Diversity and bioactivity of actinomycetes from marine sediments of the Yellow Sea     

Shumin Zhang  Liang Ye  Xuexi Tang 《中国海洋大学学报(英文版)》2012,11(1):59-64

Among the 116 actinomycetes collected from marine sediments of the Yellow Sea,56 grew slowly and appeared after 2?3 weeks of incubation.Among the 56 strains,only 3 required seawater(SW) for growth,and 21 grew well in the medium prepared with SW rather than distilled water(DW),while the remaining 32 grew well either with SW or with DW.Six representatives with different morphological characteristics,including 1 SW-requiring strain and 5 well-growing with SW strains,were selected for phy-logenetic analysis based on 16S rRNA gene.Two strains belong to Micrococcaceae and Nocardiopsaceae respectively.The other 4 strains belong to the family of Streptomycetaceae.In the analyzed 6 strains,one was related to Nocardiopsis spp.and the other three were related to Streptomyces spp.,representing new taxa.Bioactivity testing of fermentation products from 3 SW-requiring strains and 21 well-growing with SW strains revealed that 17 strains possessed remarkable activities against gram-positive pathogen or/and tumor cells,suggesting that they were prolific resources for natural drug discovery.  相似文献   

地下水中锰离子氧化细菌的分离与筛选鉴定   总被引：1，自引：0，他引：1  

路杨  刘相国  杨朔  宁波  张晓英  郝东云 《吉林大学学报(地球科学版)》2009,39(6)

从沈阳张士经济开发区净水厂的成熟生物滤池中,分离筛选得到了3株具有较强Mn~(2+)氧化能力的革兰氏阴性细菌,分别命名为Mn1、Mn2和Mn3.经3个菌株的16S rDNA鉴定及其系统发育学分析表明,菌株Mn1和Mn2为Delftia属,菌株Mn3为Klebsiella属.进一步考察了3株菌对地下水中浓度为2 mg/L的Mn~(2+)氧化及发酵能力.结果表明,3株菌均可在12 h内达到使1 m~3生物滤料成熟时所需的最少生物量;且Mn1、Mn2和Mn3对Mn~(2+)的相对氧化能力分别为96%、94%和85%,为生物滤池法去除地下水中铁锰的快速启动提供了菌种基础.  相似文献   

Molecular identification of a species in genus Nannochloropsis     

Si Li  Kehou Pan  Baohua Zhu  Xiaolei Ma  Xin Liang  Guanpin Yang 《中国海洋大学学报(英文版)》2011,10(4):391-396

  相似文献   

基于线粒体Cytb基因的10种石珊瑚的系统发育关系     

刘丽  陈育盛  李晓娜  申玉春  刘楚吾 《广东海洋大学学报》2011,31(1):6-11

通过PCR扩增直接测序得到10种徐闻石珊瑚线粒体Cyt b基因部分序列,分析其碱基组成和变异频率,并采用Neighbor-Joining和Maximum Parsimony法构建系统发育树。结果显示:序列中A+T比例为61.0%,G+C比例为39.0%,前者明显高于后者,碱基替换主要发生在密码子第3位;滨珊瑚科分类与传统分类存在一定差异,揭示传统形态学分类可能受珊瑚骨骼生长可塑性限制,造成分类不准确;刺柄珊瑚属与蜂巢珊瑚科各属亲缘关系较近。  相似文献   

海胆相关菌株抗菌活性筛选及其生物学特性          下载免费PDF全文

黄苛  刘祝祥  陈奇辉  贺建武  粟银  张丽  陈义光 《海洋科学》2011,35(8):25-31

以8个菌株（3株革兰氏阳性菌、3株革兰氏阴性菌和2株真菌）作为指示菌,采用管碟法对分离自南海硇洲岛马粪海hP-（Hemicentrotuspulcherrimus）中的106株细菌（含放线菌）进行抗菌活性筛选,并对其中抗菌活性较强的菌株进行了基于16SrRNA基因序列的系统发育分析和生物学特性研究。结果显示．具有抗菌活...  相似文献   

聚类分析成图新方法   总被引：1，自引：1，他引：0       下载免费PDF全文

赵应权  张刘平 《地球物理学进展》2009,24(6):2287-2292

常规统计分析软件在聚类分析谱系图的自动成图上,受算法和成图方式局限,成图质量较低,有时出现偏差,程序可读性和可操作性较差,硬件资源占用率偏高.虽前人对此进行了一定的研究,并提出了链式算法,但缺少成图的实施方法.本文运用模块化的软件设计思想,在链式算法的基础上,以循环迭代方式,改善了样品纵向排序方式,并用顺序归并标记的方法提取了谱系图中各线段的顶点数据,大幅简化了谱系图的绘制.解决了用字符代替线段、并类线头无法置中等问题.使得成图在质量、速度上得到了较大的提升,对硬件资源的占用率也大大降低.  相似文献   

