Microbial photosynthesis in coral reef sediments (Heron Reef, Australia)     

Ursula Werner  Anna Blazejak  Paul Bird  Gabriele Eickert  Raphaela Schoon  Raeid M.M. Abed  Andrew Bissett  Dirk de Beer   《Estuarine, Coastal and Shelf Science》2008,76(4):876-888

We investigated microphytobenthic photosynthesis at four stations in the coral reef sediments at Heron Reef, Australia. The microphytobenthos was dominated by diatoms, dinoflagellates and cyanobacteria, as indicated by biomarker pigment analysis. Conspicuous algae firmly attached to the sand grains (ca. 100 μm in diameter, surrounded by a hard transparent wall) were rich in peridinin, a marker pigment for dinoflagellates, but also showed a high diversity based on cyanobacterial 16S rDNA gene sequence analysis. Specimens of these algae that were buried below the photic zone exhibited an unexpected stimulation of respiration by light, resulting in an increase of local oxygen concentrations upon darkening. Net photosynthesis of the sediments varied between 1.9 and 8.5 mmol O₂ m⁻² h⁻¹ and was strongly correlated with Chl a content, which lay between 31 and 84 mg m⁻². An estimate based on our spatially limited dataset indicates that the microphytobenthic production for the entire reef is in the order of magnitude of the production estimated for corals. Photosynthesis stimulated calcification at all investigated sites (0.2–1.0 mmol Ca²⁺ m⁻² h⁻¹). The sediments of at least three stations were net calcifying. Sedimentary N₂-fixation rates (measured by acetylene reduction assays at two sites) ranged between 0.9 to 3.9 mmol N₂ m⁻² h⁻¹ and were highest in the light, indicating the importance of heterocystous cyanobacteria. In coral fingers no N₂-fixation was measurable, which stresses the importance of the sediment compartment for reef nitrogen cycling.  相似文献   

Spatial and temporal patterns of seagrass habitat use by fishes at the Ryukyu Islands,Japan     

Yohei Nakamura  Makoto Tsuchiya 《Estuarine, Coastal and Shelf Science》2008

To investigate whether or not regional–temporal patterns of seagrass habitat use by fishes existed at the Ryukyu Islands (southern Japan), visual surveys were conducted in seagrass beds and adjacent coral reefs in northern, central, and southern Ryukyu Islands, in November 2004, and May, August, and November 2005, the northern region having less extensive seagrass beds compared with the central and southern regions. During the study period, the seagrass beds were utilized primarily by 31 species, the densities of some of the latter differing significantly among regions. With the exception of Apogonidae and Holocentridae, all species were diurnal and could be divided into 6 groups based on seagrass habitat use patterns; (1) permanent residents A (10 species, e.g. Stethojulis strigiventer), juveniles and adults living in seagrass beds as well as other habitats; (2) permanent residents B (5 species, e.g. Calotomus spinidens), juveniles and adults living only or mainly in seagrass beds; (3) seasonal residents A (4 species, e.g. Cheilodipterus quinquelineatus), juveniles living in seagrass beds as well as other habitats; (4) seasonal residents B (6 species, e.g. Lethrinus atkinsoni), juveniles living only or mainly in seagrass beds; (5) transients (5 species, e.g. Parupeneus indicus), occurring in seagrass beds in the course of foraging over a variety of habitats; and (6) casual species (1 species, Acanthurus blochii), occurring only occasionally in seagrass beds. Regarding temporal differences, juvenile densities in each group were high in May and August compared with November in each region, whereas adult densities did not differ drastically in each month. For regional differences, juvenile and adult densities of permanent residents A and B were higher in the southern and central regions than in the northern region. Moreover, some seasonal residents showed possible ontogenetic habitat shift from seagrass beds to coral reefs in each region. These results indicated that seagrass habitat use patterns by fishes changed temporally and regionally and there may be habitat connectivity between seagrass beds and coral reefs via ontogenetic migration in the Ryukyu Islands.  相似文献   

Diurnal variability in turbidity and coral fluorescence on a fringing reef flat: Southern Molokai,Hawaii     

Gregory A. Piniak  Curt D. Storlazzi 《Estuarine, Coastal and Shelf Science》2008

Terrigenous sediment in the nearshore environment can pose both acute and chronic stresses to coral reefs. The reef flat off southern Molokai, Hawaii, typically experiences daily turbidity events, in which trade winds and tides combine to resuspend terrigenous sediment and transport it alongshore. These chronic turbidity events could play a role in restricting coral distribution on the reef flat by reducing the light available for photosynthesis. This study describes the effects of these turbidity events on the Hawaiian reef coral Montipora capitata using in situ diurnal measurements of turbidity, light levels, and chlorophyll fluorescence yield via pulse-amplitude-modulated (PAM) fluorometry. Average surface irradiance was similar in the morning and the afternoon, while increased afternoon turbidity resulted in lower subsurface irradiance, higher fluorescence yield (ΔF/F_m^′), and lower relative electron transport rates (rETR). Model calculations based on observed light extinction coeffecients suggest that in the absence of turbidity events, afternoon subsurface irradiances would be 1.43 times higher than observed, resulting in rETR for M. capitata that are 1.40 times higher.  相似文献   

