Habitability analyses of aquatic bacteria     

Md. Nurul Haider  Masahiko Nishimura  Minoru Ijichi  Ching-chia Yang  Wataru Iwasaki  Kazuhiro Kogure 《Journal of Oceanography》2018,74(2):197-207

Habitability is defined as an ability of an organism to inhabit different environments. Habitability of organisms, however, cannot be inferred from analyses such as a whole genome or community structures. A recently developed database, the MetaMetaDB, gives us information from what kind of environments one particular 16S rRNA sequence data has ever been obtained, and thus enables us to infer the habitability of the bacterium in question. In order to check the applicability of this database to study the habitability of aquatic bacteria, samples collected at two Naka River stations, one estuarine station from Naka River Estuary, two coastal stations at Oarai in Ibaraki Prefecture, Japan and one station in the Kuroshio Current of the western North Pacific were examined. The phylotypes were tracked against the MetaMetaDB and it was reasonably found that the low-salinity stations were dominated by sequences with “freshwater and groundwater”, “human” and “wastewater” habitat identities, while the high-salinity stations were dominated by those with a “marine” identity. The phylotypes of low-salinity stations with a particular habitat identity were absent or rare in the high-salinity stations and vice versa. The MetaMetaDB also showed that sequences of Cyanobacteria or related phylogenetic groups may be present in the human gut, as well as the probable distribution of the relatives (ancestors/descendants/siblings) of some bacteria. These overall findings proved that the MetaMetaDB is useful as a new tool to infer microbial habitability and it gives us new information on the possible origin and ecology of microorganisms in the environments.  相似文献   

Tide-related Changes in mRNA Abundance of Aromatases and Estrogen Receptors in the Ovary and Brain of the Threespot Wrasse <Emphasis Type="Italic">Halichoeres trimaculatus</Emphasis>     

Dae-Ju Oh  Sung-Pyo Hur  Selma Bouchekioua  Yuki Takeuchi  Shingo Udagawa  Neelakanteswar Aluru  Yong-Ju Park  Ji-Gweon Park  Se-Jae Kim  Thomas W. Moon  Mathilakath M. Vijayan  Akihiro Takemura 《Ocean Science Journal》2018,53(2):239-249

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Dark energy cosmological models with cosmic string     

T. Vinutha  V. U. M. Rao  Bekele Getaneh  Molla Mengesha 《Astrophysics and Space Science》2018,363(9):188

In this paper we have studied the anisotropic Kantowski-Sachs, locally rotationally symmetric (LRS) Bianchi type-I and LRS Bianchi type-III geometries filled with dark energy and one dimensional cosmic string in the Saez-Ballester theory of gravitation. To get physically valid solution we take hybrid expansion law of the average scale factor which is a product of power and exponential type of functions that results in time dependent deceleration parameter (\(q\)). The equation of state parameter of dark energy (\(\omega _{\mathit{de}}\)) has been discussed and we have observed that for the three models it crosses the phantom divide line (\(\omega _{\mathit{de}} = -1\)) and shows quintom like behavior. The density of dark energy (\(\rho _{\mathit{de}}\)) is an increasing function of redshift and remains positive throughout the evolution of the universe for the three models. Moreover in Kantowski-Sachs and LRS Bianchi type-I geometries the dark energy density dominates the string tension density (\(\lambda \)) and proper density (\(\rho \)) throughout the evolution of the universe. The physical and geometrical aspects of the statefinder parameters (\(r,s\)), squared speed of sound (\(v_{s}^{2} \)) and \(\omega _{\mathit{de}}\)–\(\omega ^{\prime }_{\mathit{de}}\) plane are also discussed.  相似文献   

An on Orbit Determination of Point Spread Functions for the <Emphasis Type="Italic">Interface Region Imaging Spectrograph</Emphasis>     

Hans Courrier  Charles Kankelborg  Bart De Pontieu  Jean-Pierre Wülser 《Solar physics》2018,293(9):125

Using the 2016 Mercury transit of the Sun, we characterize on orbit spatial point spread functions (PSFs) for the Near- (NUV) and Far- (FUV) Ultra-Violet spectrograph channels of NASA’s Interface Region Imaging Spectrograph (IRIS). A semi-blind Richardson–Lucy deconvolution method is used to estimate PSFs for each channel. Corresponding estimates of Modulation Transfer Functions (MTFs) indicate resolution of 2.47 cycles/arcsec in the NUV channel near 2796 Å and 2.55 cycles/arcsec near 2814 Å. In the short (\({\approx}\,1336~\mathring{\mathrm{A}}\)) and long (\({\approx}\,1394~\mathring{\mathrm{A}}\)) wavelength FUV channels, our MTFs show pixel-limited resolution (3.0 cycles/arcsec). The PSF estimates perform well under deconvolution, removing or significantly reducing instrument artifacts in the Mercury transit spectra. The usefulness of the PSFs is demonstrated in a case study of an isolated explosive event. PSF estimates and deconvolution routines are provided through a SolarSoft module.  相似文献   

