境等进行了论述。  相似文献