cDNA cloning and expression of a collectin from red-spotted grouper （Epinephelus akaara）     

张之文  丁少雄  王颖  毛勇  苏永全  王军 《中国海洋湖沼学报》2009,27(3):543-549

Lectins play a crucial role in the innate immunity of invertebrates and vertebrates by recognizing and disposing of pathogens.We obtained the complete cDNA of a C-type lectin(EALec1) from Epinephelus akaara using RACE.The complete EALec1 cDNA sequence was 827 bp.The 5-UTR and 3-UTR were 28 bp and 151 bp,respectively,in length.The sequence also contained a polyadenylation signal AATAAA and a poly(A) tail.The EALec1 cDNA encodes polypeptides with 215 amino acids,including a signal peptide of 31 amino acids.Th...  相似文献   

Molecular cloning and expression analysis of Crustin-like gene from Chinese shrimp Fenneropenaeus chinensis     

LIU Fengsong  LI Fuhu  XIANG Jianhai  DONG Bo  LIU Yichen  ZHANG Xiaojun  ZHANG Liusuo 《海洋学报(英文版)》2008,27(2):81-92

A new member of antimicrobial protein genes of the Crustin family was cloned from haemocytes of the Chinese shrimp Fennero- penaeus chinensis by 3 ′and 5′ RACE. The full-length cDNA of Crustin-like gene contains a 390 bp open reading frame, encoding 130 amino acids. The deduced peptide contains a putative signal peptide of 17 amino acids and mature peptide of 113 amino acids. The molecular mass of the deduced mature peptide is 12. 3 ku. It is highly cationic with a theoretical isoelectric point of 8.5. The deduced amino acids sequence of this Crustin showed high homology with those of Penaeus （ Litopenaeus ） setferus. Northern blotting showed that the cloned Crustin gene was mainly expressed in haemocytes, gill, intestine, and RNA in situ hybridization indicated that the Crustin gene was constitutively expressed exclusively in haemocytes of these tissues. Capillary elec- trophoresis RT-PCR analysis showed that Crustin was up-regulated dramatically from 12 to 48 h after a brief decrease of mRNA during first 6 h in response to microbe infection. The level of Crustin mRNA began to restore at 72 h post-challenge. This indicated that Crustin gene might play an important role when shrimps are infected by bacterial pathogen.  相似文献   

Efficient expression of green fluorescent protein （GFP） mediated by a chimeric promoter in Chlamydomonas reinhardtii     

吴锦霞  胡章立  王潮岗  黎双飞  雷安平 《中国海洋湖沼学报》2008,26(3):242-247

To improve the expression efficiency of exogenous genes in Chlamydomonas reinhardtii, a high efficient expression vector was constructed. Green fluorescent protein （GFP） was expressed in C. reinhardtii under the control of promoters： RBCS2 and HSP70A-RBCS2. Efficiency of transformation and expression were compared between two transgenic algae： RBCS2 mediated strain Tran-Ⅰ and HSP70A-RBCS2 mediated strain Tran-Ⅱ. Results show that HSP70A-RBCS2 could improve greatly the transformation efficiency by approximately eightfold of RBCS2, and the expression efficiency of GFP in Tran-Ⅱ was at least double of that in Tran-Ⅰ. In addition, a threefold increase of GFP in Tran-Ⅱ was induced by heat shock at 40℃. All of the results demonstrated that HSP70A-RBCS2 was more efficient than RBCS2 in expressing exogenous gene in C. reinhardtii.  相似文献   

Characterization of defensin gene from abalone <Emphasis Type="Italic">Haliotis discus hannai</Emphasis> and its deduced protein     

洪旭光  孙修勤  郑明刚  曲凌云  昝金东  张进兴 《中国海洋湖沼学报》2008,26(4):375-379

Defensin is one of preserved ancient host defensive materials formed in biological evolution. As a regulator and effector molecule, it is very important in animals＇ acquired immune system. This paper reports the defensin gene from the mixed liver and kidney cDNA library of abalone Haliotis discus hannai Ino. Sequence analysis shows that the gene sequence of full-length cDNA encodes 42 mature peptides （including six Cys）, molecular weight of 4 323 Da, and pI of 8.02. Amino acid sequence homology analysis shows that the peptides are highly similar （70% in common） to other insects defensin. Because of a typical insect-defensin structural character of mature peptide in the secondary structure, the polypeptide named Haliotis discus defensin （hd-def）, a novel of antimicrobial peptides, belongs to insects defensin subfamily. The RT-PCR result of Haliotis discus defensin shows that the gene can be expressed only in the hepatopancreas by Gram-negative and positive bacteria stimulation, which is ascribed to inducible expression. Therefore, it is revealed that the Haliotis discus defensin gene expression was related to the antibacterial infection of Haliotis discus hannai Ino.  相似文献   