Template-based classification of SDSS-<Emphasis Type="BoldItalic">GALEX</Emphasis> point sources     

Ayesha Anjum  Mousumi Das  Jayant Murthy  S. B. Gudennavar  Rajesh Gopal  S. G. Bubbly 《Journal of Astrophysics and Astronomy》2018,39(5):61

We have classified a sample of 37,492 objects from SDSS into QSOs, galaxies and stars using photometric data over five wave bands (u, g, r, i and z) and UV GALEX data over two wave bands (near-UV and far-UV) based on a template fitting method. The advantage of this method of classification is that it does not require any spectroscopic data and hence the objects for which spectroscopic data is not available can also be studied using this technique. In this study, we have found that our method is consistent by spectroscopic methods given that their UV information is available. Our study shows that the UV colours are especially important for separating quasars and stars, as well as spiral and starburst galaxies. Thus it is evident that the UV bands play a crucial role in the classification and characterization of astronomical objects that emit over a wide range of wavelengths, but especially for those that are bright at UV. We have achieved the efficiency of 89% for the QSOs, 63% for the galaxies and 84% for the stars. This classification is also found to be in agreement with the emission line diagnostic diagrams.  相似文献   

Maximizing the community exploitation of the VLTI 2nd-generation instruments     

Stefan Kraus  Paulo Garcia  Guy Perrin 《Experimental Astronomy》2018,46(3):511-516

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Burial and exhumation of the Hoh Xil Basin,northern Tibetan Plateau: Constraints from detrital (U-Th)/He ages     

Jin-Gen Dai  Matthew Fox  David L. Shuster  Jeremy Hourigan  Xu Han  Ya-Lin Li  Cheng-Shan Wang 《Basin Research》2020,32(5):894-915

The uplift and associated exhumation of the Tibetan Plateau has been widely considered a key control of Cenozoic global cooling. The south-central parts of this plateau experienced rapid exhumation during the Cretaceous–Palaeocene periods. When and how the northern part was exhumed, however, remains controversial. The Hoh Xil Basin (HXB) is the largest late Cretaceous–Cenozoic sedimentary basin in the northern part, and it preserves the archives of the exhumation history. We present detrital apatite and zircon (U-Th)/He data from late Cretaceous–Cenozoic sedimentary rocks of the western and eastern HXB. These data, combined with regional geological constraints and interpreted with inverse and forward model of sediment deposition and burial reheating, suggest that the occurrence of ca. 4–2.7 km and ca. 4–2.3 km of vertical exhumation initiated at ca. 30–25 Ma and 40–35 Ma in the eastern and western HXB respectively. The initial differential exhumation of the eastern HXB and the western HXB might be controlled by the oblique subduction of the Qaidam block beneath the HXB. The initial exhumation timing in the northern Tibetan Plateau is younger than that in the south-central parts. This reveals an episodic exhumation of the Tibetan Plateau compared to models of synchronous Miocene exhumation of the entire plateau and the early Eocene exhumation of the northern Tibetan Plateau shortly after the India–Asia collision. One possible mechanism to account for outward growth is crustal shortening. A simple model of uplift and exhumation would predict a maximum of 0.8 km of surface uplift after upper crustal shortening during 30–27 Ma, which is insufficient to explain the high elevations currently observed. One way to increase elevation without changing exhumation rates and to decouple uplift from upper crustal shortening is through the combined effects of continental subduction, mantle lithosphere removal and magmatic inflation.  相似文献   

