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《中国海洋湖沼学报》2021,(5)
Humpback grouper Cromileptes altivelis is one commercial fish with considerable economic value.To determine the expression stabilities of six commonly used internal reference genes in C.altivelis challenged by Vibrio harveyi and viral nervous necrosis virus(VNNV) through quantitative real-time PCR(qRT-PCR),the expression levels of selected genes in five immune organs stimulated with pathogenic infection were carefully evaluated using algorithms of geNorm,NormFinder,and BestKeeper.The results show that the expre ssion stabilities of the six candidate inte rnal reference genes were diffe re nt.Under no rmal physiological conditions,RPL13 were identified as the most stably expressed genes among five different immune organs(liver,spleen,kidney,intestine,and gill).After V.harveyi stimulation,RPL13,RPL13,EF1 A,RPL13,and EF1 A were identified by geNorm,NormFinder,and BestKeeper as the most stable genes in liver,spleen,kidney,intestine,and gill,respectively.Combining these three algorithms suggested that under stimulation of VNNV,RPL13,EF1 A,Actin,RPL13,and Actin were as the most stable genes in liver,spleen,kidney,intestine,and gill,respectively.These results suggest that specific experiment conditions and tissue types shall be considered when selecting the reference genes in qRT-PCR analysis.This study provided a solid foundation for future studies on gene expression of C.altivelis under different conditions. 相似文献
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为筛选能在马氏珠母贝外套膜边缘膜与中央膜区域稳定表达的内参基因,应用荧光定量PCR 技术,对3-磷酸脱氢酶（GAPDH）、β-肌动蛋白（β-actin）、胆色素原脱氨酶（PBGD）、微管蛋白（TUB）、TATA 盒结合蛋白（TBP）、磷脂酶A2（PLA-2）、葡萄糖苷酶（GUSB）、18S 核糖体rRNA（18SrRNA）等8 个常用的内参基因在马氏珠母贝外套膜边缘膜与中央膜区域的表达情况进行分析,并利用geNorm、NormFinder、BestKeeper 及RefFinder 软件对8 个内参基因的表达稳定性进行分析.结果表明：8 个内参基因均可获得特异性扩增产物,但稳定性各异, 其在外套膜边缘膜和中央膜区的表达稳定性顺序依次为PBGD/TBP〉TUB〉GUSB〉18SrRNA〉PLA-2〉GAPDH〉 β-actin;在荧光定量PCR 中,PBGD 和TBP 在马氏珠母贝外套膜边缘膜和中央膜区的表达比较稳定,为研究贝壳矿化机制中理想的内参基因. 相似文献
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The appropriate reference gene is a prerequisite for accurate normalization of gene expression level, and research on suitable reference genes in clam Cyclina sinensis is scarce. To improve the situation, we selected five commonly used housekeeping genes, including β-actin, Elongation factor 1-α (EF1-α), Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), 40S ribosomal protein S18 (RPS18), and Tubulin α (TUB-α), then evaluated their expression stability in different adult tissues and under different experimental treatments (salinity stress and Vibrio parahaemolyticus infection). Their expression stability was analyzed by three frequently used programs, geNorm, NormFinder, and BestKeeper. This analysis indicated that multiple genes should be used for normalization, and we concluded that the reference gene combination GAPDH-RPS18-β-actin, should be used for qRT-PCR analysis in different tissues of C. sinensis under normal physiological conditions. For the clams under salinity stress and Vibrio infection, EF1-α-GAPDH-RPS18 was recommended as the gene combination for qRT-PCR normalization. TUB-α was generally poorly ranked by all programs, and should not be used in future studies. This study should provide fundamental support for accurate quantitative gene expression analysis of this species.