Molecular phylogenetic analysis of sulfate-reducing bacteria from deep sediment layers of the tropical West Pacific warm pool     

LUO Zhuhu  YE Dezan  HUANG Xiangling 《海洋学报(英文版)》2006,25(3):98-107

1IntroductionThe tropical West Pacific warm pool(TWP-WP),which spans an area roughly between10°Nto10°S of the equator from Indonesia to the dateline,has the world’s warmest sea surface temperature ofbeing greater than29℃.With the increase of recog-niz…  相似文献   

Effects of current climate,paleo-climate,and habitat heterogeneity in determining biogeographical patterns of evergreen broad-leaved woody plants in China   总被引：1，自引：1，他引：0  

Xu  Yue  Shen  Zehao  Ying  Lingxiao  Zang  Runguo  Jiang  Youxu 《地理学报(英文版)》2019,29(7):1142-1158

Journal of Geographical Sciences - Understanding biogeographic patterns and the mechanisms underlying them has been a main issue in macroecology and biogeography, and has implications for...  相似文献   

Isolation, distribution and evaluation of cytotoxic and antioxidant activity of cultivable actinobacteria from the Oman Sea sediments     

Gozari Mohsen  Bahador Nim  Jassbi Amir Rez  Mortazavi Mohammad Seddiq  Hamzehei Sam  Eftekhar Ebrahim 《海洋学报(英文版)》2019,38(12):84-90

Screening bioactive natural products from bacteria is a determinative step in the drug discovery programs. The present study aim to isolate actinobacteria from the Oman Sea sediments for determining the effects of different culture media and treatments on the yield of the isolation process, and measure the DPPH radical scavenging and Artemia cytotoxic activity of culture extracts of the actinobacterial isolates. A total of 290 actinobacterial isolates were collected from 14 sediment samples. Heat treatment(40.68%) and M_4 medium(29.31%) exhibited the maximum isolation rates of actinobacteria. Streptomyces isolates were dominantly distributed in all of the investigated stations according to 16 S rRNA gene sequencing. The distribution pattern of Streptomyces followed a depth-dependent frequency trend, whereas the members of rare genera including Micromonospora, Nocardia Actinoplanes, Nocardiopsis, Saccharopolyspora and Crossiella were distributed in deeper stations. Approximately,25% of the examined isolates could scavenge 90% of 10~(–4) mol/L DPPH solutions at 1 250 μg/mL final concentration of their ethyl acetate culture extracts. Furthermore, the most potent extracts could scavenge DPPH radicals with IC50 ranges from 356.8 to 566.4 μg/mL. Brine shrimp cytotoxicity tests showed that 38.88% of the examined culture extracts exhibited LC_(50) lower than 1 000 μg/mL against the Artemia cells. Moreover, the most potent culture extracts exhibited LC_(50) range from 335.4 to 534.4 μg/mL. Phylogenetic analysis by 16 S rRNA gene sequence revealed that the OS 005, OS 263 and OS 157 closely related to Streptomyces djakartensis, Streptomyces olivaceus and Nocardiopsis dassonvillei respectively. These results suggested the widespread distribution of the antioxidant and cytotoxic producing actinobacteria in the Oman Sea sediments, which could be considered as promising candidates for the discovery of microbial bioactive compounds.  相似文献   

Genetic variability of the Lessepsian migrant mussel Brachidontes pharaonis (Bivalvia: Mytilidae) in Tunisia     

M Antit  J Urra  AN Alagaili  S Farjallah 《African Journal of Marine Science》2018,40(2):211-217

The present study used two mitochondrial markers (16S rRNA and COI) to assess the genetic diversity of a newly founded Lessepsian migrant mussel, Brachidontes pharaonis, in Tunisian waters. The species appears to be restricted to only one population in Rades Harbour, in the northern part of the country. Phylogenetic analyses revealed the monophyly of B. pharaonis in Tunisia. Both molecular markers revealed high genetic variability of the B. pharaonis population. Haplotype networks and demographic analyses confirmed the recent expansion events within this population. Multiple human-mediated introduction events involving several founder populations and intensive population growth rates are probably the main causes of the high polymorphism observed within this invasive mollusc.  相似文献