毛乌素沙地锦鸡儿（Caragana）根系微域细菌群落多样性特征     

周子渊  于明含  丁国栋  高广磊  何莹莹 《中国沙漠》2020,40(4):128-137

基于16S rRNA高通量基因测序技术，对毛乌素沙地小叶锦鸡儿（Caragana microphylla)、柠条锦鸡儿（Caragana korshinskii）根系微域（即根系、根际土、根区土、灌丛间空白土）间的细菌群落多样性和结构差异性进行表征。本研究对各根系微域间细菌群落的Alpha多样性指数进行了单因素方差分析以及基于OTU水平的PCA分析，探究其在根系微域间Alpha和Beta多样性的层级变化，证实了有关植物根系微域生态位分化的报道，并发现锦鸡儿属植物根系微域间细菌群落的多样性和结构组成随着4个微域类型由外及内呈现出显著的层级差异性（P<0.05）。通过对优势细菌群组的结构组成分析，发现锦鸡儿属植物对特定细菌群组具有显著的向根系内筛选富集的作用（P<0.05）。这种植物通过根系微域对特定细菌群组的逐级筛选富集作用，是导致锦鸡儿属植物灌丛下不同生态位间细菌群落结构和组成发生层级变异的主要原因。  相似文献   

Salinivibrio sp.YH4胞外丝氨酸蛋白酶EYHS耐盐性及生物信息学分析          下载免费PDF全文

武翠玲  宋英达  高慧芳  张廉芸  任晨霞 《盐湖研究》2020,28(1)

摘要：目的 探讨菌株Salinivibrio sp.YH4分泌的丝氨酸蛋白酶EYHS的耐盐性及结构特征。方法 明胶底物酶谱法分析EYHS的耐盐性。应用生物信息学手段对EYHS及6种耐盐的S8家族丝氨酸蛋白酶结构特征进行分析。结果 EYHS在4 mol/L的NaCl溶液中仍具有活性，属于耐盐蛋白酶。EYHS及6种S8家族丝氨酸蛋白酶分子表面的loop区等无规则卷曲所占比例较高，α-螺旋与β-片层则主要位于酶分子内部。EYHS分子表面酸性氨基酸含量较高，且具有弱疏水内核。多序列比对发现蛋白酶的催化三联体两侧存在高度保守的基序和保守的极性氨基酸及芳香族氨基酸，并存在多个保守的Gly与Ala。同源模建和表面电荷分布显示，α螺旋和β片层围成了蛋白酶的催化腔，EYHS活性中心包含由Asp32、His65与Ser215组成的催化三联体，且催化位点区域表面静电势为负。结论 上述结构特征可能有助于耐盐丝氨酸蛋白酶EYHS在高盐环境下维持其稳定性和适度柔性，并有助于其催化功能的发挥，为深入研究耐盐丝氨酸蛋白酶的高盐环境适应性提供了一定的理论依据。  相似文献   

A machine learning approach for predicting computational intensity and domain decomposition in parallel geoprocessing     

Peng Yue  Fan Gao  Boyi Shangguan  Zheren Yan 《International journal of geographical information science》2020,34(11):2243-2274

ABSTRACT

High performance computing is required for fast geoprocessing of geospatial big data. Using spatial domains to represent computational intensity (CIT) and domain decomposition for parallelism are prominent strategies when designing parallel geoprocessing applications. Traditional domain decomposition is limited in evaluating the computational intensity, which often results in load imbalance and poor parallel performance. From the data science perspective, machine learning from Artificial Intelligence (AI) shows promise for better CIT evaluation. This paper proposes a machine learning approach for predicting computational intensity, followed by an optimized domain decomposition, which divides the spatial domain into balanced subdivisions based on the predicted CIT to achieve better parallel performance. The approach provides a reference framework on how various machine learning methods including feature selection and model training can be used in predicting computational intensity and optimizing parallel geoprocessing against different cases. Some comparative experiments between the approach and traditional methods were performed using the two cases, DEM generation from point clouds and spatial intersection on vector data. The results not only demonstrate the advantage of the approach, but also provide hints on how traditional GIS computation can be improved by the AI machine learning.  相似文献   

Coupling numerical simulation with remotely sensed information for the study of frozen soil dynamics     