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【目的】哺乳动物pik3r1基因参与多种免疫途径,探索pik3r1基因在罗非鱼(Oreochromis)中的作用。【方法】克隆尼罗罗非鱼(Oreochromis niloticus)pik3r1(命名为On-pik3r1)cDNA全长,对该基因进行生物信息学分析,并运用荧光定量PCR方法分析无乳链球菌(Streptococcus agalactiae)刺激后On-pik3r1 mRNA在各组织种的表达模式。【结果与结论】On-pik3r1基因编码区2190 bp,编码729个氨基酸,5′端非编码区(UTR)为542 bp,3′UTR为2248 bp,理论分子质量为83.99 ku,等电点为5.73。On-pik3r1与斑马拟丽鱼(Maylandia zebra)相似性最高(98.53%),与其他物种的同源性在70%以上,表明pik3r1在物种进化过程中高度保守。On-pik3r1在健康尼罗罗非鱼各组织中均有表达,在肌肉中表达量最高,其次是鳃、皮肤,在胸腺中表达量最低。经灭活无乳链球菌刺激后,On-pik3r1表达量在肠道、鳃、脾脏、头肾、脑部等5个组织中均极显著下调(P<0.01),在胸腺中表现为4 h时极显著下调(P<0.01),24、48、72 h时为显著下调(P<0.05)。On-pik3r1参与了罗非鱼的对无乳链球菌的免疫应答过程。 相似文献
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在注射溶藻弧菌胞外产物(ECP)48 h后,石斑鱼Epinephelus akaara出现死亡,临床症状表现为:运动迟缓,体色变深,腹部膨大,腹腔有明显的积水,肝脏出血有花斑,肾脏和脾脏肿大。病理组织切片观察发现:肝细胞坏死,解体,界限模糊,细胞核变形、裂解甚至消失;肝脏出血,肝索中有红细胞浸润,有的红细胞变形甚至破裂;肾小管上皮细胞脱落、坏死;肠粘膜上皮细胞脱落、坏死,微绒毛不整齐,模糊不清,脱落;脾窦和脾索不清晰,分界不清,且在脾窦和脾索中分布着大量的、形态不规则的红细胞。此外,还发现在肝脏、脾脏、肾脏、肠壁肌层、心肌和鳃等组织中存在一种相同结构,该结构有平滑肌环绕,管腔内壁衬以扁平上皮细胞,管腔中含有一团染成紫红色的物质,经推断为小动脉透明样变性,而在正常的组织切片中,均无此结构。 相似文献
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注射黄芪多糖对吉富罗非鱼c型溶菌酶基因表达量的影响 总被引：1，自引：0，他引：1
将黄芪多糖(APS)用无菌生理盐水配制成2 mg/mL和20 mg/mL针剂,腹腔注射吉富罗非鱼,以注射无菌生理盐水为对照。24 h后分别提取吉富罗非鱼鳃、头肾、肝脏、脾脏等组织中的总RNA并反转录成cDNA,利用Real-time PCR方法对不同组织中基因表达进行定量分析。结果表明:吉富罗非鱼腹腔注射20 mg/mL高剂量APS后,其鳃、头肾、肝脏等三个组织中的Lysozyme-c基因表达量显著高于对照组(P<0.05);注射2 mg/mL低剂量APS后,Lysozyme-c基因表达量仅在脾脏中出现显著上调(P<0.05)。APS可通过诱导Lysozyme-c基因在鳃、头肾、肝脏和脾脏等组织在的表达量,来提高吉富罗非鱼的机体免疫力。 相似文献
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Lymphocystis disease, caused by the lymphocystis disease virus (LCDV), is a significant worldwide problem in fish industry
causing substantial economic losses. In this study, we aimed to develop the DNA vaccine against LCDV, using DNA vaccination
technology. We evaluated plasmid pEGFP-N2-LCDV1.3 kb as a DNA vaccine candidate. The plasmid DNA was transiently expressed
after liposome transfection into the eukaryotic COS 7 cell line. The distribution and expression of the DNA vaccine (pEGFP-N2-LCDV1.3kb)
were also analyzed in tissues of the vaccinated Japanese flounder by PCR, RT-PCR and fluorescent microscopy. Results from
PCR analysis indicated that the vaccine-containing plasmids were distributed in injected muscle, the muscle opposite the injection
site, the hind intestine, gill, spleen, head, kidney and liver, 6 and 25 days after vaccination. The vaccine plasmids disappeared
100 d post-vaccination. Fluorescent microscopy revealed green fluorescence in the injected muscle, the muscle opposite the
injection site, the hind intestine, gill, spleen, head, kidney and liver of fish 48 h post-vaccination, green fluorescence
did not appear in the control treated tissue. Green fluorescence became weak at 60 days post-vaccination. RT-PCR analysis
indicated that the mcp gene was expressed in all tested tissues of vaccinated fish 6–50 days post-vaccination. These results demonstrate that the
antigen encoded by the DNA vaccine is distributed and expressed in all of the tissues analyzed in the vaccinated fish. The
antigen would therefore potentially initiate a specific immune response. the plasmid DNA was injected into Japanese flounder
