Preservation of the shell matrix protein dermatopontin in 1500 year old land snail fossils from the Bonin islands     

Isao Sarashina  Yoshiki Kunitomo  Minoru Iijima  Satoshi Chiba  Kazuyoshi Endo   《Organic Geochemistry》2008,39(12):1742

Organic molecules such as proteins can be preserved in certain fossils. The bulk properties of fossil proteins of both vertebrates and invertebrates have been studied for over half a century. Named proteins have so far been identified, however, only in vertebrate fossils, such as collagen from mammoth bones. Using immunological assays, we examined 1500 year old fossils of the extinct land snail Mandarina luhuana from the Bonin islands for the presence of dermatopontin, a molluscan shell matrix protein. First, we examined the shell microstructure and mineralogy of the fossil shells using scanning electron microscopy (SEM) and powder X-ray diffraction (XRD) in order to estimate the extent of diagenetic alteration. The results suggest that the original microstructure and mineralogy of the shells are preserved. Antiserum raised against the Type-1 dermatopontin fragment of the living land snail Euhadra brandtii showed significant immunological reactivity with the extracts from the fossil shells of M. luhuana. Immunological binding curves drawn for the shell extracts of extant M. aureola and the extinct M. luhuana confirmed the presence of dermatopontin in the fossil shells and provided an estimate that about 75–98% of the original dermatopontin was lost from the M. luhuana fossils. This is the first report of a named protein being identified in invertebrate fossils.  相似文献   

Co-oscillating and independent tides of the Japan Sea     

Minoru Odamaki 《Journal of Oceanography》1989,45(3):217-232

The generation of tides in the Japan Sea is investigated with relation to the tidal volume fluxes at the attached straits, which are estimated with the observed tidal current data. After the tides are separated into the co-oscillating tides induced by the tidal volume fluxes and the independent tide by the tide-generating force, their contributions to the Japan Sea tides are clarified using a one-dimensional tidal model.For the semidiurnal tide, the co-oscillating tide by the Tusima Strait is dominated in all of the area except the gulf of Tartary, and those by the Tugaru and Soya Straits are not effective anywhere. In the gulf of Tartary, the amplitude of the independent tide is the same as that of the co-oscillating tide attributed to the Tusima Strait.For the diurnal tide, the independent tide is not effective anywhere. The co-oscillating tide by the Tusima Strait is largest and those by the Tugaru and Soya Straits are also influential. In particular, the shifting of the diurnal amphidromic point to the Korean side is caused by the latter.  相似文献   

Cycladophora davisiana (Radiolaria) in the Okhotsk Sea: A key for reconstructing glacial ocean conditions     

Yusuke Okazaki  Osamu Seki  Takeshi Nakatsuka  Tatsuhiko Sakamoto  Minoru Ikehara  Kozo Takahashi 《Journal of Oceanography》2006,62(5):639-648

Cycladophora davisiana, a radiolarian species dwelling at mesopelagic depths, is known as a representative glacial fauna due to its unique distribution during glacial periods. In the present ocean, abundant production of C. davisiana is only observed in the Okhotsk Sea, indicating an adaptation of C. davisiana for seasonal sea-ice covered conditions. We found pronounced abundant production of C. davisiana during the early to middle Holocene in the Okhotsk Sea, suggesting more favorable conditions for C. davisiana than the present Okhotsk Sea. In order to clarify the reason, oceanographic conditions during the Holocene were reconstructed based on biomarkers, lithogenic grains including ice-rafted debris (IRD), biogenic opal, and total organic carbon (TOC) in two sediment cores from the Okhotsk Sea. These indicators suggest that the pronounced C. davisiana production may be attributed to: 1) a supply to mesopelagic depths under intensified stratification of fine organic particles derived from coccolithophorids, bacteria, and detrital materials; and 2) cold, well-ventilated intermediate water formation.  相似文献   

Use of precipitation data for diabatic initialization to improve the tropical analysis of divergence and moisture     

