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1.
本研究将交叉引物恒温扩增技术(cross priming amplification,CPA)与核酸试纸条相结合建立一种副溶血性弧菌(Vibrio parahaemolyticus)快速可视化检测方法。针对副溶血性弧菌特有的不耐热溶血素基因tlh的六个不同区域设计两对特异性引物和一对检测探针,通过优化反应条件确定了最佳反应体系。CPA-核酸试纸条方法对副溶血性弧菌的检测具有较强的特异性,对纯培养物的检测灵敏度达到58 cfu/m L,对污染牡蛎中副溶血性弧菌的检测灵敏度为5.2 cfu/g,比传统的PCR技术灵敏度提高了10倍,且具有较高的稳定性。交叉引物恒温扩增技术与核酸试纸条相结合的方法操作简便、特异性强、灵敏度高且能有效防止污染,可用于现场及基层单位副溶血性弧菌的快速检测。 相似文献
2.
The behaviour of two species of foraminifera (Allogromia laticollaris and Ammonia beccarii) towards living and dead bacteria and inorganic particles was monitored using a cell-permeant fluorescent nucleic acid stain. The foraminifera were studied in seawater containing fluorescently labelled dead and living bacteria, and/or polystyrene particles of the same size as a control. Time-lapse observations under a fluorescence microscope clearly revealed pseudopodial transport of stained bacteria and uptake of bacteria inside the foraminifera. In contrast, no uptake of polystyrene particles was ever observed, although the foraminifera collected these particles and deposited them along the outside of the test. We conclude that foraminifera distinguish food and non-food particles while collecting. There appears to be a variation of uptake rate and final amount of ingested and digested bacteria. These variations occur between individuals of different size and species, and between sampling times (September 2001 and July 2002). 相似文献
3.
本实验针对两次突发的饲养海月水母(Aureliaaurita)大规模烂洞解体状况,通过对病灶处进行细菌培养,从其中每次发病水母中均各分离到2种优势病原菌菌株,利用PCR扩增和DNA测序技术,获得优势菌株16SrRNA基因序列,通过生物信息比对分析显示,导致两次海月水母发病的病原菌菌株分别为2种嗜冷杆菌(Psychrobacter sp.)和2种弧菌(Vibrio splendidusVibrio neptunius)。通过利用福林酚法进行此四种优势菌株的细菌发酵培养液蛋白酶活性的测定,结果显示,此4种细菌均具有较强的蛋白酶活性。根据实验结果推测,分离所得的2种嗜冷杆菌菌株(Paa1Paa2)和2种弧菌菌株(Vaa1Vaa2)作为此次发病海月水母的病原菌,有可能均是通过分泌胞外蛋白酶侵蚀水母伞体,从而导致伞体烂洞解体。通过本次实验分析,推测自然条件下水母暴发后的快速消亡是由水母自身免疫下降与细菌侵染的共同作用导致。 相似文献
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鳗弧菌(Vibrio anguillarum)可感染鳗鲡、虹鳟和大菱鲆等多种水产动物,是水产养殖中的一种重要病原菌,对其进行快速检测是病害防控的前提和基础。利用鳗弧菌与其核酸适配体之间有较强的亲和特异性,首次建立了一种基于核酸适配体的可定量检测鳗弧菌的差减荧光法。该方法对鳗弧菌有较好的特异性,对鳗弧菌的检测荧光值是其他菌(溶藻弧菌、哈维氏弧菌、铜绿假单胞菌、变形假单胞菌、嗜水气单胞菌、迟钝爱德华氏菌和大肠杆菌)的4～11倍,对鳗弧菌的最低检测限为102CFU/mL,可用于102～108CFU/mL的范围内的定量检测。通过对不同盐度海水和鱼体组织样品进行加标回收检测,结果表明,回收率和相对标准偏差等指标均符合相应的标准,说明该检测方法可用于海水样品和水产动物组织中鳗弧菌的检测。 相似文献
6.
