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1.
An introduced turbot population was used to establish families and to estimate genetic parameters of the offspring. However, there is a lack of pedigree information, and common environmental effects can be introduced when each full-sib family is raised in a single tank. Therefore, in the genetic evaluation, SSRs(simple sequence repeats) were used to reconstruct the pedigree and to calculate molecular relatedness between individuals, and the early mixed-family culture model was used to remove the impact of the common environmental effects. After100 d of early mixed culture, twenty SSRs were used to cluster 20 families and to calculate paired molecular relationships(n=880). Additive genetic matrices were constructed using molecular relatedness(MR) and pedigree reconstruction(PR) and were then applied to the same animal model to estimate genetic parameters. Based on PR, the heritabilities for body weight and body length were 0.214±0.124 and 0.117±0.141, and based on MR they were 0.101±0.031 and 0.102±0.034, respectively. Cross validation showed that the accuracies of the estimated breeding values based on MR(body weight and body length of 0.717±0.045 and 0.629±0.141, respectively) were higher than those of PR(body weight and body length of 0.692±0.052 and 0.615±0.060, respectively). The MR method ensure availability of all genotyped selection candidates, thereby improving the accuracy of the breeding value estimation.  相似文献   

2.
Cochlodinium polykrikoides is a notoriously harmful algal species that inflicts severe damage on the aquacultures of the coastal seas of Korea and Japan. Information on their expected movement tracks and boundaries of influence is very useful and important for the effective establishment of a reduction plan. In general, the information is supported by a red-tide(a.k.a algal bloom) model. The performance of the model is highly dependent on the accuracy of parameters, which are the coefficients of functions approximating the biological growth and loss patterns of the C. polykrikoides. These parameters have been estimated using the bioassay data composed of growth-limiting factor and net growth rate value pairs. In the case of the C. polykrikoides, the parameters are different from each other in accordance with the used data because the bioassay data are sufficient compared to the other algal species. The parameters estimated by one specific dataset can be viewed as locally-optimized because they are adjusted only by that dataset. In cases where the other one data set is used, the estimation error might be considerable. In this study, the parameters are estimated by all available data sets without the use of only one specific data set and thus can be considered globally optimized. The cost function for the optimization is defined as the integrated mean squared estimation error, i.e., the difference between the values of the experimental and estimated rates. Based on quantitative error analysis, the root-mean squared errors of the global parameters show smaller values, approximately 25%–50%, than the values of the local parameters. In addition, bias is removed completely in the case of the globally estimated parameters. The parameter sets can be used as the reference default values of a red-tide model because they are optimal and representative. However, additional tuning of the parameters using the in-situ monitoring data is highly required.As opposed to the bioassay data, it is necessary because the bioassay data have limitations in terms of the in-situ coastal conditions.  相似文献   

3.
In order to carry out the genetic improvement of turbot upper thermal tolerance, it is necessary to estimate the genetic parameters of UTT(upper thermal tolerance) and growth-related traits. The objective of this study was to estimate genetic parameters for BW(body weight) and UTT in a two-generational turbot(Scophthalmus maximus L.) pedigree derived from four imported turbot stocks(England, France, Denmark and Norway). A total of 42 families including 20 families from G1 generation and 22 families from G2 generation were used to test upper thermal tolerance(40–50 animals per family) in this study and the body weight of individuals were measured. The heritability of BW and UTT and the correlation between these two traits were estimated based on an individual animal model using Bayesian method based on two types of animal models with and without maternal effects.These results showed that the heritabilities for BW and UTT and phenotypic and genetic correlations between the two traits estimated from model without maternal effects were 0.239±0.141, 0.111±0.080, 0.075±0.026 and–0.019±0.011, respectively. The corresponding values from model with maternal effects were 0.203±0.115,0.055±0.026, 0.047±0.034 and –0.024±0.028, respectively. The maternal effects of BW and UTT were 0.050±0.017 and 0.013±0.004, respectively. The maternal effects had a certain influence on the genetic evaluation of the two traits. The findings of this paper provided the necessary background to determine the best selection strategy to be adopted in the genetic improvement program.  相似文献   

4.
Seagrass beds degraded significantly since the last century on both, global and local scale. The seagrass species Enhalus acoroides (Linnaeus f.) Royle is a common species found in almost all marine ecosystems including bays, lagoons and around offshore islands in tropical regions of the West Pacific. It was shown that genetic diversity is an essential indicator of the conditions of ecosystems. In the present study, microsatellite markers were used to assess the genetic diversity and population structure of six distinct seagrass beds along the coast of the Khanh Hoa Province, Vietnam. The results indicate that the genetic diversity of the populations in the open sea is higher than in the lagoon. Seagrass beds occurring in disturbed sites show reduced genetic diversity. The fixing index value (FST) depicts a relatively high genetic structure among populations. Structure analysis clusters the populations into open sea and lagoon populations and cluster analysis and AMOVA indicate a significant difference between the two groups. There are low but non-significant positive correlations between geographic and genetic distances. The different habitats of the open sea and the lagoon are probably responsible for forming two groups.  相似文献   

