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1.
The spatial moments of a contaminant plume undergoing bio-attenuation are coupled to the moments of microbial populations effecting that attenuation. In this paper, a scalable inverse method is developed for estimating field-scale Monod parameters such as the maximum microbial growth rate (μmax), the contaminant half saturation coefficient (Ks), and the contaminant yield coefficient (Ys). The method uses spatial moments that characterize the distribution of dissolved contaminant and active microbial biomass in the aquifer. A finite element model is used to generate hypothetical field-scale data to test the method under both homogeneous and heterogeneous aquifer conditions. Two general cases are examined. In the first, Monod parameters are estimated where it is assumed a microbial population comprised of a single bacterial species is attenuating one contaminant (e.g., an electron donor and an electron acceptor). In a second case, contaminant attenuation is attributed to a microbial consortium comprised of two microbial species, and Monod parameters for both species are estimated. Results indicate the inverse method is only slightly sensitive to aquifer heterogeneity and that estimation errors decrease as the sampling time interval decreases with respect to the groundwater travel time between sample locations. Optimum conditions for applying the scalable inverse method in both space and time are investigated under both homogeneous and heterogeneous aquifer conditions.  相似文献   

2.
The passive flux meter (PFM) is a permeable down-hole device designed to measure the magnitudes of horizontal groundwater specific discharge and contaminant mass flux in porous media. By means of a geometrical analysis of resident tracer transport inside a PFM, this paper introduces two new PFM designs capable of measuring both the direction and magnitude of horizontal water and contaminant fluxes. One design relies on the detection of a single resident tracer over multiple domains within the PFM cross section to determine the magnitude and direction of water flux. The second PFM configuration uses the detected loss of multiple resident tracers in different sectors of the PFM cross section to generate the same characterization of water flux. Both designs rely on the assumption of linear, instantaneous and reversible tracer sorption.  相似文献   

3.
A coastal risk assessment system simulates the basic physical mechanisms underlying contaminant transport in Tampa Bay. This risk assessment system, comprised of a three-dimensional numerical circulation model coupled to a Lagrangian particle tracking model, simulates the transport and dispersion of a toxic dinoflagellate bloom. Instantaneous velocity output from the circulation model drives the movement of particles, each representing a fraction of a K. brevis bloom, within the model grid cells. Hindcast simulations of the spatial distribution of the K. brevis bloom are presented and compared with water sample concentrations collected during the peak of the bloom. Probability calculations, herein called transport quotients, allow for rapid analysis of bay-wide K. brevis transport showing locations most likely to be impacted by the contaminant. Maps constructed from the transport quotients provide managers with a bay-wide snapshot of areas in Tampa Bay most at risk during a hazardous bloom event.  相似文献   

4.
A finite element 2D Monte Carlo approach is used to evaluate the sensitivity of groundwater contaminant discharges to a Damkohler number ω and spatial variability in aquifer hydraulic conductivity, initial microbial biomass concentrations, and electron acceptor/donor concentrations. Bioattenuation is most sensitive to spatial variations in incipient biomass and critical electron donors/acceptors for ω ≥ 1 (i.e., when pore-water residence times are high compared to the time needed for microbial growth or contaminant attenuation). Under these conditions, critical reaction processes can become substrate-limited at multiple locations throughout the aquifer; which in turn increases expected contaminant discharges and their uncertainties at monitored transects. For ω ≤ 0.2, contaminant discharge is not sensitive to incipient biomass variations. Physical heterogeneities expedite plume arrival and delay departure at transects and in turn attenuate peak discharges but do not affect cumulative contaminant discharges. Physical heterogeneities do, however, induce transect mass discharge variances that are bimodal functions of time; the first peak beings consistently higher. A simple stream tube model is invoked to explain the occurrence of peaks in contaminant discharge variance.  相似文献   