(Paralichthys olivaceus) intramuscularly and antibodies against LCDV were evaluated. The results indicate that the plasmid encoded DNA vaccine could
induce an immune response to LCDV and would therefore offer immune protection against LCD. Further studies are required for
the development and application of this promising DNA vaccine. 相似文献
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Histogenesis of the immune system and specific activity of superoxide dismutase(SOD) were studied in rock bream Oplegnathus fasciatus from fertilization to 50 days after hatching(DAH).The pronephric tubule primordium developed in the embryo,14 h 30 min post fertilization.The spleen anlage was observed between the swim bladder and the intestine at 5 DAH,and the thymus was formed as a paired structure under the pharyngeal epithelium above the gill arch at 10 DAH.The order of the immune organs becoming lymphoid was the pronephric kidney(10 DAH),thymus(15 DAH) and spleen(21 DAH).As the embryo developed,the specific activity of SOD gradually increased until hatching,but subsequently SOD activity continuously decreased to a minimum at 14 DAH.After the spleen became lymphoid,the specific activity of SOD was relatively stable.It is suggested that the immaturity of the lymphoid organs and low specific activity of SOD was the cause of the high mortality of fingerlings 12 to 16 DAH. 相似文献
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通过同源引物从致病性哈维氏弧菌(Vibrio harveyi)ZJ0603基因组中克隆GST的开放阅读框(ORF),构建真核表达质粒pcDNA-GST。大量抽提重组质粒后,于背鳍基部肌肉注射重组质粒免疫斜带石斑鱼(Epinephelus coioides),分析重组质粒的免疫效果。通过核酸水平检测重组质粒在鱼体肝、肌肉、头肾和脾脏组织的分布;用ELISA法检测鱼体血清的抗体水平,用Western-blot检测目的蛋白的表达情况。结果表明:该序列全长615 bp;免疫7 d后,鱼体中均有质粒分布;斜带石斑鱼血清中产生抗GST的高效抗体(1∶4 096);相应的目的蛋白也在鱼体中成功表达。攻毒后,疫苗免疫保护率达80%,表明GST可作为防治哈维氏弧菌病有效候选抗原。 相似文献
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《中国海洋湖沼学报》2021,(2)
It has been reported that there was a linkage of 5 S rRNA gene to 18 S-5.8 S-25 S rRNA gene in a few of species in Ochrophyta.In regard to the usual two positions of linked 5 S rDNA to the 3' end of 25 S rDNA,two pairs of primers were designed for amplification to verify this linkage of two genes in a kelp cultivar of Saccharina japonica,one of species in Ochrophyta.This result supplemented the previous report that 5 S rDNA was unlinked to 25 S rDNA in this kelp.In order to simultaneously visualize this unlinkage of two genes,dual-color fluorescence in situ hybridization(FISH) technique was applied to the cytogenetics of S.japonica.Dual-color FISH images showed that two and four hybridization signals were present in the kelp gametophyte and sporophyte,respectively,metaphase nuclei hybridized simultaneously with the labeled probes of 18 S rDNA and 5 S rDNA.Both haploid and diploid karyotypes in decreasing length of chromosomes showed that 18 S-5.8 S-25 S rDNA was localized at the interstitial region of Chromosome 23,whereas 5 S rDNA resided at the sub-telomeric region of Chromosome 27.These karyotypes suggested that the kelp nuclear genome had only one locus of each rRNA gene,and their loci on different chromosomes indicated the physical unlinkage of 5 S rDNA to 18 S-5.8 S-25 S rDNA in this kelp.Therefore,dual-color FISH seems to be a powerful technique for the discrimination and pairing of chromosomes featured in both small size and nearly identical shape in S.japonica. 相似文献
