Cloning of cytochrome P450 1A (CYP1A) genes from the hermaphrodite fish Rivulus marmoratus and the Japanese medaka Oryzias latipes     

Kim IC  Kim YJ  Yoon YD  Kawamura S  Lee YS  Lee JS 《Marine environmental research》2004,58(2-5):125-129

To use two small fish Rivulus marmoratus (Cyprinodontiformes, Rivulidae) and the Japanese medaka Oryzias latipes (Belloniformes) as testing models in molecular ecotoxicology, we have cloned the cytochrome P450 1A (CYP1A) gene after screening of both genomic DNA libraries, and sequenced 11,863 and 7,243 bp including all the exons and introns with promoter regions, respectively. The Rivulus and the medaka CYP1A gene consisted of seven exons (including non-coding exons) with high homology to mammals. In the promoter region, Rivulus CYP1A gene has seven xenobiotic response elements (XREs) and two metal response elements (MREs), while the Japanese medaka CYP1A gene has six XREs and four MREs. Interestingly, medaka CYP1A gene has a number of MREs at the promoter, which may affect its response on metal exposure. We describe here the gene structure of both fish CYP1A genes.  相似文献   

Depth distribution of radiolarians from the Chukchi and Beaufort Seas, western Arctic     

Takuya Itaki  Masashi Ito  Hisashi Narita  Naokazu Ahagon  Hideo Sakai 《Deep Sea Research Part I: Oceanographic Research Papers》2003,50(12):1507

The depth distributions of the radiolarian fauna in the Chukchi and Beaufort Seas, marginal seas of the western Arctic Ocean, were examined quantitatively in depth-stratified plankton tows from 4 or 5 intervals above 500 m and in surface sediments from various depths between 163 and 2907 m. The radiolarian assemblage from the water column in September 2000 was dominated by Amphimelissa setosa and followed by the Actinomma boreale/leptoderma group, Pseudodictyophimus gracilipes and Spongotrochus glacialis. These species are related to the Arctic Surface Water shallower than 150 m. This assemblage is similar to that in the Greenland Sea relating to the ice edge, but did not contain typical Pacific radiolarians in spite of the flow of water of Pacific origin in this region. The living depth of Ceratocyrtis historicosa was restricted to the relatively warm water between 300 and 500 m corresponding to the upper Arctic Intermediate Water (AIW) originating from the Atlantic Ocean. Radiolarian assemblages in the surface sediments are similar to those in the plankton tows, except for common Cycladophora davisiana in sediment samples below 500 m. C. davisiana is probably a deep-water species adapted to the lower AIW or the Canadian Basin Deep Water ventilated from the shelves.  相似文献   

Excess CO2 and pHexcess in the Intermediate Water Layer of the Northwestern Pacific     

Andrey Andreev  Makio Honda  Yuichiro Kumamoto  Masashi Kusakabe  Akihiko Murata 《Journal of Oceanography》2001,57(2):177-188

Excess CO₂ and pH_excess showing an increase in dissolved inorganic carbon and a decrease in pH from the beginning of the industrial epoch (middle of the 19th century) until the present time have been calculated in the intermediate water layer of the northwestern Pacific and the Okhotsk Sea. It is concluded that: (1) The Kuril Basin (Okhotsk Sea) and the Bussol' Strait areas are characterized by the greatest concentrations of excess CO₂ at isopycnal surfaces due to the processes of formation and transformation of intermediate water mass. (2) The largest difference in excess CO₂ concentration between the Okhotsk Sea and the western subarctic Pacific (about 8 µmol/kg) is found at the = 27.0. (3) The difference in excess CO₂ between the western subarctic Pacific and subtropical regions is significant only in the upper part of the intermediate water layer ( = 26.7–27.0). (4) About 10% of the excess CO₂ accumulation in the subtropical north Pacific is determined by water exchange with the subarctic Pacific and the Okhotsk Sea.  相似文献   

Turbulent structure in water under laboratory wind waves     

Ikuo Yoshikawa  Hiroshi Kawamura  Kuniaki Okuda  Yoshiaki Toba 《Journal of Oceanography》1988,44(3):143-156

