太湖与广东汤溪水库微囊藻gyrB基因序列分析   总被引：1，自引：1，他引：0  

刘海林  章群  李名立  胡韧  雷腊梅 《湖泊科学》2010,22(2):221-226

测定了江苏太湖和广东汤溪水库7株铜绿微囊藻(M.aeruginosa)和1株水华微囊藻(M.flos-aquae)gyrB基因部分序列(974bp),发现40个变异位点,17个简约信息位点,平均(G+C)%为47.8%,序列间相似性≥97.10%.在NJ分子系统树上,不同种类的微囊藻混杂分布,表明基因型聚类与表型无直接关系;不同地理来源的铜绿微囊藻间遗传变异小,没有明显的地理聚群,反映出地理差异并不影响遗传上的相似性;支持暂将不同藻种归为铜绿微囊藻复合种的分类处理.gyrB基因对微囊藻遗传差异的解析效果优于16S rRNA,与16S-23S ITS和cpcBA-IGS等效果相当,表明gyrB基因可能成为研究微囊藻分类和遗传变异新的良好分子标记.  相似文献   

广西涠洲岛底栖甲藻前沟藻属(Amphidinium)种类的形态学和系统发育学研究     

江丽春  李群  吕颂辉 《热带海洋学报》2020,39(3):106-115

本文对采集自我国广西涠洲岛海域潮下带大型海藻及死珊瑚上的附着底栖甲藻样品进行了分析。利用毛细管单细胞分离方法成功分离并培养了多株前沟藻属种类, 运用光学显微镜、扫描电镜和分子生物学等技术, 对所获得的前沟藻株系进行形态学和系统发育分析, 鉴定出前沟藻属3个种, 分别为具盖前沟藻(Amphidinium operculatum)、玛氏前沟藻(Amphidinium massertii)和强壮前沟藻(Amphidinium caeterae), 其中具盖前沟藻和玛氏前沟藻为我国新纪录种。分析比较了不同种类间形态和系统发育的差异, 发现3种前沟藻的形态特征大体与相应模式种报道的一致。本研究丰富了我国前沟藻种类多样性和系统发育进化信息, 同时将两个新记录种具盖前沟藻和玛氏前沟藻的已知分布范围拓展到了我国南部沿海水域。  相似文献   

基于28S rRNA 基因片段的翼形亚纲(Bivalvia:Pteriomorphia) 系统发育的初步研究     

薛东秀  王海艳  张涛  张素萍  徐凤山 《海洋与湖沼》2012,43(2):348-356

采用从GenBank下载的翼形亚纲11个总科80个种类的28S部分序列,对翼形亚纲11个总科贝类进行系统发育关系研究。在获得的1252个序列位点中,去除插入缺失位点,变异位点共359个,其中简约位点300个。翼形亚纲各总科内各种间的遗传距离为0.01—0.14,明显小于各总科间的遗传距离(除蚶总科与拟锉蛤总科,双肌蛤总科与襞蛤总科以及两总科与贻贝总科外)。贝叶斯树和最大似然树均支持翼形亚纲为单系群,并将11个总科分为3个聚类簇:聚类簇Ⅰ为珍珠贝总科(Pterioidea)、牡蛎总科(Ostreoidea)和江珧总科(Pinnoidea),聚类簇Ⅱ为贻贝总科(Mytiloidea)、蚶总科(Arcoidea)和拟锉蛤总科(Limopsoidea),聚类簇Ⅲ为襞蛤总科(Plicatuloidea)、不等蛤总科(Anomioidea)、双肌蛤总科(Dimyoidea)、扇贝总科(Pectinoidea)和锉蛤总科(Limoidea)。根据本研究的结果,并结合其他学者提出的分类系统,构建了包括4目11总科的翼形亚纲分类系统。  相似文献   

尾索动物线粒体基因组特征比较及分子系统发育   总被引：1，自引：1，他引：0  

申欣  田美  孟学平  程汉良  李士虎 《海洋科学》2012,36(11):30-37

为全面揭示尾索动物线粒体基因组的基本特征,作者系统分析了12种尾索动物的线粒体基因组全序列,尾索动物线粒体基因组所有的基因均在同一链上编码,这与脊椎动物、头索动物线粒体基因组的基因分布特征显著不同.与后生动物线粒体基因组标准的基因组成相比,尾索动物线粒体基因组存在转运 RNA基因的增加以及部分物种 atp8基因的缺失.在尾索动物线粒体基因组中发生了大规模的基因重排,即使在同属物种的线粒体基因组中,也存在主编码基因的基因重排及基因缺失.尾索动物线粒体基因组蛋白质编码基因的起始密码子、终止密码子及氨基酸长度存在明显差异.2个玻璃海鞘(Ciona intestinalis 和 C. savignyi)线粒体基因组12个蛋白质编码基因的 Ka/Ks 比值都低于1(0.0927~0.6752),显示出一定的负选择.在所有的主编码基因中, nad5基因和nad4基因的变异位点最多,可以作为备选的分子标记,用于分析尾索动物不同物种之间的生物多样性.基于线粒体基因组的系统发育分析,支持尾索动物在科级的亲缘关系为:(((柄海鞘科 Pyuridae+芋海鞘科 Styelidae)+(((三段海鞘科Polyclinidae+星骨海鞘科Didemnidae)+簇海鞘科Clavelinidae)+玻璃海鞘科Cionidae))+长纹海鞘科Ascidiidae)+海樽科Doliolidae.  相似文献   