Climate change and coral reef bleaching: An ecological assessment of long-term impacts,recovery trends and future outlook   总被引：2，自引：0，他引：2  

Andrew C. Baker  Peter W. Glynn  Bernhard Riegl 《Estuarine, Coastal and Shelf Science》2008

Since the early 1980s, episodes of coral reef bleaching and mortality, due primarily to climate-induced ocean warming, have occurred almost annually in one or more of the world's tropical or subtropical seas. Bleaching is episodic, with the most severe events typically accompanying coupled ocean–atmosphere phenomena, such as the El Niño-Southern Oscillation (ENSO), which result in sustained regional elevations of ocean temperature. Using this extended dataset (25+ years), we review the short- and long-term ecological impacts of coral bleaching on reef ecosystems, and quantitatively synthesize recovery data worldwide. Bleaching episodes have resulted in catastrophic loss of coral cover in some locations, and have changed coral community structure in many others, with a potentially critical influence on the maintenance of biodiversity in the marine tropics. Bleaching has also set the stage for other declines in reef health, such as increases in coral diseases, the breakdown of reef framework by bioeroders, and the loss of critical habitat for associated reef fishes and other biota. Secondary ecological effects, such as the concentration of predators on remnant surviving coral populations, have also accelerated the pace of decline in some areas. Although bleaching severity and recovery have been variable across all spatial scales, some reefs have experienced relatively rapid recovery from severe bleaching impacts. There has been a significant overall recovery of coral cover in the Indian Ocean, where many reefs were devastated by a single large bleaching event in 1998. In contrast, coral cover on western Atlantic reefs has generally continued to decline in response to multiple smaller bleaching events and a diverse set of chronic secondary stressors. No clear trends are apparent in the eastern Pacific, the central-southern-western Pacific or the Arabian Gulf, where some reefs are recovering and others are not. The majority of survivors and new recruits on regenerating and recovering coral reefs have originated from broadcast spawning taxa with a potential for asexual growth, relatively long distance dispersal, successful settlement, rapid growth and a capacity for framework construction. Whether or not affected reefs can continue to function as before will depend on: (1) how much coral cover is lost, and which species are locally extirpated; (2) the ability of remnant and recovering coral communities to adapt or acclimatize to higher temperatures and other climatic factors such as reductions in aragonite saturation state; (3) the changing balance between reef accumulation and bioerosion; and (4) our ability to maintain ecosystem resilience by restoring healthy levels of herbivory, macroalgal cover, and coral recruitment. Bleaching disturbances are likely to become a chronic stress in many reef areas in the coming decades, and coral communities, if they cannot recover quickly enough, are likely to be reduced to their most hardy or adaptable constituents. Some degraded reefs may already be approaching this ecological asymptote, although to date there have not been any global extinctions of individual coral species as a result of bleaching events. Since human populations inhabiting tropical coastal areas derive great value from coral reefs, the degradation of these ecosystems as a result of coral bleaching and its associated impacts is of considerable societal, as well as biological concern. Coral reef conservation strategies now recognize climate change as a principal threat, and are engaged in efforts to allocate conservation activity according to geographic-, taxonomic-, and habitat-specific priorities to maximize coral reef survival. Efforts to forecast and monitor bleaching, involving both remote sensed observations and coupled ocean–atmosphere climate models, are also underway. In addition to these efforts, attempts to minimize and mitigate bleaching impacts on reefs are immediately required. If significant reductions in greenhouse gas emissions can be achieved within the next two to three decades, maximizing coral survivorship during this time may be critical to ensuring healthy reefs can recover in the long term.  相似文献   

Genetic structure of the tall sea pen Funiculina quadrangularis in NW Scottish sea lochs          下载免费PDF全文

Erin P. Wright  Kirsty Kemp  Alex D. Rogers  Chris Yesson 《Marine Ecology》2015,36(3):659-667

