Application of the first internal transcribed spacer(ITS-1) of ribosomal DNA as a molecular marker to population analysis in farrer''s scallop Chlamys farreri     

YU Ziniu  WEI Xiaohu  KONG Xiaoyu  YU Shanshan 《海洋学报(英文版)》2007,26(1):93-100

Sequence variation of the first internal transcribed spacer of ribosomal DNA （ ITS - 1 ） was examined and its application to the study of genetic variation was explored in four populations of farter＇ s scallop Chlamys farreri. ITS - 1 fragments, with a length of about 300 bp,of 78 individuals collected from Dalian, Qingdao, Yantai in China and Korea respectively were amplified via PCR, cloned and sequenced. Intra-genomic variation was examined by sequencing several clones of single individuals. Alignment and polymorphism analysis detected 44 haplotypes and 50 polymorphic sites which consist of 30 substitutions and 20 indels, indicating a high level of polymorphisms. Sequence analysis also showed a very low level of intra-individual variation. All these features validated the feasibility of application of ITS - 1 fragment to population analysis. Polymorphism analysis showed that the Korea sample has the richest genetic variation, followed by Yantai and Qingdao samples. AMOVA （analysis of molecular variance） showed that the majority （96.26%） of genetic variation was distributed within populations and 3.74% resulted from among populations, but with P 〈 0.05 （ = 0.042）, indicating that the populations in this study have significant divergence. This output was basically concordant with the result arising from RAPD data and different from that from mitochondrial 16S rDNA sequence data. Discussion on this inconsistency was made accordingly.  相似文献   

外差激光雷达测量水体布里渊散射可行性研究   总被引：1，自引：0，他引：1  

刘金涛  陈卫标  宋小全  刘智深 《中国海洋大学学报(自然科学版)》2002,32(1):139-144

该文分析外差激光雷达测量水体布里渊散射的可行性。借助测量水体布里渊散射的频移 ,可得到水体声速或温度。文中利用两条 12 7I2 吸收线锁定激光输出频率 ,产生稳定的频差约为7.5 GHz发射激光和激光本振。通过对 12 7I2 吸收线稳定度、激光频率稳定度、系统信噪比和反演精度的分析和计算机模拟 ,得出水体深度 2 5 m以内水体布里渊散射频移的测量误差可以控制在2 .5 MHz以内 ,达到水中声速 0 .6 m/ s或温度 0 .1℃的测量精度。  相似文献   

基于网络药理学与分子对接技术探讨青蛇方外用治疗湿疹的作用机制          下载免费PDF全文

王家辉  王军文  彭湘宁 《应用海洋学学报》2024,40(2):189

目的：基于网络药理学与分子对接技术探讨青蛇方外用治疗湿疹的作用机制。方法：应用TCMSP和UniProt数据库平台查询青蛇方组方的有效活性成分及靶基因,与疾病靶基因取交集后构建蛋白质-蛋白质相互作用(PPI)网络;应用DAVID数据库,对潜在核心作用靶点基因进行基因本体（GO）功能、京都基因与基因组百科全书（KEGG）通路富集分析。利用分子对接原理论证青蛇方生物活性成分与核心靶点的分子结合能力。结果：筛选出青蛇方有效成分63种,作用靶点99个;主要有β-谷甾醇、2,4,7-三羟基-9,10-二氢菲、靛蓝素、豆甾醇、色氨酸等关键成分;转录因子AP-1（JUN）、肿瘤坏死因子（TNF）、原癌基因（RELA）、干扰素γ（IFNG）、转化生长因子-β1（TGF-β1）等核心基因。关键信号通路有癌症信号通路、恰加斯病通路、弓形体病通路、脂质和动脉粥样硬化通路等,分子对接结果显示活性成分与核心靶点基因结合能力较强。结论：青蛇方外用可以通过多种活性成分、多种通路有效抑制免疫炎症反应,促进免疫系统正常运行,从而达到治疗湿疹的目的。  相似文献   

Effects of low molecular weight organic acids on sorption and desorption behavior of p-chlorophenol by yellow earth     

Daoyong ZHANG Xiangliang PAN Shuimu LIAO Chenglin HUANG Jingmei ZHANG 《中国地球化学学报》2006,25(B08):133-133

Low molecular weight organic acids （LMWOAs） are important components of root exudates. They play an important role in immobilizing and remobilizing contaminants in rhizospheric soil. Effects of four LMWOAs on the sorption and desorption behavior of p-chlorophenol by yellow earth was studied in batch mode. The results showed that the previous application of LMWOAs to enhanced adsorption capacity of p-chlorophenol of the soil in the order of maleic acid〉malic acid〉oxalic acid〉citric acid. However, when LMWOAs were applied to soil where p-chlorophenol had been previously adsorbed, substantial p-chlorophenol was desorbed from soil by oxalic acid, whereas citric acid, malic acid and maleic acid didn＇t desorb as much p-chlorophenol from soil as deionized water.  相似文献   

