Investigating the molecular systematic relationships amongst selected Plesionika (Decapoda: Pandalidae) from the Northeast Atlantic and Mediterranean Sea     

Joana M da Silva  Antonina dos Santos  Marina R Cunha  Filipe O Costa  Simon Creer  Gary R Carvalho 《Marine Ecology》2013,34(2):157-170

Despite the high number of species and ecological diversity of pandalid shrimps, there has been no previous attempt to resolve evolutionary relationships of several genera using molecular tools. Although mitochondrial DNA cytochrome oxidase I (COI) is widely used in barcoding studies to delimit species boundaries, additional insights into phylogenetic affinities can be obtained, especially when used in combination with data from additional genes. The knowledge of molecular diversity is essential to understand phylogenetic relationships and will help systematic clarifications. Based on partial fragments of the 16S and COI genes, we have focused specifically on addressing the systematic relationships of the economically and ecologically important shrimp genus Plesionika within a framework of five genera from within the Pandalidae. Our results showed that species within Plesionika are substantially divergent when compared with other genera, exhibiting the highest average nucleotide divergence, with 0.1123 and 0.0846 in COI and 16S genes, respectively. In addition, sequence divergence was found to vary greatly within the genus Plesionika (COI/16S): 0.0247/0.0016 between Plesionika antigai and Plesionika heterocarpus and 0.1616/0.098 between Plesionika heterocarpus and Plesionika edwardsii. We did not find amino acid sequence divergence between P. heterocarpus and P. antigai compared with P. heterocarpus and P. edwardsii (8.10%, K2P distance). Three species of Plesionika (P. antigai, P. heterocarpus and Plesionika scopifera) appear well separated from other Plesionika species in both maximum likelihood and Bayesian analyses. The present study confirms the utility of COI over 16S as a genetic marker to resolve relationships between different species of Plesionika from the Northeast Atlantic and Mediterranean Sea, in addition to species delimitation. The findings highlight the need to further review paraphyly within Plesionika in an attempt to recognize a concordance in the evolutionary history of Plesionika with major ecological and geological events.  相似文献   

Ecological quality assessment of small estuaries from the Portuguese coast based on benthic macroinvertebrate assemblages indices   总被引：1，自引：0，他引：1  

Cardoso I  Cancela da Fonseca L  Cabral HN 《Marine pollution bulletin》2012,64(6):1136-1142

Benthic macroinvertebrates communities are the most consistently emphasized biotic component of aquatic ecosystems and are one of the biological indicators required for assessment by the European Water Framework Directive. In this context, several indices based on these communities have been developed in order to assess ecological quality of estuarine systems. In the present work we used AMBI, M-AMBI, BENTIX and BAT to distinguish ecological status of five small estuarine systems of the Portuguese south and southwest coasts. Although indices outputs did not differ between systems and sampling seasons, results indicated that the metrics in which these indices are based could differentiate community structures as a result of two main gradients that force these communities: the natural variability, and the anthropogenic impact.  相似文献   

Analysis of the Characteristics of Low-Latitude GPS Amplitude Scintillation Measured During Solar Maximum Conditions and Implications for Receiver Performance   总被引：1，自引：0，他引：1  

Alison de Oliveira Moraes  Fabiano da Silveira Rodrigues  Waldecir Jo?o Perrella  Eurico Rodrigues de Paula 《Surveys in Geophysics》2012,33(5):1107-1131

Ionospheric scintillations are fluctuations in the phase and/or amplitude of trans-ionospheric radio signals caused by electron density irregularities in the ionosphere. A better understanding of the scintillation pattern is important to make a better assessment of GPS receiver performance, for instance. Additionally, scintillation can be used as a tool for remote sensing of ionospheric irregularities. Therefore, the study of ionospheric scintillation has both scientific as well as technological implications. In the past few years, there has been a significant advance in the methods for analysis of scintillation and in our understanding of the impact of scintillation on GPS receiver performance. In this work, we revisit some of the existing methods of analysis of scintillation, propose an alternative approach, and apply these techniques in a comprehensive study of the characteristics of amplitude scintillation. This comprehensive study made use of 32?days of high-rate (50?Hz) measurements made by a GPS-based scintillation monitor located in S?o José dos Campos, Brazil (23.2°S, 45.9°W, ?17.5° dip latitude) near the Equatorial Anomaly during high solar flux conditions. The variability of the decorrelation time (τ₀) of scintillation patterns is presented as a function of scintillation severity index (S ₄). We found that the values of τ₀ tend to decrease with the increase of S ₄, confirming the results of previous studies. In addition, we found that, at least for the measurements made during this campaign, averaged values of τ₀ (for fixed S ₄ index values) did not vary much as a function of local time. Our results also indicate a significant impact of τ₀ in the GPS carrier loop performance for S ₄?≥?0.7. An alternative way to compute the probability of cycle slip that takes into account the fading duration time is also presented. The results of this approach show a 38% probability of cycle slips during strong scintillation scenarios (S ₄ close to 1 and τ₀ near 0.2?s). Finally, we present results of an analysis of the individual amplitude fades observed in our set of measurements. This analysis suggests that users operating GPS receivers with C/N ₀ thresholds around 30?dB-Hz and above can be affected significantly by low-latitude scintillation.  相似文献   

