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1.
The study investigated the global and regional phylogeography of the yellowtail kingfish Seriola lalandi by examining genetic diversity and population genetic structure of this species at inter-and intra-ocean level and on a regional scale. DNA fragments of two mitochondrial genes, cytochrome b (Cytb) and cytochrome c oxidase subunit I (COI) and one nuclear gene, recombination activating gene 1 (RAG1), were sequenced to investigate the global-scale phylogeography of this species. The population genetic structure within the South Pacific, as well as along the South African coastline, was examined further using six microsatellite markers. Three distinct clades were identified for S. lalandi, which correspond with previously described subspecies of the North-East Pacific, North-West Pacific and the Southern Hemisphere. Within the latter, additional divergence was observed between the South Pacific and the South-East Atlantic regions. Divergence estimates were indicative of a Pacific origin for S. lalandi populations, because of Pleistocene vicariant events. Microsatellite analyses revealed overall significant genetic differentiation between South African and South Pacific samples. This corroborates recent findings on the global phylogeography of the species. No population differentiation was observed within South Africa, indicating high levels of gene flow.  相似文献   
2.
Groundwater samples from 288 domestic wells in Barry County, Michigan, were analyzed for 33 inorganic chemical parameters. Variations in chemical composition were investigated by considering the possible effects of human impact, aquifer type (bedrock vs glacial drift), chemical evolution along groundwater flow paths, and glacial landform type (moraine vs outwash). Approximately 25 percent of the glacial drift wells were classified as degraded by human impact and were excluded from further analysis of chemical variation. Two-sample tests comparing individual concentrations from drift and bedrock aquifers suggest that groundwater in the Marshall Sandstone aquifer is derived from local recharge through the glacial drift. This conclusion is supported by generalized groundwater flow patterns recognized for the two aquifers.Concentrations in both aquifers were examined in relation to generalized flow paths derived from water level data and also by classification of wells as recharge, transition, and discharge. No spatial concentration trends in major ions were detected, although iron concentrations do appear to increase from recharge to discharge areas. Declining redox potential along groundwater flow paths may explain this trend.The possible influence of glacial landform type was investigated by comparing concentrations of wells in moraines with those in outwash deposits. Wells in moraines have significantly higher concentrations of most parameters, perhaps due to higher content of finer, more chemically reactive sediment grains.  相似文献   
3.
Neural network modeling applications in active slope stability problems   总被引:3,自引:2,他引:1  
A back propagation artificial neural network approach is applied to three common challenges in engineering geology: (1) characterization of subsurface geometry/position of the slip (or failure surface) of active landslides, (2) assessment of slope displacements based on ground water elevation and climate, and (3) assessment of groundwater elevations based on climate data. Series of neural network models are trained, validated, and applied to a landslide study along Lake Michigan and cases from the literature. The subsurface characterization results are also compared to a limit equilibrium circular failure surface search with specific adopted boundary conditions. It is determined that the neural network models predict slip surfaces better than the limit equilibrium slip surface search using the most conservative criteria. Displacements and groundwater elevations are also predicted fairly well, in real time. The models’ ability to predict displacements and groundwater elevations provides a foundational framework for building future warning systems with additional inputs.  相似文献   
4.
AQUIPRO, a PC-based method, was used to assess aquifer vulnerability using digital water well logs. The AQUIPRO model is a parameter/factor weighting system for rating the pollution potential of an aquifer. This method uses the well depth, as well as the clay and partial clay thickness in a well, to generate pollution potential scores. In this model, aquifer protection increases as the AQUIPRO vulnerability scores increase and ground water pollution potential decreases. Computerized water well records of 2435 domestic wells with partial chemistry data were used to determine the ground water pollution potential of Kalamazoo County, Michigan. Theoretically, low AQUIPRO pollution potential scores should have more frequent occurrences of ground water contamination events than areas with high AQUIPRO scores with similar land-use, well construction, and well densities. The relative AQUIPRO scores were compared with the frequency of occurrences of nitrate-N in ground water wells. The average nitrate-N concentrations within each relative AQUIPRO vulnerability scores category were also compared. The results indicate that domestic wells containing 5 mg/L or more nitrate-N showed a positive correlation between the frequency of occurrences of nitrate-N and relative decrease of AQUIPRO (r2 = 0.99) vulnerability scores. In other words, as the ground water pollution potential increases, the occurrence frequency of nitrate-N also increases. Furthermore, the results show that as the relative AQUIPRO (r2 = 0.96) vulnerability scores decrease, the mean nitrate-N concentrations also increase.  相似文献   
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Concentration trends of monitor wells utilized in monitored natural attenuation at petroleum underground storage tank sites can be used to predict achievement of regulatory standards if the data approximate a first-order decline trend. However, declining concentration trends often display seasonal and other fluctuations that complicate trend interpretation. Seasonal correlations between concentration and water-level elevation, including in-phase and inverse relationships, constitute one of the most common types of variation. The in-phase fluctuations are most common for monitor wells located in or near the source area of the release. This relationship may be the result of increased contact with the smear zone in the source area during periods of high water table. Conversely, inverse trends of water-level elevation and concentration are most common in downgradient wells beyond the limit of the source area. In a year long study of short-term fluctuations in BTEX and other parameters in a downgradient monitor well, the data suggest that the winter/spring recharge event significantly controls the concentration trends of BTEX as well as inorganic compounds in the well. Recharge and associated water table rise began in late fall and were soon followed by a slug of inorganic ions strongly influenced by road salt application. This slug of recharge diluted the concentrations of petroleum compounds and alkalinity (bicarbonate). Electron acceptors including oxygen, nitrate, and sulfate, which is a component of road salt, are also contributed to the water table during recharge. Oxygen and nitrate were not detected in the monitor well samples and were most likely consumed quickly in biodegradation reactions at the top of the contaminant plume. Sulfate peaked during winter/spring recharge and then slowly declined during the summer and fall, along with redox potential. Alkalinity (bicarbonate) increased during this period, which may represent the coupled oxidation of organic carbon to CO2 with sulfate as the electron acceptor. BTEX concentrations peaked in the fall probably due to the lack of diluting recharge. The slow changes in concentration over the summer and fall months, interpreted to be caused by biodegradation, contrast with the rapid changes associated with dilution during the recharge event.  相似文献   
8.