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We isolated a strain of lymphocystis disease virus (LCDV) from Japanese flounder (Paralichthys olivaceus) cultured in northern China. Based on published sequences of major capsid protein (MCP) gene of LCDV-cn (GenBank: AF126405),
we designed two primer sets P1/P2 and P3/P4. We then used one-step or nested PCR and in-situ hybridization (ISH) to detect
LCDV and identify the target tissues or cells in infected Japanese flounder. The PCR products were positive in purified viral
supernatant, skin nodules, gut, gill, kidney, spleen, stomach, heart, and liver of Japanese flounder. We compared the DNA
sequence with 14 MCP nucleotide sequences from GenBank, including Megalocytivirus (OFIV and RSIV), Iridovirus (CzIV and WIV), Ranavirus (TFV and FV3), and Lymphocystivirus (8 LCDV). Based on the alignment, we confirmed the PCR product was from Lymphocystivirus (GenBank accession number DQ279090 (LCDV-HD)). Using ISH, we noted the presence of LCDV in the skin nodules, gut, gill, spleen,
stomach, and heart of spontaneously infected Japanese flounders. We successfully amplified LCDV fragments from Schlegel’s
black rockfish (Sebastes schlegeli Higendorf), redwing sea robin (Lepidotrigla microptera Günther) and turbot (Scophthalmus maximus) using the one-step and nested PCR, suggesting the target genes can be widely detected in fish using this method. 相似文献
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采用ANAE组化方法(α-醋酸萘酯酶染色法)和ABC免疫组化方法(亲合素-生物素-过氧化物酶复合物法)分析了1龄红笛鲷成鱼的胸腺、头肾和脾脏中IgM+细胞(具有免疫球蛋白分子IgM的细胞)、ANAE+ T细胞的分布。结果表明,三个淋巴器官皆有IgM+细胞、ANAE+ T细胞;胸腺皮质区IgM+细胞数量最多,其次是头肾、胸腺髓质区、脾脏;ANAE+ T细胞以脾脏中数量居多,其次是头肾、胸腺髓质区、胸腺皮质区;ANAE+ T细胞在三个器官中多呈均匀分布,而IgM+细胞在血管、胸腺小体、黑色素巨嗜细胞中心等的外周呈密集分布。实验结果进一步证明了胸腺中的T细胞多为不成熟的T细胞,此外,还含有大量的IgM+细胞;而脾脏、头肾内的ANAE+ T细胞多于胸腺,推测胸腺成熟的T淋巴细胞迁移到头肾和脾脏。 相似文献
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Bacteria-infected turbots Scophthalmus maximus with septicaemia were examined between 2001 and 2004 in aspects of the conditions of disease occurrence, clinical syndromes and pathological changes. The phenotypic information of pathogenic bacteria was studied, including morphology, physiological and biochemical characteristics, and the mol% G C of the DNA. In addition, representative strains (S010623-1, LH031120-1) were selected for molecular identification by partial 16S rRNA gene sequencing. The results show that the isolates (LH031120-1 to LH031120-6, HT040308-1 to HT040308-6, HT040620-1 to HT040620-6) from three farms were identified as Edwardsiella tarda. The isolates (S010610-1 to S010610-10, S010623-1 to S010623-20) from one farm were identified as Listonella anguillarum. We conducted studies on the pathogenicity of isolates by artificial infection, and revealed all infected groups in morbidity and mortality. The septicaemia infected turbot showed a syndrome similar to that of the naturally infected fish. Antibiotic sensitivity showed that of 37 antimicrobial agents, E. tarda was sensitive to 27 agents, and L. anguillarum was sensitive to 21 agents. 相似文献