To evaluate the applicability of a diffusive gradient in thin film (DGT) probe for monitoring dissolved metals in coastal seawater, DGT-labile metal concentrations were compared with total dissolved metal concentrations using spiked and natural seawater samples in the laboratory and transplanted mussels (Mytilus galloprovincialis). This was achieved through the simultaneous deployment of DGT probes and transplanted mussels in Ulsan Bay during winter and summer. DGT-labile metal concentrations were 45% (Cu) ~ 90% (Zn) of total dissolved concentrations, and the order of non-labile concentrations was Cu > Pb > Co ~ Ni > Cd ~ Zn in both metal-contaminated and non-contaminated seawater samples, which was similar to the order of stability of metal complexes in the Irving–Williams series. The overall variability of the DGT probe results within and between tanks was less than 10% (relative standard deviation: RSD) for all the metals tested during a 48-h deployment. The accumulation of metals, as determined by DGT probes, represented the spatial gradients better than the transplanted mussels did for all of the metals tested, and the extent of metal accumulation in mussels differed depending on the metal. The comparison of results for the DGT probe and the transplanted mussels in two seasons (winter and summer) suggested that metal accumulation in mussels was controlled by the physiological factors of mussels and partly by their diet (particulate metal loadings). The DGT probe could be used as a monitoring tool for dissolved metals in coastal seawater because its results explained only labile species. When using the DGT probe, slightly more than half of the total dissolved concentration in seawater samples for all the metals investigated displayed timeintegrated properties and distinct spatial gradients from pristine to metal-contaminated seawater. 相似文献
7.
The heterotrophic marine bacterium Vibrio alginolyticus was shown to produce extracellular copper-binding compound (s) when exposed to copper in a seawater medium. Fractionation and analysis of copper, and methionine incorporation in culture supernatant fractions showed that the copper-binding compound coeluted with material which was radiolabeled with 35S methionine. This suggests that the copper-binding compound may be proteinaceous. Analysis of label incorporation from 14C glucose into the fraction containing the copper-binding compound indicated that it was produced actively by the cells during recovery from copper toxicity, and was not present because of non-specific release by lysed bacterial cells. Concentrated supernatants from control and copper-challenged cultures contained two compounds which could be marginally resolved by size exclusion HPLC (26 kD and 28 kD), and which were produced at about a ten-fold higher level in copper-challenged cultures than in controls. These data indicate that the bacteria respond to toxic copper levels by excretion of a ca. 28 kD compound (s), which serves to detoxify copper in the medium by formation of organic copper complexes.The data suggest a potential role for macromolecules excreted by heterotrophic bacteria in control of copper ion activity in seawater. The production of copper-complexing compounds in response to copper represents a mechanism through which bacteria may directly influence the speciation of metal ions in seawater. 相似文献
8.
Masachika Maeda 《Journal of Oceanography》1980,36(3):167-176
This article summarizes the author's current work on microbial degradation of nucleic acid. The aim of this work is to elucidate parts of the saprogenic process in the marine ecosystem through the study of the behavior of nucleic acid-hydrolyzing bacteria inhabiting seawater and sediments.Considerably large population of nucleic acid-hydrolyzing bacteria was found to occur in seawater and sediments. The main genera of these microbes areVibrio spp. in coastal seas, andPseudomonas spp. in the oceanic waters. As a result of microbial attack, nucleic acid components are released into seawater. The properties of extracellular nuclease produced by a marineVibrio sp. are well adapted to the seawater environment; consequently this enzyme has high activity and stability in seawater. By determining nuclease activity in seawater and sediments, the intensities of nucleic acid-hydrolysisin situ were evaluated.Distribution patterns of marine bacteria are also discussed in reference to the occurrence of phytoplankton in seawater. 相似文献
9.