Genomic data can be a useful tool in the management and conservation of biodiversity. Here, we report the development of genomic resources for the spotted ragged-tooth shark Carcharias taurus using genome-wide DNA data from Illumina next-generation sequencing. We explored two commonly used genetic marker types: microsatellites and mitochondrial DNA. A total of 4 394 putative microsatellites were identified, of which 10 were tested on 24 individuals and found to have ideal properties for population genetic analyses. Additionally, we reconstructed the first complete mitochondrial genome of a South African spotted ragged-tooth shark, and highlight the most informative gene regions to facilitate future primer design. The data reported here may serve as a resource for future studies and can ultimately be applied in the sustainable conservation and fisheries management of this apex predator.  相似文献   
9.
Tunnel valleys are common throughout the terrain of the Saginaw Lobe of the Laurentide Ice Sheet in southern Michigan. The set of valleys described in this paper is regularly spaced in a radial pattern behind the Kalamazoo Moraine, an ice‐marginal position formed during retreat from the Last Glacial Maximum. These valleys are divided into proximal and distal groups lying north and south, respectively, of a major river valley that cross‐cuts the tunnel valleys at right angles. Based on a series of rotasonic borings and core analysis, the proximal valleys are shallow, contain minimal sediment fill, and overlie fine‐grained diamicton and glaciolacustrine sediment, whereas the distal valleys are deeply incised into the substrate and are partially filled with coarse sediment. The distal valleys terminate within a broad zone of high‐relief, hummocky topography representing stagnation and collapse behind the Kalamazoo ice margin. The proximal valleys occur within a more subdued landscape located farther from the ice margin. Although some elements of existing genetic models are consistent with these valleys, none appears to be completely compatible with their stratigraphy and morphology. Initial incision of the valleys could have involved short‐lived moderate‐ to high‐discharge flows, followed by deposition during or after the events. The deep incision and thick, coarse sediment in distal valleys in the stagnant marginal zone probably involved supraglacial meltwater draining to the bed as the margin downwasted. Fining‐upward eskers inset into the valleys were formed by flows of declining energy in small late‐stage conduits.  相似文献   
10.
The species-rich genus Mustelus (smoothhounds) of the shark family Triakidae is one of the most bio-economically important groups of elasmobranchs in the world’s oceans. Despite the commercial value of Mustelus, the systematics of the group remains largely unresolved and there is no global review or synthesis of knowledge about the conservation status and conservation genetics of smoothhounds across all oceanic regions. Here, we analysed published studies as well as grey literature to gain insight into the biogeographic, ecological and behavioural factors that shape genetic diversity in smoothhounds, and we identify critical knowledge gaps. From a series of molecular phylogenetic studies it can be inferred that the genus Mustelus is paraphyletic and that the aplacental species evolved secondarily from the placental species of the genus. The increasing availability of genetic data aids in disentangling systematic issues, such that more meaningful morphological characters can be chosen for use in practical field-identification keys for co-occurring smoothhounds. An integrative taxonomic approach to the genus Mustelus may offer the best chance of recording and protecting the biodiversity of these sharks. Furthermore, it is evident that different smoothhound species exhibit unique gene-flow patterns, suggesting varying rates within species and hence that species-level conservation approaches would be most appropriate. Molecular studies have advanced our understanding of smoothhound biology (including reproductive traits), ecology and evolution. While many knowledge gaps remain, a crucial lesson from this review is that, when doing assessments on a molecular level, it is important to place genetic results in a broader context, by assimilating biological and ecological data, if definitive conclusions are to be drawn.  相似文献   
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