The tall sea pen Funiculina quadrangularis has a patchy distribution around the UK, being found in sheltered waters below 20 m depth on the northwest coast of Scotland and Ireland. The limited distribution and sensitivity to bottom fishing activities make F. quadrangularis vulnerable to reduction in population numbers that may lead to genetic isolation and reduced diversity. Because of this vulnerability and low resilience to physical disturbance, the tall sea pen is recognised as a Species of Principle Importance under the Natural Environment and Rural Communities Act, 2006, UK. ( http://www.legislation.gov.uk/ukpga/2006/16/contents ) and is also on the Biodiversity Action Plan list of Priority Species for the UK. In the Mediterranean it is recognised as a sensitive and essential fish habitat because it forms habitat for several commercially important crustaceans. The aim of this study was to understand the current state of the genetic structure and gene flow of F. quadrangularis in areas of NW Scotland. We developed 10 microsatellite markers and used them to genotype 176 samples from four populations. Overall, our results suggest that there is high genetic diversity and high gene flow between colonies of F. quadrangularis in and among locations in Loch Linnhe and Loch Duich. As a result of the high rates of gene flow, genetic differentiation between sites was low. This may provide resilience to human impacts if distant populations have a high connectivity. However, care must be taken, as small but significant isolation by distance was found between the most geographically distant sites and only a small part of the species range was examined in this study. The genetic tools developed here will provide a foundation for wider studies of this vulnerable species.  相似文献   

Ecohydrographic constraints on biodiversity and distribution of phytoplankton and zooplankton in coral reefs of the Red Sea,Saudi Arabia          下载免费PDF全文

Benjamin Kürten  Hisham S. Khomayis  Reny Devassy  Saskia Audritz  Ulrich Sommer  Ulrich Struck  Mohsen M. El‐Sherbiny  Ali M. Al‐Aidaroos 《Marine Ecology》2015,36(4):1195-1214

An integral concept of ecological research is the constraint of biodiversity along latitudinal and environmental gradients. The Red Sea features a natural example of a latitudinal gradient of salinity, temperature and nutrient richness. Coral reefs along the Red Sea coasts are supported with allochthonous resources such as oceanic and neritic phytoplankton and zooplankton; however, relatively little is known about how the ecohydrography correlates with plankton biodiversity and abundance. In this article we present the biodiversity of phytoplankton and zooplankton in Red Sea coral reefs. Oceanographic data (temperature, salinity), water samples for nutrient analysis, particulate organic matter, phytoplankton and zooplankton, the latter with special reference to Copepoda (Crustacea), were collected at nine coral reefs over ~1500 km distance along the Red Sea coast of Saudi Arabia. The trophic state of ambient waters [as indicated by chlorophyll a (Chl a)] changed from strong oligotrophy in the north to mesotrophy in the south and was associated with increasing biomasses of Bacillariophyceae, picoeukaryotes and Synechococcus as indicated by pigment fingerprinting (CHEMTAX) and flow cytometry. Net‐phytoplankton microscopy revealed a Trichodesmium erythraeum (Cyanobacteria) bloom north of the Farasan Islands. Several potentially harmful algae, including Dinophysis miles and Gonyaulax spinifera (Dinophyceae), were encountered in larger numbers in the vicinity of the aquaculture facilities at Al Lith. Changes in zooplankton abundance were mainly correlated to the phytoplankton biomass following the latitudinal gradient. The largest zooplankton abundance was observed at the Farasan Archipelago, despite high abundances of copepodites, veligers (Gastropoda larvae) and Chaetognatha at Al Lith. Although the community composition changed over latitude, biodiversity indices of phytoplankton and zooplankton did not exhibit a systematic pattern. As this study constitutes the first current account of the plankton biodiversity in Red Sea coral reefs at a large spatial scale, the results will be informative for ecosystem‐based management along the coastline of Saudi Arabia.  相似文献   

Emerging coral diseases: a temperature‐driven process?          下载免费PDF全文

Aaron W. Miller  Laurie L. Richardson 《Marine Ecology》2015,36(3):278-291

In the last few decades there has been a surge in research focusing on coral disease. While climate change, specifically rising sea surface temperature, has been proposed as a major and growing driver of the emergence of marine diseases, to date a solid connection between disease epizootics and elevated sea surface temperature has not been established. However, a wealth of data now exists, compiled from many different perspectives, that may support such a connection. In this work we provide a comprehensive review targeting one coral disease, black band disease, that spans the infection process, pathobiology, and epizootiology, and links specific mechanisms of the disease process to increasing temperatures. This temperature‐driven pattern of infection can be expanded to include similar processes associated with other temperature‐related coral diseases. The conclusions presented here are based upon the results of many studies using a diverse suite of approaches that have been synthesized to argue that the emergence and continuing spread of black band disease is linked to warming sea surface temperatures. In summary, as global ocean temperatures increase seasonally and over decades, the environment shifts to become more favorable for the growth of potentially pathogenic microorganisms endemic to the immediate environment of the reef. The increase in the relative number of potential pathogens in the microbial community produces microenvironments conducive to the growth of other potential pathogens, leading to infection by a polymicrobial consortium. This consortium is easily perturbed by a (seasonal) temperature decrease, but remains associated with the coral host and can be reactivated with a subsequent seasonal increase in temperature, resulting in a cycle of temperature‐dependent disease emergence.  相似文献   