HuiRan Gao  WanChang Zhang 《寒旱区科学》2020,12(6):404-417

The acquisition of spatial-temporal information of frozen soil is fundamental for the study of frozen soil dynamics and its feedback to climate change in cold regions. With advancement of remote sensing and better understanding of frozen soil dynamics, discrimination of freeze and thaw status of surface soil based on passive microwave remote sensing and numerical simulation of frozen soil processes under water and heat transfer principles provides valuable means for regional and global frozen soil dynamic monitoring and systematic spatial-temporal responses to global change. However, as an important data source of frozen soil processes, remotely sensed information has not yet been fully utilized in the numerical simulation of frozen soil processes. Although great progress has been made in remote sensing and frozen soil physics, yet few frozen soil research has been done on the application of remotely sensed information in association with the numerical model for frozen soil process studies. In the present study, a distributed numerical model for frozen soil dynamic studies based on coupled water-heat transferring theory in association with remotely sensed frozen soil datasets was developed. In order to reduce the uncertainty of the simulation, the remotely sensed frozen soil information was used to monitor and modify relevant parameters in the process of model simulation. The remotely sensed information and numerically simulated spatial-temporal frozen soil processes were validated by in-situ field observations in cold regions near the town of Naqu on the East-Central Tibetan Plateau. The results suggest that the overall accuracy of the algorithm for discriminating freeze and thaw status of surface soil based on passive microwave remote sensing was more than 95%. These results provided an accurate initial freeze and thaw status of surface soil for coupling and calibrating the numerical model of this study. The numerically simulated frozen soil processes demonstrated good performance of the distributed numerical model based on the coupled water-heat transferring theory. The relatively larger uncertainties of the numerical model were found in alternating periods between freezing and thawing of surface soil. The average accuracy increased by about 5% after integrating remotely sensed information on the surface soil. The simulation accuracy was significantly improved, especially in transition periods between freezing and thawing of the surface soil.  相似文献   

Numerical study on transient harbor oscillations induced by successive solitary waves   总被引：1，自引：1，他引：0  

Junliang Gao  Chunyan Ji  Yingyi Liu  Xiaojian Ma  Oleg Gaidai 《Ocean Dynamics》2018,68(2):193-209

Tsunamis are traveling waves which are characterized by long wavelengths and large amplitudes close to the shore. Due to the transformation of tsunamis, undular bores have been frequently observed in the coastal zone and can be viewed as a sequence of solitary waves with different wave heights and different separation distances among them. In this article, transient harbor oscillations induced by incident successive solitary waves are first investigated. The transient oscillations are simulated by a fully nonlinear Boussinesq model, FUNWAVE-TVD. The incident successive solitary waves include double solitary waves and triple solitary waves. This paper mainly focuses on the effects of different waveform parameters of the incident successive solitary waves on the relative wave energy distribution inside the harbor. These wave parameters include the incident wave height, the relative separation distance between adjacent crests, and the number of elementary solitary waves in the incident wave train. The relative separation distance between adjacent crests is defined as the ratio of the distance between adjacent crests in the incident wave train to the effective wavelength of the single solitary wave. Maximum oscillations inside the harbor excited by various incident waves are also discussed. For comparison, the transient oscillation excited by the single solitary wave is also considered. The harbor used in this paper is assumed to be long and narrow and has constant depth; the free surface movement inside the harbor is essentially one-dimensional. This study reveals that, for the given harbor and for the variation ranges of all the waveform parameters of the incident successive solitary waves studied in this paper, the larger incident wave heights and the smaller number of elementary solitary waves in the incident tsunami lead to a more uniform relative wave energy distribution inside the harbor. For the successive solitary waves, the larger relative separation distance between adjacent crests can cause more obvious fluctuations of the relative wave energy distribution over different resonant modes. When the wave height of the elementary solitary wave in the successive solitary waves equals to that of the single solitary wave and the relative separation distance between adjacent crests is equal to or greater than 0.6, the maximum oscillation inside the harbor induced by the successive solitary waves is almost identical to that excited by the single solitary wave.  相似文献   

Risk evaluation of dam-break environmental impacts based on the set pair analysis and cloud model     

Ge  Wei  Li  Zongkun  Li  Wei  Wu  Meimei  Li  Juanjuan  Pan  Yipeng 《Natural Hazards》2020,104(2):1641-1653

Natural Hazards - Many dams have been constructed around the world. Compared with the potential losses of life and economy, the environmental impacts caused by dam breach were less analyzed. As a...  相似文献   