5.
The development of accurate predictive models of toxic dinoflagellate blooms is of great ecological importance, particularly in regions that are most susceptible to their detrimental effects. This is especially true along the west Florida shelf (WFS) and coast, where episodic bloom events of the toxic dinoflagellate Karenia brevis often wreak havoc on the valuable commercial fisheries and tourism industries of west Florida. In an effort to explain the dynamics at work within the maintenance and termination phases of a red tide, a simple three-dimensional coupled biophysical model was used in the analysis of the October 1999 red tide offshore Sarasota, Florida. Results of the numerical experiments indicate that: (1) measured and modeled flowfields were capable of transporting the observed offshore inoculum of K. brevis to within 16 km of the coastal boundary; (2) background concentrations (1000 cells L−1) of K. brevis could grow to a red tide of over 2×106 cells L−1 in little more than a month, assuming an estuarine initiation site with negligible offshore advection, no grazing losses, negligible competition from other phytoplankton groups, and no nutrient limitation; (3) maximal grazing pressure could not prevent the initiation of a red tide or cause its termination, assuming no other losses to algal biomass and a zooplankton community ingestion rate similar to that of Acartia tonsa; and (4) the light-cued ascent behavior of K. brevis served as an aggregational mechanism, concentrating K. brevis at the 55 μE m−2 s−1 isolume when mean concentrations of K. brevis exceeded 100,000 cells L−1. Further improvements in model fidelity will be accomplished by the future inclusion of phytoplankton competitors, disparate nutrient availability and limitation schemes, a more realistic rendering of the spectral light field and the attendant effects of photo-inhibition and compensation, and a mixed community of vertically-migrating proto- and metazoan grazers. These model refinements are currently under development and shall be used to aid progress toward an operational model of red tide forecasting along the WFS.  相似文献   

6.
Lead (Pb) isotope ratios were measured in the marine macroalga Iridaea cordata collected from four locations in the Windmill Islands, East Antarctica. Based on the masses of thalli collected, samples analysed in this study were likely to be a mixture of one and two year old thalli. For a sample of thalli of various ages (<12 months to 2 years old) from the same site there was no apparent variation in Pb concentration or Pb isotope ratio with thallus mass/age, indicating that contaminant sources had been constant over the lifetime of the thalli sampled. I.cordata samples close to the Thala Valley waste disposal site (Brown Bay Inner) near the Australian Station, Casey, displayed isotopic signatures (208Pb/204Pb 35.99; 206Pb/207Pb 1.066; n = 3; average values shown) trending towards that possessed by major Australian Pb sources (Broken Hill and Mt Isa, 208Pb/204Pb 35.60; 206Pb/207Pb 1.041) suggesting that these samples had been exposed to anthropogenic Pb originating from the Thala Valley waste disposal site. Material collected hundreds of metres from the tip location at Brown Bay Outer had isotopic values (208Pb/204Pb 36.32; 206Pb/207Pb 1.088; n = 10) intermediate between Brown Bay Inner and sites further from the contaminant source at Sparkes Bay and Wilkes (208Pb/204Pb 36.46; 206Pb/207Pb 1.094; n = 4) showing that contaminant transport was predominantly restricted to Brown Bay Inner. This study demonstrates that the isotope ratios of Pb in marine macroalgae can provide valuable information as to the origin and extent of heavy metal flux in a marine environment.  相似文献   

7.
The solution of second order elliptic partial differential equations typically arising for flow problems, e.g., in porous media, is frequently expressed as face fluxes of a flow field at hexahedral cells. In this letter, we show by example that the following properties are incompatible: (1) A local velocity reconstruction, (2) reproduction of uniform flow for general hexahedral cells, and (3) a flow field in H(div). This is in particular relevant to mixed finite element methods approximating H(div), and to other methods trying to reconstruct a flow field in a hexahedron using only local face fluxes, e.g., streamline tracing methods for reservoir simulation.  相似文献   