Performance of masonry enclosure walls: lessons learned from recent earthquakes   总被引：3，自引：1，他引：2  

Romeu Silva Vicente  Hugo Rodrigues  Humberto Varum  Aníbal Costa  Jos António Raimundo Mendes da Silva 《地震工程与工程振动(英文版)》2012,11(1):23-34

This paper discusses the issue of performance requirements and construction criteria for masonry enclosure and infill walls.Vertical building enclosures in European countries are very often constituted by non-load-bearing masonry walls, using horizontally perforated clay bricks.These walls are generally supported and confined by a reinforced concrete frame structure of columns and beams/slabs.Since these walls are commonly considered to be nonstructural elements and their influence on the structural response is ignored,their consideration in the design of structures as well as their connection to the adjacent structural elements is frequently negligent or insufficiently detailed.As a consequence,nonstructural elements,as for wall enclosures,are relatively sensitive to drift and acceleration demands when buildings are subjected to seismic actions. Many international standards and technical documents stress the need for design acceptability criteria for nonstructural elements,however they do not specifically indicate how to prevent collapse and severe cracking,and how to enhance the overall stability in the case of moderate to high seismic loading.Furthermore,a review of appropriate measures to improve enclosure wall performance and both in-plane and out-of-plane integrity under seismic actions is addressed.  相似文献   

Shaking table tests on a full-scale unreinforced and IMG-retrofitted clay brick masonry barrel vault     

V.?Giamundo  G.?P.?LignolaEmail author  G.?Maddaloni  F.?da Porto  A.?Prota  G.?Manfredi 《Bulletin of Earthquake Engineering》2016,14(6):1663-1693

The recent earthquakes in Italy demonstrated the extreme vulnerability of historical and cultural structures. Masonry vaults, which represent artistically valuable elements of these constructions, have been recognised among the most vulnerable elements. Traditional vault retrofit methods, such as buttresses or ties, are still widely adopted. These retrofit methods prevent differential displacements between vault supports (e.g., abutments, masonry piers and loadbearing walls). However, the pier differential displacement is not the only vulnerability source for vaults, and in many cases, further retrofit interventions are needed. Innovative retrofit methods based on inorganic matrixes, such as IMG, are aimed to prevent hinge mechanism failures. Such methods are suitable to be applied on vaults already retrofitted using traditional methods. The knowledge of the seismic behaviour of a vault, once the differential displacement between the supports is prevented, can be crucial to the assessment of potential further vulnerabilities of vaults already retrofitted with traditional methods. However, a deep knowledge of vault seismic behaviour is still lacking from an experimental point of view. Indeed, to date, few dynamic experimental studies have been conducted. Therefore, to investigate the seismic behaviour of masonry barrel vaults, several shaking table tests were performed on a full-scale specimen before and after the retrofit interventions. The tests investigated the main seismic properties of the tested structure and clarified the cracking mechanisms and capacity improvement due to the retrofit interventions. A comprehensive overview of the main results of the experimental tests has been presented.  相似文献   

Seismic fragility curves of as-built single-span masonry arch bridges     

Giovanni Tecchio  Marco Donà  Francesca da Porto 《Bulletin of Earthquake Engineering》2016,14(11):3099-3124

Masonry arch bridges are crucial elements in the railway transportation network throughout Europe. Although significant advances in seismic risk assessment of various bridge types have been made by developing fragility curves of generalized classes of structures, there are no comparable tools for masonry arch structures. In this context, this paper presents the construction of seismic fragility curves of single-span masonry bridges according to the limit analysis method. An iterative procedure is implemented to define the capacity curve of the equivalent single degree of freedom system through non-linear kinematic analysis. The process involves determination of the collapse mechanism, calculation of the limit load multiplier, and definition of the thrust line. The intrinsic variability of the seismic action is incorporated with the use of different sets of elastic spectra compatible with EC 8 Type-1 spectrum for various types of soil, with peak ground acceleration varying over the range 0.05–1.5 g. The fragility curves of the generalized classes of single-span masonry bridges are finally obtained from the effective ranges of the main geometric and material parameters affecting arch bridge capacity.  相似文献   

Optimal pumping from Palmela water supply wells (Portugal) using simulated annealing   总被引：1，自引：0，他引：1  

Teresa Fragoso  Maria da Conceição Cunha  João P. Lobo-Ferreira 《Hydrogeology Journal》2009,17(8):1935-1948