晚第四纪MIS6以来柴达木盆地成盐作用对冰期气候的响应   总被引：2，自引：0，他引：2  

陈安东  郑绵平  宋高  王学锋  李洪普  韩光  袁文虎 《地质论评》2020,66(3):611-624

气候是控制柴达木盆地盐类沉积的主要因素之一,但是其作用机制尚待明确。作者以柴达木盆地察汗斯拉图盐湖的3个含盐剖面为研究对象,采用多接收电感耦合等离子质谱(MC-ICP-MS)铀系测年测定其沉积时代,并通过X射线粉晶衍射(XRD)分析测定其盐类矿物种类。铀系测年显示D18剖面石盐和芒硝层的沉积时代为13.1±2.0 ka BP～15.9±2.5 ka BP,其中芒硝沉积年代属于末次冰期MIS2晚期;MXK2剖面芒硝层的沉积时代分别为131.7±39.5 ka BP和158.3±10.8 ka BP,D12剖面芒硝层的沉积时代分别为166.6±20.2 ka BP和198.0±20.6 ka BP,可以对应于倒数第二次冰期MIS6。XRD分析确定了3个剖面的盐类矿物主要为芒硝、石盐和石膏。综合多个盐湖晚第四纪成盐数据,本文认为倒数第二次冰期MIS6和末次冰期MIS2是柴达木盆地晚第四纪重要的成盐期,冰期的冷干气候有利于石盐和芒硝等盐类沉积。柴达木盆地"冰期成盐"的根本原因,是由于冰期环境下盆地周边山体冰川规模的扩张以及干冷的冰期气候,共同造成了盐湖补给水量的减少。此外,晚第四纪MIS6和MIS2的冰期降温也是导致盆地中冷相盐类沉积的直接原因。  相似文献   

Simulation of urban expansion via integrating artificial neural network with Markov chain – cellular automata     

Tingting Xu  Jay Gao  Giovanni Coco 《International journal of geographical information science》2019,33(10):1960-1983

Accurate simulations and predictions of urban expansion are critical to manage urbanization and explicitly address the spatiotemporal trends and distributions of urban expansion. Cellular Automata integrated Markov Chain (CA-MC) is one of the most frequently used models for this purpose. However, the urban suitability index (USI) map produced from the conventional CA-MC is either affected by human bias or cannot accurately reflect the possible nonlinear relations between driving factors and urban expansion. To overcome these limitations, a machine learning model (Artificial Neural Network, ANN) was integrated with CA-MC instead of the commonly used Analytical Hierarchy Process (AHP) and Logistic Regression (LR) CA-MC models. The ANN was optimized to create the USI map and then integrated with CA-MC to spatially allocate urban expansion cells. The validated results of kappa and fuzzy kappa simulation indicate that ANN-CA-MC outperformed other variously coupled CA-MC modelling approaches. Based on the ANN-CA-MC model, the urban area in South Auckland is predicted to expand to 1340.55 ha in 2026 at the expense of non-urban areas, mostly grassland and open-bare land. Most of the future expansion will take place within the planned new urban growth zone.  相似文献   

中国物理海洋学研究70年:发展历程、学术成就概览   总被引：2，自引：2，他引：0  

魏泽勋  郑全安  杨永增  刘克修  徐腾飞  王凡  胡石建  谢玲玲  李元龙  杜岩  周磊  林霄沛  胡建宇  朱建荣  李均益  张正光  侯一筠  刘泽  田纪伟  黄晓冬  管玉平  刘志宇  杨庆轩  赵玮  宋振亚  刘海龙  董昌明  于卫东  连涛  陈朝晖  史久新  雷瑞波  刘煜  于福江  尹宝树  陈戈  王岩峰  李整林  熊学军  汪嘉宁  李晓峰  王永刚 《海洋学报》2019,41(10):23-64