The molecular distribution of dissolved proteins in seawater from coastal marine environments in Uranouchi Bay, Kochi Prefecture, is first reported in this article. Occurrence of bacteria-derived dissolved proteins and their source bacteria were examined using a probe of the antibody (anti-Omp35La) against a porin outer membrane protein (Omp35La) of the fish pathogenic bacterium Vibrio (Listonella) anguillarum. The electrophoretograms of dissolved proteins from coastal seawater showed a large number of discrete and individual proteins overlapped each other over a wide range of molecular masses indicating active processes in coastal environments in transferring proteins from organisms to the inanimate dissolved protein pool. Among the dissolved proteins, 37 kDa- and 18 kDa-proteins reacted with the Omp35La. In order to isolate the source bacteria of such dissolved proteins, bacteria from seawater and diseased fish were screened by colony Western blotting with anti-Omp35La. The reactive strains were further examined in sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE)/Western blotting to verify the presence of Omp35La homologues among the outer membrane proteins of such strains. Outer membrane proteins reacting with anti-Omp35La were detected in only 4 strains of the 129 strains that were positive in the colony Western blotting. The level of possible source bacteria of 37 kDa- and 18 kDa-dissolved proteins was suggested to be 5–6 orders of magnitude lower than the total bacterial count. The present study leads us to hypothesize that a minor portion of the bacterial assemblage is responsible for the dissolved proteins in the coastal waters. 相似文献
10.
提要应用BLAST程序和DNAstar软件,比较分析了5株副溶血弧菌和其他细菌的16S—23S rDNA间区序列,选取IGSIA作为扩增靶区,结合相邻的16S rDNA序列,设计合成了一对特异性引物,通过优化扩增条件,建立了快速检测副溶血弧菌的PCR方法,对其特异性和敏感性进行了探讨,并初步进行了应用研究。结果表明,新建的PCR方法能特异性地扩增出大小为306bp和552bp的2条带,分别对应于副溶血弧菌的IGS0和IGSIA,检测灵敏度为5.6×102CFU/ml,半个工作日即可得到准确的结果,能有效检测出在杂色鲍、凡纳滨对虾和各种水质中的副溶血弧菌,适用于海洋水产动物副溶血弧菌病的早期快速诊断、水产品的检疫及水质环境的监测。 相似文献
11.
Partial rDNA sequences of Prorocentrum minimum and Takayama pulchella were amplified,cloned and sequenced,and these sequence data were deposited in the GenBank.Eight oligonucleotide probes(DNA probes)were designed based on the sequence analysis.The probes were employed to detect and identify P.minimum and T. pulchella in unialgal and mixed algal samples with a fuorescence in situ hybridization method using flow cytometry.Epifluorescence micrographs showed that these specific probes labeled with fluorescein isothiocyanate entered the algal cells and bound to target sequences,and the fluorescence signal resulting from whole-cell hybridization varied from probe to probe.These DNA probes and the hybridization protocol we developed were specific and effective for P.minimum and T. pulchella,without any specific binding to other algal species.The hyrbridization efficiency of difierent probes specific to P.minimum was in the order:PMl8S02＞PM28S02＞PM28S01＞PM18S01,and that of the probes specific to T. pulchella was TP18S02＞TP28S01＞TP28S02＞TP18S01.The djfferent hybridization efficiency of the DNA probes could also be shown in the fuorescent signals between the labeled and unlabeled cells demonstrated using flow cytometry.The DNA probes PM18S02,PM28S02,TPl8S02 and TP28S01,and the protocol,were also useful for the detection of algae in natural samples. 相似文献
12.