海南岛三亚珊瑚礁区大型底栖动物群落特征   总被引：5，自引：1，他引：4  

董栋  李新正  王洪法  张宝琳  寇琦  甘志彬  许鹏 《海洋科学》2015,39(3):83-91

为了解海南省三亚市3个典型珊瑚礁区的底栖生物群落现状,并依此反映该区域珊瑚礁生态系统的健康现状和受扰动程度,作者于2011年11月22日~23日在海南岛三亚西岛、鹿回头和亚龙湾3个珊瑚礁自然保护区内采用潜水方法采集底栖动物,并对分析群落的物种组成、优势类群、丰度、生物量、Shannon-Wiener指数、物种丰富度指数和物种均匀度指数以及生物量/丰度比较曲线特征等进行研究。结果共获得三亚珊瑚礁大型底栖动物166种,优势类群为甲壳动物,优势种为珊瑚铠甲虾(Galathea coralliophilus)。调查区底栖动物平均栖息丰度为566.29个/m2,平均生物量为82.146 g/m2;Shannon-Wiener指数、物种丰富度指数和均匀度指数的平均值分别为3.0581、7.9116和0.8494。其中亚龙湾的上述3项指数均高于其他两个采样地点。生物量/丰度比较曲线表明亚龙湾的底栖群落最稳定,受扰动程度最小。  相似文献   

Reef fishes recruited at midwater coral nurseries consume biofouling and reduce cleaning time in Seychelles,Indian Ocean     

S Frias-Torres  H Goehlich  C Reveret  PH Montoya-Maya 《African Journal of Marine Science》2015,37(3):421-426

In coral reef restoration, coral gardening involves rearing coral fragments in underwater nurseries prior to transplantation. These nurseries become fish-aggregating devices and attract biofouling. We hypothesised that: (1) the presence of corals at a nursery is critical to recruit fish assemblages and (2) the recruited fish assemblages control biofouling, reducing person-hours invested in nursery cleaning. Three midwater coral nurseries were deployed at 8?m depth for 27 months within the marine protected area of Cousin Island Special Reserve, Seychelles, Indian Ocean. Each nursery consisted of a 6?m×6?m PVC pipe frame, layered with a recycled 5.5-cm-mesh tuna net. Human cleaning effort was calculated based on daily dive logs. Nursery-associated fish assemblages and behaviour were video-recorded prior to harvesting corals after a 20-month growth period and seven months post-coral harvesting. The density (ind. m–2) of blue-yellow damselfish Pomacentrus caeruleus was 12–16 times higher when corals were present than when corals were absent at the nurseries. Fish assemblages recruited into the nurseries included three trophic levels, from herbivores to omnivores, in six families: Ephippidae, Pomacentridae, Labridae (Scarinae), Gobiidae, Siganidae and Monacanthidae. Higher abundance of large fish (total number of individuals) resulted in 2.75 times less person-hours spent in nursery cleaning. These results have important implications for cost-effective coral reef restoration.  相似文献   

Diagenetic formation of gypsum and dolomite in a cold‐water coral mound in the Porcupine Seabight,off Ireland     

HANS PIRLET  LAURA M. WEHRMANN  BENJAMIN BRUNNER  NORBERT FRANK  JAN DEWANCKELE  DAVID VAN ROOIJ  ANNELEEN FOUBERT  RUDY SWENNEN  LIEVEN NAUDTS  MATTHIEU BOONE  VEERLE CNUDDE  JEAN‐PIERRE HENRIET 《Sedimentology》2010,57(3):786-805

Authigenic gypsum was found in a gravity core, retrieved from the top of Mound Perseverance, a giant cold‐water coral mound in the Porcupine Basin, off Ireland. The occurrence of gypsum in such an environment is intriguing, because gypsum, a classic evaporitic mineral, is undersaturated with respect to sea water. Sedimentological, petrographic and isotopic evidence point to diagenetic formation of the gypsum, tied to oxidation of sedimentary sulphide minerals (i.e. pyrite). This oxidation is attributed to a phase of increased bottom currents which caused erosion and enhanced inflow of oxidizing fluids into the mound sediments. The oxidation of pyrite produced acidity, causing carbonate dissolution and subsequently leading to pore‐water oversaturation with respect to gypsum and dolomite. Calculations based on the isotopic compositions of gypsum and pyrite reveal that between 21·6% and 28·6% of the sulphate incorporated into the gypsum derived from pyrite oxidation. The dissolution of carbonate increased the porosity in the affected sediment layer but promoted lithification of the sediments at the sediment‐water interface. Thus, authigenic gypsum can serve as a signature for diagenetic oxidation events in carbonate‐rich sediments. These observations demonstrate that fluid flow, steered by environmental factors, has an important effect on the diagenesis of coral mounds.  相似文献