8.
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9.
Patterns of septal insertion were analyzed in three species of Agetolites from the Upper Ordovician in Yushan County,Jiangxi Province of China.Agetolites is a peculiar coral possessing features of both tabulate(e.g.,mural pores)and rugose corals(e.g.,well-developed septa).Septal patterns have long been considered to be indicative of the origin of corals,and the pattern of septal insertion in Agetolites has been known to be typical of rugosans.This study,however,reveals that the patterns in Agetolites are rather random and cannot be an indication of its rugosan affinity.It is suggested that Agetolites probably has a closer phylogenetic relation with tabulates than with either rugosans or scleractinians.Two insertion patterns of the first six septa were detected(Types Ⅰ and Ⅱ).Type I is interpreted as scleractinian pattern whereas Type II as typical pattern of rugosans.Types 1 and 2 are septal patterns of the second stage recognized in this study.Type 1 insertion occurs in six sectors located in the center of each interseptal space,suggesting scleractinian pattern of insertion.Type 2 insertion occurs in four sectors that are comparable with alar and counter sectors in rugose corals.Four patterns of the third(Types A–D)and fourth stages(Types a–d)of septal insertion have also been recognized in Agetolites.Type A only occurs in two adjacent sectors possibly due to the incompleteness of septal development.Type B presents rugosan pattern.Types C and D resemble scleractinian pattern in most aspects.Types a,b,and c present no clear attribution to rugosan or scleractinian pattern probably due to the incompleteness of septal development whereas Type d is observable in rugose corals.  相似文献   

10.
Piecewise heterogeneous media that the earth presents are composed of large-scale boundary structures and small-scale volume heterogeneities. Wave propagation in such piecewise heterogeneous media can be accurately superposed through the generalized Lippmann–Schwinger integral equation (GLSIE). Two different Born series modeling schemes are formulated for the boundary–volume integral equation with 2-D antiplane motion (SH waves). Both schemes decompose the resulting boundary–volume integral equation matrix into two parts: the self-interaction operator handled with a fully implicit manner, and the extrapolation operator approximated by a Born series. The first scheme associates the self-interaction operator with each boundary itself and the volume itself, and interprets the extrapolation operator as the cross-interaction between each boundary and other boundaries/volume scatterers in a subregion. The second scheme relates the self-interaction operator to each boundary itself and its cross-interaction with the volume scatterers on both sides, and expresses the extrapolation operator as both the direct and indirect (through the volume scatterers) cross-interactions between different boundaries in a subregion. By eliminating the displacement field from the volume scatterers, the second scheme reduces the dimension of the resulting boundary-volume integral equation matrix, leading to a faster convergence than the first scheme. Both the numerical schemes are validated by dimensionless frequency responses to a heterogeneous alluvial valley with the velocity perturbed randomly in the range of ca 5–20 %. The schemes are applied to wave propagation simulation in a heterogeneous multilayered model by calculating synthetic seismograms. Numerical experiments, compared with the full-waveform numerical solution, indicate that the Born series modeling schemes significantly improve computational efficiency, especially for high frequencies.  相似文献   

11.
Mud crabs, Scylla serrata, were sampled from four estuaries (the Normanby, Herbert, Burdekin and Fitzroy Rivers) along the coast of northern Queensland, Australia, representing a pollution gradient from low to high contamination based upon previous chemical monitoring. Four biomarkers; glutathione-S-transferase (GST) activity, cholinesterase (ChE) inhibition and the urinary metabolite concentrations of naphthalene (NPH) and benzo-a-pyrene (BaP) were evaluated in S. serrata hepatopancreas, haemolymph and urine. Site-specific evidence of elevated GST activity and BaP metabolite concentrations and significant ChE inhibition was detected. Biomarker responses from this field study provide evidence of contaminant exposure of S. serrata from river estuaries along the coast of northern Queensland and indicate that further investigation is warranted. Based on the current results, and with further work on characterising the dose-response and seasonal variation in this species, mud crabs have great potential as indicator species for water quality and ecosystem monitoring programs across tropical coastal regions of Australia.  相似文献   