Dr. A. Kasahara  Dr. A. P. Mizzi 《Meteorology and Atmospheric Physics》1996,60(1-3):143-156

Summary First, we review the present status of diabatic initialization used for numerical weather prediction and conclude that the deficiency of diabatic initialization mostly stems from the shortcoming in evaluating diabatic heating rates accurately, particularly the release of latent heat by cumulus convection. This indicates the need to adjust the initial conditions for physical processes, and Krishnamurti and his colleagues introduced in 1984 the concept of physical initialization. Since cumulus convection is most sensitive to input data among many physical processes, the adjustment of atmospheric input data to a prediction model to produce desired initial precipitation rates is referred to as cumulus initialization.In this article we describe a general approach to diabatic initialization with a special emphasis on cumulus initialization. We present the results of forecasting experiments with a version of the NCAR Community Climate Model (CCM) to demonstrate the efficacy of a cumulus initialization procedure to ameliorate the spinup problern of precipitation. Finally, we discuss application of the present methodology of cumulus initialization for a stability-dependent mass-flux cumulus parameterization of CCM2 to pave the way to complete the diabatic normal mode initialization package for CCM2. Note that the present cumulus initialization scheme can be used to assimilate into the atmospheric analysis of the tropics the precipitation rates estimated by satellite radiometric imagery data.With 8 FiguresThe National Center for Atmospheric Research is sponsored by the National Science Foundation  相似文献   

Candidate precursors: pulse-like geoelectric signals possibly related to recent seismic activity in Japan   总被引：1，自引：0，他引：1  

Yuji Enomoto  Akito Tsutsumi  Yukio Fujinawa  Minoru Kasahara  Hiroshi Hashimoto 《Geophysical Journal International》1997,131(3):485-494

Telemetric network observations of pulse-like geoelectric charge signals using a vertical dipole buried under the ground were undertaken at various observation sites over a wide area in Japan from April 1996. From continuous records of the signals during the six months following that, we attempted to select anomalous signals, possibly related to seismic electric activity. Special attention was paid to the elimination of noise resulting from industrial and meteorological electric activity, comparison with other electromagnetic signals in the VLF band and the relation between the precursor period and the distance from the eventual main shock that occurred in Japan. Four candidate precursor electric signals, which were not contaminated by industrial and meteorological electric activity, were then selected, of which the second appeared before the Akita-ken Nairiku-nanbu earthquake swarm, for which the maximum M = 5.9 occurred on 1996 August 11, and the third and fourth before the Chiba-ken Toho-oki earthquake, M = 6.6, on 1996 September 11. A tentative qualitative model explaining why the candidate precursory signal is related to stress building up before an earthquake is presented in terms of the electrification of gases released from fracturing rocks immediately prior to the main shock.  相似文献   

A study of microearthquake seismicity and focal mechanisms within the Sea of Marmara (NW Turkey) using ocean bottom seismometers (OBSs)   总被引：1，自引：0，他引：1  

Toshinori Sato  Junzo Kasahara  Tuncay Taymaz  Masakazu Ito  Aya Kamimura  Tadaaki Hayakawa  Onur Tan 《Tectonophysics》2004,391(1-4):303

We have carried out seismological observations within the Sea of Marmara (NW Turkey) in order to investigate the seismicity induced after Gölcük–İzmit (Kocaeli) earthquake (M_w 7.4) of August 17, 1999, using ocean bottom seismometers (OBSs). High-resolution hypocenters and focal mechanisms of microearthquakes have been investigated during this Marmara Sea OBS project involving deployment of 10 OBSs within the Çınarcık (eastern Marmara Sea) and Central-Tekirdağ (western Marmara Sea) basins during April–July 2000. Little was known about microearthquake activity and their source mechanisms in the Marmara Sea. We have detected numerous microearthquakes within the main basins of the Sea of Marmara along the imaged strands of the North Anatolian Fault (NAF). We obtained more than 350 well-constrained hypocenters and nine composite focal mechanisms during 70 days of observation. Microseismicity mainly occurred along the Main Marmara Fault (MMF) in the Marmara Sea. There are a few events along the Southern Shelf. Seismic activity along the Main Marmara Fault is quite high, and focal depth distribution was shallower than 20 km along the western part of this fault, and shallower than 15 km along its eastern part. From high-resolution relative relocation studies of some of the microearthquake clusters, we suggest that the western Main Marmara Fault is subvertical and the eastern Main Marmara Fault dips to south at 45°. Composite focal mechanisms show a strike-slip regime on the western Main Marmara Fault and complex faulting (strike-slip and normal faulting) on the eastern Main Marmara Fault.  相似文献   