本文概略评述新中国成立70年来物理海洋学各分支研究领域的发展历程和若干学术成就。中国物理海洋学研究起步于海浪、潮汐、近海环流与水团，以及以风暴潮为主的海洋气象灾害的研究。随着国力的增强，研究领域不断拓展，涌现了大量具有广泛影响力的研究成果，其中包括:提出了被国际广泛采用的“普遍风浪谱”和“涌浪谱”，发展了第三代海浪数值模式；提出了“准调和分析方法”和“潮汐潮流永久预报”等潮汐潮流的分析和预报方法；发现并命名了“棉兰老潜流”，揭示了东海黑潮的多核结构及其多尺度变异机理等，系统描述了太平洋西边界流系；提出了印度尼西亚贯穿流的南海分支(或称南海贯穿流)；不断完善了中国近海陆架环流系统，在南海环流、黑潮及其分支、台湾暖流、闽浙沿岸流、黄海冷水团环流、黄海暖流、渤海环流，以及陆架波方面均取得了深刻的认识；从大气桥和海洋桥两个方面对太平洋–印度洋–大西洋洋际相互作用进行了系统的总结；发展了浅海水团的研究方法，基本摸清了中国近海水团的分布和消长特征与机制，在大洋和极地水团分布及运动研究方面也做出了重要贡献；阐明了南海中尺度涡的宏观特征和生成机制，揭示了中尺度涡的三维结构，定量评估了其全球物质与能量输运能力；基本摸清了中国近海海洋锋的空间分布和季节变化特征，提出了地形、正压不稳定和斜压不稳定等锋面动力学机制；构建了“南海内波潜标观测网”，实现了对内波生成–演变–消亡全过程机理的系统认识；发展了湍流的剪切不稳定理论，提出了海流“边缘不稳定”的概念，开发了海洋湍流模式，提出了湍流混合参数化的新方法等；在海洋内部混合机制和能量来源方面取得了新的认识，并阐述了混合对海洋深层环流、营养物质输运等过程的影响；研发了全球浪–潮–流耦合模式，推出一系列海洋与气候模式；发展了可同化主要海洋观测数据的海洋数据同化系统和用于ENSO预报的耦合同化系统；建立了达到国际水准的非地转(水槽/水池)和地转(旋转平台)物理模 型实验平台；发展了ENSO预报的误差分析方法，建立了海洋和气候系统年代际变化的理论体系，揭示了中深层海洋对全球气候变化的响应；初步建成了中国近海海洋观测网；持续开展南北极调查研究；建立了台风、风暴潮、巨浪和海啸的业务化预报系统，为中国气象减灾提供保障；突破了国外的海洋技术封锁，研发了万米水深的深水水听器和海洋光学特性系列测量仪器；建立了溢油、危险化学品漂移扩散等预测模型，为伴随海洋资源开发所带来的风险事故的应急处理和预警预报提供科学支撑。文中引用的大量学术成果文献(每位第一作者优选不超过3篇)显示，经过70年的发展，中国物理海洋学研究培养了一支实力雄厚的科研队伍，这是最宝贵的成果。这支队伍必将成为中国物理海洋学研究攀登新高峰的主力军。  相似文献   

A comparison of the effectiveness of the roots of two grass species in reducing soil erosion on alluvial fans in south-east China     

Fangshi Jiang  Kaiwen He  Jiahui Lin  Hui Li  Zhenzhi Zhan  Jinshi Lin  Hongli Ge  Ming Kuang Wang  Yanhe Huang 《水文研究》2020,34(1):96-110

The effects of root systems on soil detachment by overland flow are closely related to vegetation types. The objective of this study was to quantify the effects of two gramineous roots (Paspalum mandiocanum with shallow roots and Pennisetum giganteum with deep roots) on soil detachment capacity, rill erodibility, and critical shear stress on alluvial fans of benggang in south-east China. A 4-m-long and 0.12-m-wide flume was used. Slope steepness ranged from 9% to 27%, and unit flow discharge ranged from 1.39 × 10⁻³ to 4.19 × 10⁻³ m² s⁻¹. The mean detachment capacities of P. mandiocanum and P. giganteum lands were 18% and 38% lower than that of bare land, respectively, and the effects of root on reducing soil detachment were mainly reflected in the 0- to 5-cm soil layer. The most important factors in characterizing soil detachment capacity were root length density and soil cohesion, and soil detachment capacity of the two grass lands could be estimated using flow shear stress, soil cohesion, and root length density (NSE = 0.90). With the increase in soil depth, rill erodibility increased, whereas shear stress decreased. The mean rill erodibilities of P. mandiocanum and P. giganteum lands were 81% and 61% as much as that of bare land, respectively. Additionally, rill erodibilities of the two grass lands could be estimated as an exponential function by root length density and soil cohesion (NSE = 0.88). The mean critical shear stress of P. mandiocanum and P. giganteum lands was 1.29 and 1.39 times that of bare land, respectively, and it could be estimated with a linear function by root length density (NSE = 0.76). This study demonstrated that planting of the two grasses P. mandiocanum and P. giganteum could effectively reduce soil detachment and enhance soil resistance to erosion on alluvial fans, with the deep roots of P. giganteum being more effective than the shallow roots of P. mandiocanum. The results are helpful for understanding the influencing mechanism of root systems on soil detachment process.  相似文献