12.
Genome resources have advantages for understanding diverse areas such as biological patterns and functioning of organisms. Omics platforms are useful approaches for the study of organs and organisms. These approaches can be powerful screening tools for whole genome, proteome, and metabolome profiling, and can be used to understand molecular changes in response to internal and external stimuli. This methodology has been applied successfully in freshwater model fish such as the zebrafish Danio rerio and the Japanese medaka Oryzias latipes in research areas such as basic physiology, developmental biology, genetics, and environmental biology. However, information is still scarce about model fish that inhabit brackish water or seawater. To develop the self-fertilizing killifish Kryptolebias marmoratus as a potential model species with unique characteristics and research merits, we obtained genomic information about K. marmoratus. We address ways to use these data for genome-based molecular mechanistic studies. We review the current state of genome information on K. marmoratus to initiate omics approaches. We evaluate the potential applications of integrated omics platforms for future studies in environmental science, developmental biology, and biomedical research. We conclude that information about the K. marmoratus genome will provide a better understanding of the molecular functions of genes, proteins, and metabolites that are involved in the biological functions of this species. Omics platforms, particularly combined technologies that make effective use of bioinformatics, will provide powerful tools for hypothesis-driven investigations and discovery-driven discussions on diverse aspects of this species and on fish and vertebrates in general.  相似文献   

13.
This paper examines the potential of the adaptive hp-FEM method for the numerical solution of time-dependent variably saturated Darcian flow problems described by the Richards equation. The method is illustrated on three model problems: a benchmark with known exact solution, groundwater seepage into a dry lysimeter box with time-dependent boundary conditions, and capillary barrier behavior under an intense infiltration. In the second part of the paper we present the weak formulation of the Richards equation for the Newton’s and Picard’s methods, give a brief overview of adaptive hp-FEM with emphasis on aspects that are usually not discussed in the literature, and we briefly introduce the open source adaptive hp-FEM library HERMES that was used to generate numerical results for this paper. All computations that we present are easily reproducible.  相似文献   

14.
We investigated the effects of elevated pCO2 in seawater both on the acute mortality and the reproductive properties of the benthic copepod Tigriopus japonicus and gastropod Babylonia japonica with the purpose of accumulating basic data for assessing potential environmental impacts of sub-sea geological storage of anthropogenic CO2 in Japan. Acute tests showed that nauplii of T. japonicus have a high tolerance to elevated pCO2 environments. Full life cycle tests on T. japonicus indicated NOEC = 5800 μatm and LOEC = 37,000 μatm. Adult B. japonica showed remarkable resistance to elevated pCO2 in the acute tests. Embryonic development of B. japonica showed a NOEC = 1500 μatm and LOEC = 5400 μatm. T. japonicus showed high resistance to elevated pCO2 throughout the life cycle and B. japonica are rather sensitive during the veliger stage when they started to form their shells.  相似文献   

15.
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16.
Single grain OSL has become a widely used approach in Quaternary geochronology. However, the origins of De distributions and the sources of variation in individual dose estimates are still poorly understood. The amount of scatter in these distributions on top of the known uncertainties in measurement and analysis is defined by overdispersion and this quantity is generally used for weighting individual De values to calculate a central equivalent dose. In this study, we address the nature and amount of different sources of dispersion in quartz single grain De estimates, by (i) using appropriate statistical tools to characterize De populations and (ii) modelling, with a specifically designed Geant4 code, dose rate distributions arising from the presence of potassium feldspar grains in well-sorted sands. The model uses Monte Carlo simulations of beta emissions and interactions in a random close packing of quartz and feldspar spheres representing a sand sample. Based on the simulation results, we explain the discrepancy between intrinsic and natural overdispersion values in a well-bleached sample, thus validating the model. The three parameters having the most influence on dispersion in dose rate distributions, and modelled in this study, appear to be grain size, potassium content and total dose rate.Finally an analysis of measurement uncertainties and other sources of variations in equivalent dose estimates lead us to conclude that all age models (both logged and unlogged) which include an overdispersion value to weight individual De values rely mainly on unknown parameters; this ignorance may lead to an inadvertent bias in De estimates. Assuming counting statistics make a small contribution to dispersion (as is often the case), we suggest that in some cases it is most appropriate to use unweighted averages of equivalent doses when dividing by commonly measured average dose rates.  相似文献   