Temperatures and Oxygen Isotopic Compositions of Hydrothermal Fluids for the Takatori Tungsten-copper Deposit, Japan     

Yasuhiro Shibue    Hitoshi Chiba    Minoru Kusakabe  Yuichi Morishita 《Resource Geology》2005,55(2):101-110

Abstract. Fluid inclusion and oxygen isotope studies are performed to obtain temperatures and oxygen isotopic compositions of hydrothermal fluids for the vein-type tungsten-copper deposit at Takatori in Ibaraki Prefecture, Japan. Temperatures of the hydrothermal fluids are calculated from fluid inclusion data. The calculation incorporates the effects of the salinity, gas concentration, and fluid pressure. The fluid temperatures range from 370 to 460C. For these calculations, this study obtains a density equation for H₂O-NaCl-CO₂ solution at the vapor-liquid two-phase boundary. Then the present study combines the obtained equation with the equation of state by Bowers and Helgeson (1983).
The fluid temperatures determined in this study are applied to the calculation of oxygen isotopic compositions of the hydrothermal fluids. The calculation of the oxygen isotopic compositions is based on the oxygen isotope analyses of vein quartz. The oxygen isotopic compositions of vein quartz range from +13.5 to +14.4 % relative to SMOW. Then, the oxygen isotopic compositions of the hydrothermal fluids in equilibrium with the vein quartz are calculated to be from +9.7 to +10.5 %. These δ¹⁸O_fluid values agree with those of magmatic fluids derived from the ilmenite-series granitic rock, which is related to the mineralization. Keywords: Takatori tungsten-copper deposit, fluid inclusion, oxygen isotope, vein quartz, H₂O-NaCl-CO₂ solution, density  相似文献   

Deducing the spatial variability of exchange within a longitudinal channel water balance          下载免费PDF全文

Noah M. Schmadel  Bethany T. Neilson  Tamao Kasahara 《水文研究》2014,28(7):3088-3103

Developing an appropriate data collection scheme to infer stream–subsurface interactions is not trivial due to the spatial and temporal variability of exchange flowpaths. Within the context of a case study, this paper presents the results from a number of common data collection techniques ranging from point to reach scales used in combination to better understand the spatial complexity of subsurface exchanges, infer the hydrologic conditions where individual influences of hyporheic and groundwater exchange components on stream water can be characterized, and determine where gaps in information arise. We start with a tracer‐based, longitudinal channel water balance to quantify hydrologic gains and losses at a sub‐reach scale nested within two consecutive reaches. Next, we look at groundwater and stream water surface levels, shallow streambed vertical head gradients, streambed and aquifer hydraulic conductivities, water chemistry, and vertical flux rates estimated from streambed temperatures to provide more spatially explicit information. As a result, a clearer spatial understanding of gains and losses was provided, but some limitations in interpreting results were identified even when combining information collected over various scales. Due to spatial variability of exchanges and areas of mixing, each technique frequently captured a combination of groundwater and hyporheic exchange components. Ultimately, this study provides information regarding technique selection, emphasizes that care must be taken when interpreting results, and identifies the need to apply or develop more advanced methods for understanding subsurface exchanges. Copyright © 2013 John Wiley & Sons, Ltd.  相似文献   

Geological and geophysical studies of the Agoudal impact structure (Central High Atlas,Morocco): New evidence for crater size and age     