A New Subfamily of Aphids (Hemiptera,Aphidomorpha) from the Early Cretaceous Lebanese Amber with a Description of the Oldest Apterous Morphs   总被引：1，自引：1，他引：0  

Piotr Wegierek  and David A. Grimaldi 《《地质学报》英文版》2010,84(4):665-672

<正>Aphids are marked by their high polymorphism,but species reported from the Early Cretaceous are known only from alate morphs.The discovery of an apterous adult morph in Lebanese amber and a larva of the same species are very important for the understanding of both the morphological and biological evolution of this insect group at the very early stage of development.Gondvanoaphis estephani new subfamily,new genus and species of the recent aphids family Thelaxidae is described.The characters of the new genus in respect to other genera placed in Thelaxidae are reviewed.The palaeoecological and palaeogeographical data concerning Gondvanoaphis new genus are also discussed.  相似文献   

Ancient DNA sequences from Coelodonta antiquitatis in China reveal its divergence and phylogeny     

JunXia Yuan  GuiLian Sheng  XinDong Hou  XiaoYan Shuang  Jian Yi  Hong Yang  XuLong Lai 《中国科学:地球科学(英文版)》2014,57(3):388-396

Ancient DNA data have supported a sister relationship between woolly rhinoceros and extant Sumatran rhinoceros.This relationship has been used to explore the divergent times for the woolly rhinoceros from their relatives.Complete and partial ancient DNA sequences of the mitochondrial cytochrome b(cyt b)gene were retrieved from bones of the late Pleistocene Coelodonta antiquitatis excavated from northern and northeastern China.The newly obtained sequences together with the European and northern Asian Coelodonta antiquitatis sequences from GenBank were used to estimate the evolutionary divergence time.Phylogenetic analyses showed the exchange of genetic information between the Chinese individuals and Coelodonta antiquitatis of north Asia,which also indicated a more recent evolutionary timescale(3.8–4.7 Ma)than previous molecular estimations(17.5–22.8 or 21–26 Ma)for woolly rhinoceros based on the fossil calibration of outgroups.This new timescale was more consistent with the fossil record of the earliest known genus Coelodonta.  相似文献   

Molecular phylogeny of Parapenaeopsis Alcock, 1901 (Decapoda: Penaeidae) based on Chinese materials and 16S rDNA and COI sequence     

LI Xinzheng  XU Yan  and KOU Qi 《中国海洋大学学报(英文版)》2014,13(1):104-114

The phylogenetic relationship among Chinese Parapenaeopsis species was studied by comparing 16S rDNA and COI gene sequence. The results showed that Parapenaeopsis hardwickii (Miers, 1878) and P. cultrirostris Alcock, 1906 identified from Chinese samples were the same species. Parapenaeopsis cornuta (Kishinouye, 1900), P. incisa Liu and Wang, 1987, and P. sinica Liu and Wang, 1987 were different species. However, their systematic relationship were closer than those of other species, and they formed an advanced branch in the phylogenetic trees. Additionally, the systematic position of P. hardwickii (Miers, 1878), P. hungerfordi Alcock, 1905, and P. tenella (Bate, 1888) were not stable in the phylogenetic trees. More genetic markers such as 18S rDNA and 28S rDNA were supposed to be used to confirm the phylogenic relationship of Parapenaeopsis species.  相似文献   

东海多环旋沟藻的形态特征和系统进化分析   总被引：1，自引：1，他引：0  

王红霞  陆斗定  何飘霞  戴鑫烽  夏平  李冬融 《海洋与湖沼》2014,45(4):757-763

本文首次对分离自我国东海海域的多环旋沟藻(Cochlodinium polykrikoides Margalef)藻株进行了详细的分类学报道。通过运用光学显微镜、荧光显微镜、电子扫描电镜和分子生物学方法,对多环旋沟藻的形态和显微特征进行了详细的描述,并对其核糖体大亚基序列(LSU rDNA)进行了系统进化分析。该藻以单细胞或链状细胞形态存在。通常链状包括2、4、8和16个细胞。横沟宽且深围绕细胞近2圈,内含鞭毛。纵沟窄并浅紧挨着横沟延伸。具有U形顶沟,细胞核大而圆,分布在上锥的前端。叶绿体棒状,数量较多并呈簇状分布。测序获得核糖体大亚基D1—D3区序列为870bp,通过构建系统发育树和Jukes-Cantor遗传距离矩阵可知东海多环旋沟藻藻株为东亚型。  相似文献   

Comparative analysis of four essential Gracilariaceae species in China based on whole transcriptomic sequencing     

XU Jiayue  SUN Jing  YIN Jinlong  WANG Liang  WANG Xumin  LIU Tao  CHI Shan  LIU Cui  REN Lufeng  WU Shuangxiu  YU Jun 《海洋学报(英文版)》2014,33(2):54-62

  相似文献   

Comparative mitochondrial genome analysis of Varunidae and its phylogenetic implications     

Ying Zhang  Li Gong  Xinting Lu  Zengliang Miao  Lihua Jiang  Bingjian Liu  Liqin Liu  Pengfei Li  Xu Zhang  Zhenming Lü 《海洋学报(英文版)》2022,41(6):119-131

Complete mitochondrial genomes(mitogenomes) can indicate phylogenetic relationships, as well as useful information for gene rearrangement mechanisms and molecular evolution. Currently, the phylogenetic location of the genus Varuna(Brachyura: Varunidae) has not been well resolved mainly because of limited representatives(only two extant species). Here, we determined a new mitogenome of this genus(Varuna litterata) and added the published mitogenomes to reconstruct the phylogeny of Varunidae. The ...  相似文献