17.
The prediction of contaminant transport in porous media requires the computation of the flow velocity. This work presents a methodology for high-accuracy computation of flow in a heterogeneous isotropic formation, employing a dual-flow formulation and adaptive gridding. The dual equations, describing the hydraulic head and the streamfunction, are numerically solved through finite element approximations. The application of classic finite-element methods requires a rather large number of nodes to represent suitably the flow in high-contrast formations. We present a mesh-adaptive approach that enhances the accuracy of the numerical flow solution for a given computational effort. We rely on an a posteriori error estimator to identify areas where refinements of the finite element mesh are needed or unrefinements are acceptable. We also demonstrate through numerical experiments that the developed methodology efficiently enhances accuracy through successive mesh adaptation.  相似文献   

18.
Pterois volitans and Pterois miles, two sub-species of lionfish, have become the first non-native, invasive marine fish established along the United States Atlantic coast and Caribbean. The route and timing of the invasion is poorly understood, however historical sightings and captures have been robustly documented since their introduction. Herein we analyze these records based on spatial location, dates of arrival, and prevailing physical factors at the capture sights. Using a cellular automata model, we examine the relationship between depth, salinity, temperature, and current, finding the latter as the most influential parameter for transport of lionfish to new areas. The model output is a synthetic validated reproduction of the lionfish invasion, upon which predictive simulations in other locations can be based. This predictive model is simple, highly adaptable, relies entirely on publicly available data, and is applicable to other species.  相似文献   

19.
We show that it is possible to estimate the background velocity for prestack depth migration in 2D laterally varying media using a non-linear optimization technique called very fast simulated annealing (VFSA). We use cubic splines in the velocity model parametrization and make use of either successive pairs of shot gathers or several constant-offset sections as input data for the inversion. A Kirchhoff summation scheme based on first-arrival traveltimes is used to migrate/model the input data during the velocity analysis. We evaluate and compare two different measures of error. The first is defined in the recorded data or (x,t) domain and is based on a reflection-tomography criterion. The second is defined in the migrated data or (x,z) domain and is based on a migration-misfit criterion. Depth relaxation is used to improve the convergence and quality of the velocity analysis while simultaneously reducing the computational cost. Further, we show that by coarse sampling in the offset domain the method is still robust. Our non-linear optimization approach to migration velocity analysis is evaluated for both synthetic and real seismic data. For the velocity-analysis method based on the reflection-tomography criterion, traveltimes do not have to be picked. Similarly, the migration-misfit criterion does not require that depth images be manually compared. Interpreter intervention is required only to restrict the search space used in the velocity-analysis problem. Extension of the proposed schemes to 3D models is straightforward but practical only for the fastest available computers.  相似文献   

20.
The current paper deals with the evaluation of the BANCS erosion prediction model and its two componentsethe Bank Erosion Hazard Index(BEHI)and Near-Bank Stress(NBS)indices.To construct the erosion prediction curves,18 experimental sections were established on the Kubrica Stream,district of Trencín,Slovakia.Each section was assessed through the NBS index and BEHI index and real annual bank erosion was measured using erosion toe pins.Subsequently,the relations between the BEHI and real annual bank erosion was assessed through regression and correlation analyses.The relation proved to be moderately strong,with the correlation coefficient(R)reaching 0.47.Further,the relation between the NBS index and real annual bank erosion was evaluated,which was also moderately strong,with R=0.65.Based on the measured data,two erosion prediction curves were constructed,the first for moderate BEHI,with R=0.69 and coefficient of determination(R2)of 0.47 and the second for high BEHI with R=0.74 and R2=0.55.The prediction curves were based on data from one year of measurements and can,therefore,be used only for discharges that occurred within that year and in the region where the model was developed.In the current case,according to runoff Curve Numbers(CN),the real culmination discharge was Q=1.88 m3/s,which is roughly equivalent to 1.5-year recurrence interval flow(Q1.5).  相似文献   

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