Houda El Kerni  Hasnaa Chennaoui Aoudjehane  David Baratoux  Mohammed Aoudjehane  Andr Charrire  Hassan Ibouh  Pierre Rochette  Yoann Quesnel  Minoru Uehara  Thomas Kenkmann  Gerwin Wulf  Michael Poelchau  Van Binh Nguyen  Maria Aboulahris  Samira Makhoukhi  Georges Aumaître  Didier Bourls  Karim Keddadouche 《Meteoritics & planetary science》2019,54(10):2483-2509

Since the discovery of shatter cones (SCs) near the village of Agoudal (Morocco, Central High Atlas Mountains) in 2013, the absence of one or several associated circular structures led to speculation about the age of the impact event, the number, and the size of the impact crater or craters. Additional constraints on the crater size, age, and erosion rates are obtained here from geological, structural, and geophysical mapping and from cosmogenic nuclide data. Our geological maps of the Agoudal impact site at the scales of 1:30,000 (6 km²) and 1:15,000 (2.25 km²) include all known occurrences of SCs in target rocks, breccias, and vertical to overturned strata. Considering that strata surrounding the impact site are subhorizontal, we argue that disturbed strata are related to the impact event. Three types of breccias have been observed. Two of them (br1‐2 and br2) could be produced by erosion–sedimentation–consolidation processes, with no evidence for impact breccias, while breccia (br1) might be impact related. The most probable center of the structure is estimated at 31°59′13.73?N, 5°30′55.14?W using the concentric deviation method applied to the orientation of strata over the disturbed area. Despite the absence of a morphological expression, the ground magnetic and electromagnetic surveys reveal anomalies spatially associated with disturbed strata and SC occurrences. The geophysical data, the structural observations, and the area of occurrence of SCs in target rocks are all consistent with an original size of 1.4–4.2 km in diameter. Cosmogenic nuclide data (³⁶Cl) constrain the local erosion rates between 220 ± 22 m Ma^?1 and 430 ± 43 m Ma^?1. These erosion rates may remove the topographic expression of such a crater and its ejecta in a time period of about 0.3–1.9 Ma. This age is older than the Agoudal iron meteorite age (105 ± 40 kyr). This new age constraint excludes the possibility of a genetic relationship between the Agoudal iron meteorite fall and the formation of the Agoudal impact site. A chronolgy chart including the Atlas orogeny, the alternation of sedimentation and erosion periods, and the meteoritic impacts is presented based on all obtained and combined data.  相似文献   

Habitability analyses of aquatic bacteria     

Md. Nurul Haider  Masahiko Nishimura  Minoru Ijichi  Ching-chia Yang  Wataru Iwasaki  Kazuhiro Kogure 《Journal of Oceanography》2018,74(2):197-207

Habitability is defined as an ability of an organism to inhabit different environments. Habitability of organisms, however, cannot be inferred from analyses such as a whole genome or community structures. A recently developed database, the MetaMetaDB, gives us information from what kind of environments one particular 16S rRNA sequence data has ever been obtained, and thus enables us to infer the habitability of the bacterium in question. In order to check the applicability of this database to study the habitability of aquatic bacteria, samples collected at two Naka River stations, one estuarine station from Naka River Estuary, two coastal stations at Oarai in Ibaraki Prefecture, Japan and one station in the Kuroshio Current of the western North Pacific were examined. The phylotypes were tracked against the MetaMetaDB and it was reasonably found that the low-salinity stations were dominated by sequences with “freshwater and groundwater”, “human” and “wastewater” habitat identities, while the high-salinity stations were dominated by those with a “marine” identity. The phylotypes of low-salinity stations with a particular habitat identity were absent or rare in the high-salinity stations and vice versa. The MetaMetaDB also showed that sequences of Cyanobacteria or related phylogenetic groups may be present in the human gut, as well as the probable distribution of the relatives (ancestors/descendants/siblings) of some bacteria. These overall findings proved that the MetaMetaDB is useful as a new tool to infer microbial habitability and it gives us new information on the possible origin and ecology of microorganisms in the environments.  相似文献