本研究选取5种海洋动植物大分子高聚物或其天然组织,包括虾壳、鱼鳞、海带叶片、几丁质和壳聚糖,分别在海水表层和沉积物环境中进行富集,定期取样,通过高通量测序分析菌群多样性。结果发现,不同有机物原位富集的细菌多样性存在较大的差异,而且同种底物在海水表层与沉积物中的降解菌菌群差异较大。从物种多样性看,在海水表层环境中富集的鱼鳞样品种群最丰富,而沉积物环境中富集的海带叶片样品菌群多样性最低,除其优势菌群为热袍菌门外,其他所有富集物中优势菌均为变形菌门。其中脱硫杆菌科、黄杆菌科、脱硫弧菌科和弧菌科占有较大比例,脱硫杆菌科在所有样品中优势较大,黄杆菌科在海水表层环境样品中为优势菌群,弧菌科在沉积物样品几丁质和壳聚糖样品中占比较高。本研究通过对同种海洋环境中不同富集样品之间以及同种底物不同环境中富集菌群之间的比较,分析结果得到了原位条件下参与大分子聚合物降解的菌群种类,但有待于在更多不同的海域富集物中进行验证。 相似文献
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To get a better understanding of the starvation survival strategy of pathogenic Vibrio alginolyticus, log-phase cells were inoculated into sterile natural seawater for starvation studies. The results showed that all of total bacteria number, viable bacteria number and CFU number of V. alginolyticus increased remarkably at the initial starvation stage; after reaching their peaks at 5 d, both total bacteria number and viable bacteria number of V. alginolyticus fell slowly, while the CFU number fell more quickly after reaching its peak at 10 d; V. alginolyticus elongated their cells at the prophase of starvation, and then shrunk their volume and turned their shapes into ovals from rods at the anaphase of starvation; starved cells showed more sensitivity to heating and UV; starved cells showed no significant difference from unstarved ones at the lowest detection limit determined by indirect enzyme-linked immu- nosorbent assay （ELISA） ; starved cells＇ ability to adhere to the skin mucus of large yellow croaker （ Pseudosciaena crocea） showed a sharp decline as the starvation time increases; the cellular protein of V. alginolyticus increased remarkably at the ariaphase of starvation. The results indicated that pathogenic V. alginolyticus could survive in starvation for relatively long periods of time （ ≥2 months） in 28℃ natural seawater due to the morphological and physiological changes; however, starved V. alginolyticus cells showed less virulence and higher sensitivity under environmental stresses. 相似文献
15.
Microbial degradation and utilization of proteins derived from bacterial detritus were investigated in a microcosm experiment
using Pseudomonas aeruginosa detritus as a substrate. To assess the effects of natural marine microbial communities on degradation and utilization of
protein derived from P. aeruginosa cells, four microcosms were prepared: natural seawater (containing the natural microbial community) with P. aeruginosa detritus (N+Pa), autoclaved seawater with P. aeruginosa detritus (A+Pa), natural seawater (N) and autoclaved seawater (A) without adding anything as a control. The numbers of total
and growing bacterial cells, protease activity, and transition of P. aeruginosa proteins were monitored in the four microcosms. Changes in the numbers of total and growing bacterial cells and protease
activities indicated that bacterial detritus significantly stimulated the microbial community in the microcosms. Both the
surviving P. aeruginosa in A+Pa and natural microbial community in N+Pa microcosms were able to degrade and utilize P. aeruginosa detritus; however, the community in N+Pa including various microbes maintained high activity longer, indicating that diversity
is an important factor in keeping the community active. Even under the very high protease activity in N+Pa, 39-kDa and 48-kDa
proteins from P. aeruginosa remained in the microcosm during the entire experiment (150 days). Immunoblotting suggested the 48-kDa protein was an intact
molecule of OprP, which had been detected from the dissolved fraction of natural seawater in previous studies. This result
suggests that the protein molecules that had been detected from natural seawater actually had a high tolerance to microbial
degradation. 相似文献
16.
Kazunari Ogawa 《Journal of Oceanography》1974,30(2):54-60
Some experiments were carried out to explain thein situ phenomena that the number of coliform organisms decreased rapidly from estuaries to offshore, and also at deeper layer, and that the appearance of coliform types varied.In natural seawater, experimental results did not show thatEscherichia coli was extinct by self-purification or anti-biosis action of seawater, but it showed that this organism decreased mainly because of their starvation caused by lack of nourishment. Although the decreasing rate of bacterial density was delayed in enriched seawater, addition of nutrient even at the time of bacterial extinction promoted the appearance of variated form of this bacteria with floc formation.Flocculation of bacterial cells was influenced by quality and quantity of added nutrients. Temperature was shown to have an effect on the floc formation, but appearance of variated form in flocculated cells ofE. coli was not affected by temperature. Flocculated particles of coliform bacteria were adsorbed on suspended particles in seawater and precipitated rapidly. This phenomenon seems to be a cause of the rapid disappearance of coliform bacteria in coastal waters.In bottom deposits the coliform bacteria probably survive longer as physiologically variated forms when suitable nutrients were supplied. 相似文献
17.