The structure of the turbulent boundary layer underneath laboratory wind waves was studied by using a combination of a high-sensitivity thermometer array with a two-component sonic flowmeter. The temperature fluctuations are used to detect movements of water parcels, with temperature as a passive quantity. The turbulence energy was dominant in the frequency range (0.01 0.1 Hz), which was much smaller than the wind-wave frequency (2 5 Hz), and in which the turbulence was anisotropic. There was a frequency range (0.2 2 Hz for velocity, 0.2 5 Hz for temperature fluctuation) where the turbulence was isotropic and had a –5/3 slope in the energy spectrum. These points are the same as those in previous works. However, by analyses of the time series by using a variable-interval time-averaging technique (VITA), it has been found that conspicuous events in this main turbulence energy band are the downward bursting from the vicinity of the water surface. Thus the structure of the water layer underneath the wind waves has characters which are similar to the familiar turbulent boundary layer over a rough solid wall, as already conceived. It has been found that, at the same time, the turbulence energy can be related to quantities of the wind waves (the root mean squared water level fluctuation and the wave peak frequency), for different wind and wave conditions. That is, the turbulence underneath the wind waves develops under a close coupling with the wind waves.  相似文献   

The Formation and Circulation of the Intermediate Water in the Japan Sea   总被引：1，自引：0，他引：1  

Jong-Hwan Yoon  Hideyuki Kawamura 《Journal of Oceanography》2002,58(1):197-211

In order to clarify the formation and circulation of the Japan/East Sea Intermediate Water (JESIW) and the Upper portion of the Japan Sea Proper Water (UJSPW), numerical experiments have been carried out using a 3-D ocean circulation model. The UJSPW is formed in the region southeast off Vladivostok between 41°N and 42°N west of 136°E. Taking the coastal orography near Vladivostok into account, the formation of the UJSPW results from the deep water convection in winter which is generated by the orchestration of fresh water supplied from the Amur River and saline water from the Tsushima Warm Current under very cold conditions. The UJSPW formed is advected by the current at depth near the bottom of the convection and penetrates into the layer below the JESIW. The origin of the JESIW is the low salinity coastal water along the Russian coast originated by the fresh water from the Amur River. The coastal low salinity water is advected by the current system in the northwestern Japan Sea and penetrates into the subsurface below the Tsushima Warm Current region forming a subsurface salinity minimum layer. This revised version was published online in August 2006 with corrections to the Cover Date.  相似文献   

Air-Sea Gas Transfer Velocity in Stormy Winter Estimated from Radon Deficiency     

Hitoshi Kawabata  Hisashi Narita  Koh Harada  Shizuo Tsunogai  Masashi Kusakabe 《Journal of Oceanography》2003,59(5):651-661

Thirteen vertical profiles of ²²⁶Ra and ²²²Rn in the near-surface water were obtained in the western North Pacific in winter, and the gas transfer velocities across the air-sea interface were estimated. The transfer velocities found by applying a steady state model varied widely from 2.1 to 30.2 m day⁻¹ with a mean of 9.4 m day⁻¹. The mean value is almost 5 times higher than that in summer in other oceans, and the maximum value is a record high for world oceans. This is partly due to the inadequacy of the steady state model, which overestimates when stronger winds blow in more recent days than the ²²²Rn half-life of about 4 days. In fact, a strong low pressure zone passed through the station about 2 days earlier, which was one of the low pressure zones that with a period of develop once a week or so in the northwestern North Pacific in winter. Instead of steady-state removal, if half of the radon removal occurred sporadically every 7 days, and the last removal took place two days before the observation, the transfer velocity would be 26 m day⁻¹. Our mean transfer velocity, which is less than 20% different from the steady state value including both overestimated and underestimated values, 9.4 ± 4.8 m day⁻¹, seems to represent the mean state of this region in winter. This suggests that the gas exchange fluxes under extremely rough conditions in the open ocean are larger than those estimated by using a transfer velocity equation with a linear or quadratic relationship with wind speed. This revised version was published online in July 2006 with corrections to the Cover Date.  相似文献   

Validation and Improvement of Satellite-Derived Surface Solar Radiation over the Northwestern Pacific Ocean     

Kawai  Yoshimi  Kawamura  Hiroshi 《Journal of Oceanography》2005,61(1):79-89

The purpose of this study is to validate and improve satellite-derived downward surface shortwave radiation (DSSR) over the northwestern Pacific Ocean using abundant in situ data. The DSSR derivation model used here assumes that the reduction of solar radiation by clouds is proportional to the product of satellite-measured albedo and a cloud attenuation coefficient. DSSR is calculated from Geostationary Meteorological Satellite-5/Visible Infrared Spin-Scan Radiometer data in 0.05° × 0.05° grids. The authors first compare the satellite DSSR derived with a cloud attenuation coefficient table determined in past research with in situ values. Although the hourly satellite DSSR agrees well with land in situ values in Japan, it has a bias of +13∼+34 W/m² over the ocean and the bias is especially large in the low latitudes. The authors then improve the coefficient table using the ocean in situ data. Usage of the new table successfully reduces the bias of the satellite DSSR over the ocean. The cloud attenuation coefficient for low-albedo cases over the ocean needs to be larger in the low latitudes than past research has indicated. Daily and hourly DSSR can be evaluated from the satellite data with RMS errors of 11–14% and 30–33%, respectively, over a wide region of the ocean by this model. It is also shown that the cloud attenuation coefficient over land needs to be smaller than over the ocean because the effect of the radiation reflected by the land surface cannot be ignored.  相似文献   