大弹涂鱼(Boleophthalmus pectinirostris)单核巨噬细胞低氧胁迫比较转录组学分析     

朱婷芳  管峰  苗亮  史雨红  陈炯 《海洋与湖沼》2020,51(2):335-344

低氧是鱼类在水生环境中的关键压力之一。而大弹涂鱼(Boleophthalmus pectinirostris,mudskipper)可能是少数能在低氧中自然呼吸的脊椎动物。本研究中,我们分析了低氧胁迫8h后大弹涂鱼头肾源单核巨噬细胞(monocytes/macrophages,MO/MΦ)转录组变化。采用Illumina Hiseq 4000平台进行高通量测序,获得了大弹涂鱼MO/MΦ短时低氧胁迫相关的转录组数据,并将获得的原始数据上传至NCBI获得ID号:SRR9771486-SRR9771491 (Bioproject PRJNA543702)。分析结果显示,P0.05和|log2(fold change)|≥1条件下进行差异表达基因(differentially expressed genes,DEGs)筛选,低氧处理组中共获得4487个DEGs,包括2507个上调DEGs,1980个下调DEGs。其中低氧诱导因子(hypoxia-inducible factors,HIF)转录本的表达无显著变化,而血管内皮生长因子(vascular endothelial growth factor-A.VEGF-A)和3-磷酸甘油醛脱氢酶(glyceraldehyde 3-phosphate dehydrogenase,GAPDH)基因转录本表达上调。基因本体(Gene Ontology,GO)注释以及京都基因和基因组百科全书(Kyoto Encyclopedia of Genes and Genomes,KEGG)信号通路富集分析揭示了糖酵解/糖异生和氧化磷酸化可能在MO/MΦ应对短时低氧胁迫中具有重要作用。随机选择10个DEGs进行实时荧光定量PCR验证,上述基因表达变化趋势与转录组数据一致。本研究揭示了在短时低氧胁迫下大弹涂鱼MO/MΦ基因表达及信号通路调控机制。  相似文献   

LPS胁迫下五个群体菲律宾蛤仔TYR基因在鳃和肝胰腺中表达特性研究     

刘杰  聂鸿涛  姜坤银  王政兴  孙晓彤  霍忠明  闫喜武 《海洋科学》2020,44(1):81-88

为了解TYR基因与蛤仔免疫的关系,本实验利用荧光定量PCR技术研究了菲律宾蛤仔五个群体(白蛤、白斑马蛤、斑马蛤、养殖和野生群体)的鳃组织和肝胰腺组织在LPS胁迫下TYR基因在不同时间(0 h、3 h、12 h、24 h、48 h)的表达特性。结果表明,在LPS注射后鳃组织中TYR6基因表达水平在白蛤和白斑马蛤3 h、6 h、12 h,野生蛤仔3 h,斑马蛤3 h、6 h,养殖群体6 h、12 h显著上调(P0.05),3h野生蛤仔和斑马蛤达到峰值, 6 h白蛤、白斑马蛤、养殖群体达到峰值(P0.05);在肝胰腺中,养殖群体和白斑马蛤6 h,白蛤6 h、24 h,野生群体24 h,斑马蛤3 h显著上调, 3 h野生蛤仔和斑马蛤达到峰值,6h养殖群体、白蛤、白斑马达到峰值(P0.05);鳃组织中TYR10基因表达水平在白蛤、野生群体和白斑马蛤3 h,养殖群体3 h、6 h,斑马蛤3 h、12 h显著上调(P0.05),肝胰腺组织中TYR10基因表达水平在白蛤3 h,野生群体3 h、6 h、12 h,斑马蛤、养殖群体6 h显著上调(P0.05),推测TYR基因在五个菲律宾蛤仔群体的鳃和肝胰腺中参与了免疫应答。通过对TYR基因的氨基酸序列进行二级结构分析和系统发育树分析,找到两个铜离子结合位点和6个组氨酸残基,并发现TYR6基因和长牡蛎同源性最高,为39.43%, TYR10基因和大珠母贝同源性最高,为51.04%。本文首次探讨在LPS胁迫下菲律宾蛤仔TYR基因的表达特性,为进一步探究TYR基因与菲律宾蛤仔免疫应答机制提供参考。  相似文献   

海湾扇贝促性腺激素释放激素基因克隆及表达分析     

李婉茹  张玲玲  张美溦  李若佼  李仰平  郭振义  包振民 《中国海洋大学学报(自然科学版)》2020,(2):68-74

促性腺激素释放激素(Gonadotropin Releasing Hormone,GnRH)是脊椎动物下丘脑-垂体-性腺轴的关键信号分子。近年来的研究显示,GnRH也存在于贝类等无脊椎动物,且在雌雄异体性别分化与繁殖中起重要作用,然而雌雄同体贝类GnRH的研究仍处于空白。本文以海湾扇贝为研究对象,利用RACE技术克隆获得GnRH的cDNA全长序列,该基因长1335 bp,编码101个氨基酸,前体包含1个由24个氨基酸组成的信号肽以及1个具有酰胺化修饰的活性肽(QNFHYSNGWQP-amide)。GnRH在脑足神经节和脏神经节中均有表达,且在2015年10月-2016年1月,GnRH在脑足神经节中的表达量显著高于脏神经节(P<0.05);GnRH在两个神经节中的表达均呈现先上升后下降的趋势,峰值出现在11月份,推测可能与性腺发育启动有关。本研究为深入理解GnRH在贝类繁殖调控中的作用奠定了基础。  相似文献   