采用3H-TdR同位素示踪方法研究了环境因子对溶藻弧菌对大黄鱼表皮粘液粘附作用的影响。试验结果表明,溶藻弧菌能很好地粘附于大黄鱼表皮粘液,其粘附量在菌浓度不超过6.52×108cfu/ml情况下随菌浓度的升高而升高;粘附量在25℃下孵育180min趋于饱和,在180min以内与孵育时间呈正相关关系;粘附作用在温度25—30℃、pH值偏酸、盐度35条件下较强;在无Na (盐度为0)时,无粘附作用;Ca2 能显著加强溶藻弧菌的粘附作用,而Mg2 作用不明显。这些结果表明,溶藻弧菌对大黄鱼表皮粘液有较强的粘附作用,其粘附作用受温度、盐度、pH值等环境因子的影响。 相似文献
18.
Peter Goldfarb J.Andy Spry Deborah Dunn David Livingstone Alan Wiseman G.Gordon Gibson 《Marine environmental research》1989,28(1-4)
In this study we have used cloned gene probes for human glutathione peroxidase (GPX), rat cytochrome P-450IVA1 and rat cytochrome P-450IIE1 to detect homologous sequences in RNA from the hepato-pancreas of Mytilus edulis. The presence of sequences hybridising to the GPX and P-450IVA1 probes, but not to the P-450IIE1 probe, confirms the ancient origin of the former genes and indicates that conserved-sequence DNA probes from higher organisms can be used to examine the structure and function of genes of environmental interest in marine organisms. 相似文献
19.
Marylyn D. Cooke 《新西兰海洋与淡水研究杂志》2013,47(3):391-397
Coliform and faecal coliform bacteria isolated from potable water supplies (springs and wells), streams, seawater, and effluents were examined for the incidence of antibiotic resistance. More than 40% of the coliform and faecal coliform bacteria isolated from drinking water supplies were resistant to one or more antibiotics. In stream and seawater samples, the incidence was increased to more than 60%, and to more than 70% among faecal coliforms isolated from effluents. Approximately 40% of the isolates resistant to streptomycin or tetra‐cycline were able to transfer their resistance determinants to an antibiotic‐sensitive strain of Escherichia coli within 2 h. Although the widespread use of antibiotics is perhaps the major selective force favouring the increased incidence of antibiotic‐resistant bacteria, antibiotic‐resistant faecal coliforms may also have a selective advantage in natural waters. 相似文献
20.
中国对虾幼体致病菌哈维氏弧菌的分离及其生物学特性研究 总被引：9，自引：1，他引：8
于1996年4—5月,在青岛丰城地区一些对虾育苗场发生大规模爆发性传染病,主要感染中国对虾幼体,尤其是蚤状幼体。死亡率高达80％以上。从自然发病及人工感染患病濒死中国对虾幼体中分离出38株细菌,研究其形态特征,生理、生化特性及对中国对虾幼体的致病性。结果表明,38株分离物均为革兰氏阴性杆菌,菌体为杆状或短杆状,极生单鞭毛运动,不发光,氧化酶呈阳性,发酵葡萄糖产酸,TCBS平板上生长,菌落呈黄色或绿色,对弧菌抑制剂0／129（150g／ml）敏感,此均为弧菌属的典型特征,属于弧菌。其中26株细菌被归为同一类群,参照伯杰氏细菌学鉴定手册（1994年,第9版）鉴定表明,该菌同哈维氏弧菌（Vibrioharveyi）最为接近;另外,Biolog系统鉴定表明也为哈维氏弧菌,因此定名为哈维氏弧菌。利用浸泡感染法以2．5×103—2.5×107cfu／ml浓度的细菌感染不同发育时期（无节幼体期、蚤状期、糠虾期和仔虾期）的中国对虾幼体。结果表明,该病原菌主要感染中国对虾幼体的无节幼体晚期、蚤状期和糠虾早期并导致其大量死亡,而在仔虾期感染死亡率较低,并且2．5×104cfu／ml以上浓度的病原菌即可导致蚤状幼体严重感染死亡,由此可见,所分离的致病菌对中国对虾蚤状期幼体具有较强的致病力。人工感染试验结果 相似文献