Effects of scattering and resonance on energy dissipation of an internal tide in a narrow shelf     

Yuji Kawamura  Yujiro Kitade 《Journal of Oceanography》2007,63(1):15-25

The effects of scattering and resonance on the energy dissipation of an internal tide were investigated using a two-dimensional model which is a reassembled version of the theoretical generation model devised by Rattray et al. (1969) for internal tide. The basic character of the scattering process at the step bottom was first investigated with a wide shelf model. When the internal wave incited from a deep region (Region II) into the shallow shelf region (Region I), a passing wave into the shallow region, a reflected wave into the deep region, and a beam-like wave, i.e. a scattered wave (SW), emanated at the step bottom. The SW, which consists of the superposition of numerous internal modes, propagated upward/downward into both regions. The general properties of the SW were well expressed around the shelf edge, even in the present model with viscosity effect. The amplitude of the SW decreased dramatically when the depth of the velocity maximum of the incident internal wave in Region II corresponded with the depth of the shelf edge. In the narrow shelf model, where the decay distance of the internal wave in Region I is longer than the shelf width, the incident internal wave reflected at the coast to form a standing wave. When the internal wave in Region I is enhanced by the resonance, the energy of the SW in Region II is also intensified. Furthermore, the energy of the modes in Region II predominated when the velocity maximum is identical to that of the dominant mode in Region I. These results suggest that the spatial scale of shelf region is a very important factor governing the energy dissipation of the internal tide through reflection and scattering in a narrow shelf.  相似文献   

Outbreak of warm water from the Kuroshio South of Japan     

Y. Toba  H. Kawamura  K. Hanawa  H. Otobe  K. Taira 《Journal of Oceanography》1991,47(6):297-303

During the concentrated observation (April–May 1988) conducted as a part of the Ocean Mixed Layer Experiment (OMLET) in the sea area south of Japan, a conspicuous outbreak of warm water occurred from the large-meander region of the Kuroshio toward the southwest in the direction of the former Ocean Weather Station “T”. A series of NOAA-AVHRR infrared images clearly showed the process of this event. A surface buoy-mooring system deployed in this experiment recorded the arrival of this outbreak of water, in terms of the rise of sea-surface temperature (SST) of 1.5°C and the flow of warm water of 1.5kt toward the northwest at “T”. We studied this phenomenon by combining time series of infrared SST images with the oceanographic data obtained by two research vessels. The warm water was about 100 m deep in the section at 137°E along the edge of the Off-Shikoku Warm Water. It was estimated that about twenty outbreaks of this kind in a year can compensate a large heat loss to the atmosphere above this ocean region.  相似文献   

Difference characteristics of sea surface temperature observed by GLI and AMSR aboard ADEOS-II     

Kohtaro Hosoda  Hiroshi Murakami  Akira Shibata  Futoki Sakaida  Hiroshi Kawamura 《Journal of Oceanography》2006,62(3):339-350

This study compares infrared and microwave measurements of sea surface temperature (SST) obtained by a single satellite. The simultaneous observation from the Global Imager (GLI: infrared) and the Advanced Microwave Scanning Radiometer (AMSR: microwave) aboard the Advanced Earth Observing Satellite-II (ADEOS-II) provided an opportunity for the intercomparison. The GLI-and AMSR-derived SSTs from April to October 2003 are analyzed with other ancillary data including surface wind speed and water vapor retrieved by AMSR and SeaWinds on ADEOS-II. We found no measurable bias (defined as GLI minus AMSR), while the standard deviation of difference is less than 1°C. In low water vapor conditions, the GLI SST has a positive bias less than 0.2°C, and in high water vapor conditions, it has a negative (positive) bias during the daytime (nighttime). The low spatial resolution of AMSR is another factor underlying the geographical distribution of the differences. The cloud detection problem in the GLI algorithm also affects the difference. The large differences in high-latitude region during the nighttime might be due to the GLI cloud-detection algorithm. AMSR SST has a negative bias during the daytime with low wind speed (less than 7 ms⁻¹), which might be related to the correction for surface wind effects in the AMSR SST algorithm.  相似文献