花鲈低氧诱导因子基因(hifs)的序列分析及低氧诱导表达     

张凯强  常志成  温海深  李吉方  齐鑫  张晓燕  李昀 《中国海洋大学学报(自然科学版)》2020,(1):39-47

低氧诱导因子基因(hifs)是由α和β构成的异源二聚体转录因子,在生物低氧应答中发挥着重要作用。本实验对花鲈4个hifs基因进行了序列分析及组织表达检测,并检测了各基因在低氧诱导后的mRNA表达变化。研究表明,通过全基因组比对、进化树分析和共线性分析,共鉴定出花鲈的4个hifs基因,分别为hif1α、hif2α、hif3α、hif1β。组织表达结果显示,hifs基因具有组织特异性表达特征。低氧((1.56±0.24)mg/L)诱导下,hifs各基因的响应时间和响应程度存在一定差异。肝组织中,低氧胁迫3和6 h后,hif1α、hif2α、hif3α和hif1β表达量均出现了显著升高,表明hifα和hif1β基因可能共同起低氧调控作用;而低氧胁迫12 h后,仅hif1α表达量显著高于对照组,表明hif1α基因在肝组织低氧调控12 h内持续起作用。鳃组织中,低氧胁迫3 h后,hif1α、hif2α、hif3α基因表达量出现了显著升高,而低氧胁迫6 h后,hif3α和hif1β基因表达量显著升高,说明在鳃组织前3h的低氧胁迫中仅hifα基因起调控作用,而6 h后hif3α和hif1β基因共同调控低氧胁迫。常氧恢复阶段肝、鳃组织中各基因表达量均与对照组无显著差异。本研究结果表明,4个hifs基因的组织表达具有特异性,同时对低氧的响应时间和程度不同,研究结果弥补了花鲈hifs基因及低氧应答研究的空白。  相似文献   

南极菌Pseudoalteromonas sp. A211-5产α-淀粉酶Amy3809的表达、性质及其降解特性          下载免费PDF全文

谷晓倩  李江  潘爱红  林学政 《海洋科学进展》2020,38(1):81-90

对具有高淀粉酶活性的南极菌Pseudoalteromonas sp. A211-5的全基因组数据进行了分析和筛选,筛选获得α-淀粉酶疑似序列amy3809,并采用基因工程手段对该基因的功能和性质进行验证和分析。首先,以淀粉酶Amy3809的完整开放阅读框(ORF)为模板设计特异引物,克隆获得amy3809的全序列并对其进行重组表达,获得的重组蛋白采用镍柱进行分离纯化;DNS-还原糖法测定重组酶的酶学性质;薄层层析(TLC)技术对Amy3809的酶解产物进行分析。实验结果:1)克隆获得的amy3809成功地连接到pET-30a载体,并在工程菌E.coli BL21(DE3)中实现了高效表达,纯化的重组酶Amy3809分子量为67 kDa;2)重组酶Amy3809在10~40℃的范围内仍能保持85%以上的酶活,但随着温度的升高酶活迅速降低,70℃时几乎失活,表明该酶具有良好的低温耐受特性及热敏感性;3)最适pH为7.0,在pH 5.0~10.0的范围内仍能保持50%以上的活性;4)金属离子Na+,K+和Ca2+均能提高Amy3809的活性,而Cu2+,Fe2+,Mg2+和EDTA则能显著降低Amy3809的活性;5)Amy3809的酶解产物主要为麦芽四糖、麦芽三糖、麦芽糖和葡萄糖。由此可知,南极菌产的α-淀粉酶Amy3809,具有良好的低温耐受特性,热敏感性和较广的pH耐受范围,并能够有效地将淀粉降解为低聚糖和葡萄糖,因而具有潜在的工业应用前景。  相似文献   

基于虚拟地理环境的室内火灾真实感可视化     

唐俊  朱军  李维炼  佘平 《地理信息世界》2019,26(3):72-76

针对现有火灾可视化表达方法不能有效集成地理信息、真实感效果不强、结果不具有真实性等问题,探讨基于火灾数值模拟计算结果进行火灾可视化表达研究的理论,形成一套基于虚拟地理环境的火灾真实感可视化与优化方法,详细探讨火灾数值模型及模拟计算结果、火灾虚拟地理环境的构建、火灾温度与可视化效果之间的映射关系、火灾真实感可视化、场景优化等关键技术。最后以一栋室内房屋为例,开展火灾虚拟地理环境构建以及真实感可视化、优化与分析试验。试验结果表明,本文方法不仅能够集成火灾真实结果信息,还能通过优化提升效率以实现较好的火灾可视化表达效果,能够支持相关人员进行火灾决策分析。  相似文献