渤海湾盆地歧口凹陷地层压力结构特征     

姜文亚  宋泽章  周立宏  蒲秀刚  王娜  代昆  万伟超  刘祥柏 《吉林大学学报(地球科学版)》2020,50(1):52-69

深化含油气沉积盆地的压力结构研究，厘清异常压力的空间展布，对划分含油气系统、评价有利输导体系与明确勘探甜点区带具有重要的理论和实践意义。为深化渤海湾盆地富油凹陷的油气二次勘探，本文以歧口凹陷为研究对象，对其压力结构进行重点刻画。在实测地层压力的校正下，综合单井、连井和二维地震地层压力结构分析，厘清了歧口凹陷的压力结构特征，识别出4类纵向压力结构：①单超压带结构；②双超压带结构；③多超压带结构；④静水压力结构。纵向上，歧口地区存在3类纵向压力系统样式——单超压系统、双超压系统、静水常压系统。双超压系统是歧口凹陷的主要压力系统样式，广泛发育于主凹和各大次凹；从凹陷中心向盆地边缘，双超压系统逐渐向单超压系统、静水常压系统过渡。单超压系统主要分布于盆地边缘的斜坡和潜山区，如歧北高斜坡、羊三木-扣村潜山等。静水常压系统则主要分布在离深凹区更远的沈青庄潜山和埕北斜坡区域。上部超压系统和下部超压系统的顶板分别位于东营组和沙三段内部，侧向上受盆地边缘和深大断裂控制。上部超压系统的形成主要受欠压实作用控制，以歧口主凹为中心呈环带分布；而下部超压系统的形成主要受生烃作用控制，以主凹和几大次凹为中心分布。未来，下部超压系统中保存的天然气将成为歧口地区超深层天然气勘探的重点对象。  相似文献   

Assessments on slope instabilities triggered by engineering excavations near a small settlement (Turkey)     

TUNCAY Ergün 《山地科学学报》2018,15(1):114-129

In this study, the mechanisms of slope instabilities triggered by engineering excavations at location of a planned tunnel portal in the northwest region of Turkey were assessed, and stability of the current slopes which has impacts on safety of a settlement (village) and agricultural fields was investigated. In the first stage of the study, in order to identify the geological units and structural properties of the sedimentary rocks in the area, to clarify the mechanisms of instabilities and to characterize discontinuity and rock mass properties field works were conducted. In this content, geotechnical boreholes, geophysical explorations between the boreholes, line surveys to explore discontinuity properties, preparation of slope profiles using topographical techniques and sampling of rock blocks and discontinuity planes were performed. In the second stage, laboratory tests were carried out on the samples to determine the geomechnical properties of the slope forming materials and discontinuities. Then, back analyses of the instabilities were made to assess the responsible shear strength parameters of the geological units during failures by considering laboratory shear test results too. Based on the backanalyses of the failures, the strength properties of the slope debris were estimated, and it has been clarified that the residual shear strength properties are the factors controlling slip mechanism along the beddings. Following the stability analyses, it is understood that a further instability along the mass or bedding planes in the failed and redesigned area are not expected, if the current slope geometry is not changed. However, safety factor calculated for the slope in the debris is 1.1 which is well below the recommended value in the literature. The minimum safety factor for currently stable slopes which were cut at the eastern part of the failed area is 1.22 which is also less than that suggested in literature. Some remedial measures such as mini-pile or slope flattening are suggested after analyses to increase the factor of safety for this part below the settlement.  相似文献   

Global-Mode Analysis of Full-Disk Data from the <Emphasis Type="Italic">Michelson Doppler Imager</Emphasis> and the <Emphasis Type="Italic">Helioseismic and Magnetic Imager</Emphasis>     

Timothy P. Larson  Jesper Schou 《Solar physics》2018,293(2):29

Building upon our previous work, in which we analyzed smoothed and subsampled velocity data from the Michelson Doppler Imager (MDI), we extend our analysis to unsmoothed, full-resolution MDI data. We also present results from the Helioseismic and Magnetic Imager (HMI), in both full resolution and processed to be a proxy for the low-resolution MDI data. We find that the systematic errors that we saw previously, namely peaks in both the high-latitude rotation rate and the normalized residuals of odd \(a\)-coefficients, are almost entirely absent in the two full-resolution analyses. Furthermore, we find that both systematic errors seem to depend almost entirely on how the input images are apodized, rather than on resolution or smoothing. Using the full-resolution HMI data, we confirm our previous findings regarding the effect of using asymmetric profiles on mode parameters, and also find that they occasionally result in more stable fits. We also confirm our previous findings regarding discrepancies between 360-day and 72-day analyses. We further investigate a six-month period previously seen in \(f\)-mode frequency shifts using the low-resolution datasets, this time accounting for solar-cycle dependence using magnetic-field data. Both HMI and MDI saw prominent six-month signals in the frequency shifts, but we were surprised to discover that the strongest signal at that frequency occurred in the mode coverage for the low-resolution proxy. Finally, a comparison of mode parameters from HMI and MDI shows that the frequencies and \(a\)-coefficients agree closely, encouraging the concatenation of the two datasets.  相似文献