南极菌Pseudoalteromonas sp．S-15-13产胞外多糖的研究及其分子鉴定   总被引：2，自引：1，他引：2       下载免费PDF全文

李江  陈靠山  林学政  李光友 《极地研究》2006,17(2):130-135

本文对影响南极细菌S-15-13生长和胞外多糖产量的主要环境因子进行了研究,同时采用16S rDNA序列分析及系统发育分析方法对其进行了分子鉴定。结果表明：菌株S-15-13最佳产糖条件为：培养时间,56h；培养温度,8℃；碳源,1．0%葡萄糖；NaCl浓度,3．0%；pH,6．0-7．0。16S rDNA序列分析和系统发育分析表明,菌株S-15-13属于假交替单胞菌属(Pseudoaltero- monas)。  相似文献   

饱和烃经5à分子筛络合前后单体烃碳同位素分析对比研究     

杜丽  李立武  孟仟祥  房玄  丁万仁  王广 《沉积学报》2005,23(4):747-752

通过对自配标准样品(正构烷烃)进行5à分子筛吸附试验,测定了用5分子筛吸附法分离前后正构烷烃、异构烷烃和环烷烃碳同位素值,探讨试验前后碳同位素值的变化。尽管实验过程中样品经过85℃长时间加热回流及吸附样品的5à分子筛用氢氟酸酸化处理,但实验结果经仪器检测,证明该方法对正构烷烃碳同位素值影响因素不大。本文还介绍了原油和煤可溶有机质中饱和烃络合前后的单体烃碳同位素分析方法。并在前人工作的基础上,改进采用微型索氏抽提加热回流实验装置,既提高了样品的回收率,也减少了样品中轻组分的损失。  相似文献   

金刚石中分子氢的赋存状态研究   总被引：1，自引：0，他引：1  

杨志军  彭明生 《矿物岩石》2003,23(3):9-12

金刚石中分子氢的定向红外光谱研究表明在垂直于(100),(110)和(111)三个方向上所测得分子氢的浓度是不相同的,且不同样品中的变化趋势也不同,即分子氢在金刚石中的定向性不明显;MNDO法计算结果显示分子氢在金刚石中的稳定程度大小关系依次为沿〈111〉定向的键心与反键心组合(a.b+b.c)〉六角体空隙(H)〉四面体空隙(T1)〉菱形中心(C1＝C2)〉四面体空隙(T2).  相似文献   

睡莲类植物ITS nrDNA序列的分子系统发育分析   总被引：6，自引：0，他引：6  

唐先华  张晓艳等 《地球科学》2003,28(1):97-101

睡莲类植物是目前植物分子系统学与进化研究的一个重要类群。核基因组的ITS区是核核糖体（nrDNA)转录单位的一部分。测定和分析了5个属的7种睡莲类植物的核核糖体ITS序列，并与GenBank中提取的相关序列进行了组合分析，初步获得了睡莲类植物的2个ITS系统树，结果也支持现有分子系统学研究中有关金鱼藻处于较原始位置的观点。  相似文献   

生物标志化合物与相关的全球变化   总被引：20，自引：9，他引：20  

谢树成  梁斌  郭建秋  易轶  R.P.Evershed  D.Maddy  F.M.Chambers 《第四纪研究》2003,23(5):521-528

在各种地质体中广泛分布的生物标志化合物在全球变化研究中有着广泛应用,特别是在海洋和湖泊沉积物中,研究工作已涉及到古植被、古温度、古降水量、古大气CO₂浓度和古季风等的恢复.文章介绍利用气相色谱仪、气相色谱-质谱联用仪、气相色谱-热转换-同位素比质谱仪分析了一个长40cm泥炭岩芯(约222年)的生物标志化合物的分布及其单体氢同位素.结果显示,不管是生物标志化合物的分布,还是其单体稳定同位素特征都记载了气候(温度)的变化.正构脂肪酸的碳优势指数(CPI值)、正构烷烃C23/C31比值、正构烷烃C23的δD值与温度有很好的对应关系.  相似文献   

Environmental Properties of Minerals and Contaminants Purified by the Mineralogical Method   总被引：2，自引：0，他引：2  

LU Anhuai School of Earth  Space Sciences  Peking University  Beijing 《《地质学报》英文版》2004,78(1):191-202

The investigation of the environmental properties of minerals, i.e., environmental mineralogy, is a branch of science dealing with interactions between natural minerals and spheres of the Earth surface as well as a reflection of global change, prevention of ecological destruction, participation in biomineralogy, and remediation of environmental pollution. Pollutant treatment by natural minerals is based on the natural law and reflects natural self-purification functions in the inorganic world, similar to that of the organic world - a biological treatment. A series of case studies related to natural self-purification, which were mostly completed by our group, are discussed in this paper. In natural cryptomelane there is a larger pseudotetragonal tunnel than that formed by [MnO6] octahedral double chains, with an aperture of 0.462-0.466 nm2, filled with K cations. Cryptomelane might be a real naturally-occurring mineral of the active octahedral molecular sieve (OMS-2). CrⅥ-bearing wastewater can be treate  相似文献