Aquifer systems are an important part of an integrated water resources management plan as foreseen in the European Union’s Water Framework Directive (2000). The sustainable development of these systems demands the use of all available techniques capable of handling the multidisciplinary features of the problems involved. The formulation and resolution of an optimization model is described for a planning and management problem based on the Palmela aquifer (Portugal), developed to supply a given number of demand centres. This problem is solved using one of the latest optimization techniques, the simulated annealing heuristic method, designed to find the optimal solutions while avoiding falling into local optimums. The solution obtained, providing the wells location and the corresponding pumped flows to supply each centre, are analysed taking into account the objective function components and the constraints. It was found that the operation cost is the biggest share of the final cost, and the choice of wells is greatly affected by this fact. Another conclusion is that the solution takes advantage of the economies of scale, that is, it points toward drilling a large capacity well even if this increases the investment cost, rather than drilling several wells, which together will increase the operation costs.  相似文献   

Low Visibility Formation and Forecasting on the Northern Coast of Brazil   总被引：1，自引：0，他引：1  

Natalia Fedorova  Vladimir Levit  Aliton Oliveira da Silva  Deydila Michele Bonfim dos Santos 《Pure and Applied Geophysics》2013,170(4):689-709

Visibility analysis and forecast at the Maceio International Airport in the Brazilian Northeast (NEB) was the principal goal of this investigation. Surface meteorological data of the Maceio International Airport were used for low visibility frequency study. Low visibility in NEB was provoked more frequently by light fog (LF) formation (1,098 or 92 h month^?1 on average). Haze and fog were very rare (81 h and one event per year, respectively on average). Light fog with a visibility less than 2 km usually was detected together with rain or drizzle. Low visibility was observed more frequently at night and during the rainy season. Applications of the Hybrid Single Particle Lagrangian Integrated Trajectory (HYSPLIT) model for light fog forecast were tested. Thermodynamic processes were studied by vertical profile, elaborated by: (1) National Centers for Environmental Prediction (NCEP) reanalysis data for Maceio (because of some radiosonde absence) and (2) forecast vertical temperature and humidity profiles were produced, using Air Parcels Trajectories of the HYSPLIT model at the pattern levels. The synoptic situations before and during low visibility phenomena were analyzed using different products of NCEP reanalysis, the high resolution (10 km) ETA model and infrared satellite images. Wave disturbance in the trade winds field, localized on the northwest periphery of the South Atlantic subtropical High, usually accompanied the phenomena. A humidity advection, weak ascendant movement and thermal inversion absence at the low levels were created by these waves. The middle level’s descendent movement provoked the humidity accumulation at levels below. Satisfactory results of the HYSPLIT model applications for light fog forecast were obtained with 12 h antecedence. In particular, stable level forecast by the ETA model was forecast satisfactorily with 12 h antecedence; vertical movements were predicted better with up to 48 h antecedence. The PSU/NCAR mesoscale model (MM5) and PAFOG models were tested for analysis and forecast of an intensive fog event. Intensive fog provoked a fatal accident of a small airplane near the Maceio Airport in 2007. These fog formation processes were studied by NCEP reanalysis data, the high resolution regional model MM5, and satellite and radar data. Fog formation was simulated by PAFOG model and satisfactory results were obtained with 10 h antecedence.  相似文献   

Corrigendum to “Survival and movements of Magellanic penguins rehabilitated from oil fouling along the coast of South America, 2000–2010” [Marine Pollut. Bull. 64 (2012) 1309–1317]     

Valeria Ruoppolo  Ralph Eric Thijl Vanstreels  Eric J. Woehler  Sergio Andres Rodríguez Heredia  Andréa Corrado Adornes  Rodolfo Pinho da Silva-Filho  Ricardo Matus  Carla Poleschi  Karen Griot  Cristiane K. Miyaji Kolesnikovas  Patrícia Serafini 《Marine pollution bulletin》2013,66(1-2):265

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Environmental changes in southeastern Amazonia during the last 25,000 yr revealed from a paleoecological record     

Barbara Hermanowski  Marcondes Lima da Costa  Hermann Behling 《Quaternary Research》2012,77(1):138-148

New pollen, micro-charcoal, sediment and mineral analyses of a radiocarbon-dated sediment core from the Serra Sul dos Carajás (southeast Amazonia) indicate changes between drier and wetter climatic conditions during the past 25,000 yr, reflected by fire events, expansion of savanna vegetation and no-analog Amazonian forest communities. A cool and dry last glacial maximum (LGM) and late glacial were followed by a wet phase in the early Holocene lasting for ca. 1200 yr, when tropical forest occurred under stable humid conditions. Subsequently, an increasingly warm, seasonal climate established. The onset of seasonality falls within the early Holocene warm period, with possibly longer dry seasons from 10,200 to 3400 cal yr BP, and an explicitly drier phase from 9000 to 3700 cal yr BP. Modern conditions with shorter dry seasons became established after 3400 cal yr BP. Taken together with paleoenvironmental evidence from elsewhere in the Amazon Basin, the observed changes in late Pleistocene and Holocene vegetation in the Serra Sul dos Carajás likely reflect large-scale shifts in precipitation patterns driven by the latitudinal displacement of the Inter-Tropical Convergence Zone and changes in sea-surface temperatures in the tropical Atlantic.  相似文献