5.
The ovary is an excellent system for studying stem cell renewal and differentiation, which is under the control of ovarian somatic cells. In order to understand oogenesis in Fugu rubripes (Temminck et. Schlegel) as a marine fish model of aquaculture importance, we established cell lines called TSOC1 and TSOC2 from a juvenile ovary of this organism. TSOC1 is composed of spindle epithelial-like cells, while the other is cobblestone-like cells. Therefore, TSOC1 and TSOC2 appear to consist of ovarian somatic cells. Growth requirement condition was investigated including temperature, concentration of FBS and pH. Significant fluorescent signals were observed after TSOC1 and TSOC2 cells were transfected with pEGFP-N3 vector, indicating its potential utility for genetic manipulation such as gene function studies. It is shown that these cell lines are effective for infection by the turbot reddish body iridovirus and flounder lymphosystis disease virus as evidenced by the appearance of cytopathic effect and virus propagation in the virus-infected cells, and most convincingly, the observation of viral particles by electron microscopy, demonstrating that TSOC1 and TSOC2 are suitable to study interactions between virus and host cells. It is believed that TSOC1 and TSOC2 will be useful tools to study sex-related events and interactions between primordial germ cells and oogonia cells during oogenesis. Therefore, establishment of ovary cell lines from Fugu rubripes seems to be significant for those research areas.  相似文献   

6.
Bayesian and restricted maximum likelihood(REML) approaches were used to estimate the genetic parameters in a cultured turbot Scophthalmus maximus stock. The data set consisted of harvest body weight from 2 462progenies(17 months old) from 28 families that were produced through artificial insemination using 39 parent fish. An animal model was applied to partition each weight value into a fixed effect, an additive genetic effect, and a residual effect. The average body weight of each family, which was measured at 110 days post-hatching, was considered as a covariate. For Bayesian analysis, heritability and breeding values were estimated using both the posterior mean and mode from the joint posterior conditional distribution. The results revealed that for additive genetic variance, the posterior mean estimate( δ_a~2=9 320) was highest but with the smallest residual variance,REML estimates( δ_a~2=8 088) came second and the posterior mode estimate( δ_a~2=7 849) was lowest. The corresponding three heritability estimates followed the same trend as additive genetic variance and they were all high. The Pearson correlations between each pair of the three estimates of breeding values were all high,particularly that between the posterior mean and REML estimates(0.996 9). These results reveal that the differences between Bayesian and REML methods in terms of estimation of heritability and breeding values were small. This study provides another feasible method of genetic parameter estimation in selective breeding programs of turbot.  相似文献   

7.
The objective of this study was to estimate genetic parameters of body width(BW)to body length(BL)ratio(BW/BL)and of body weight traits(BWT)in turbot,and to elucidate the genetic mechanism of the two traits during ontogeny by dynamic genetic analysis.From 3 to 27 months,BW,BL and BWT of each communally stocked fish were measured every 3 months.The BW/BL ratio was measured at different sampling ages.A twotrait animal model was used for genetic evaluation of traits.The results showed that the heritability values of BW/BL ratio ranged from 0.2168 to 0.3148,corresponding to moderate heritability.The BWT heritability values ranged from 0.2702 to 0.3479 corresponding to moderate heritability.The heritability of BW/BL ratio was lower than that of BWT,except at 3 months of age.Genetic correlation between BW/BL ratio and BWT decreased throughout the measurement period.Genetic correlations were higher than the phenotypic correlations.The current results for estimating genetic parameters demonstrate that the BW/BL ratio could be used as a phenotypic marker of fast-growing turbot,and the BW/BL ratio and BWT could be improved simultaneously through selective breeding.  相似文献   

8.
基于高光谱遥感的渤海海冰厚度半经验模型   总被引：1，自引：0，他引：1  
Sea ice thickness is one of the most important input parameters for the prevention and mitigation of sea ice disasters and the prediction of local sea environments and climates. Estimating the sea ice thickness is currently the most important issue in the study of sea ice remote sensing. With the Bohai Sea as the study area, a semiempirical model of the sea ice thickness(SEMSIT) that can be used to estimate the thickness of first-year ice based on existing water depth estimation models and hyperspectral remote sensing data according to an optical radiative transfer process in sea ice is proposed. In the model, the absorption and scattering properties of sea ice in different bands(spectral dimension information) are utilized. An integrated attenuation coefficient at the pixel level is estimated using the height of the reflectance peak at 1 088 nm. In addition, the surface reflectance of sea ice at the pixel level is estimated using the 1 550–1 750 nm band reflectance. The model is used to estimate the sea ice thickness with Hyperion images. The first validation results suggest that the proposed model and parameterization scheme can effectively reduce the estimation error associated with the sea ice thickness that is caused by temporal and spatial heterogeneities in the integrated attenuation coefficient and sea ice surface. A practical semi-empirical model and parameterization scheme that may be feasible for the sea ice thickness estimation using hyperspectral remote sensing data are potentially provided.  相似文献   

9.
Simulation of the Whole Process of Ship-Bridge Collision   总被引：6，自引：0，他引：6  
LIU  Jiancheng 《中国海洋工程》2002,16(3):369-382
  相似文献   

10.
The precise and accurate knowledge of genetic parameters is a prerequisite for making efficient selection strategies in breeding programs.A number of estimators of heritability about important economic traits in many marine mollusks are available in the literature,however very few research have evaluated about the accuracy of genetic parameters estimated with different family structures.Thus,in the present study,the effect of parent sample size for estimating the precision of genetic parameters of four growth traits in clam M.meretrix by factorial designs were analyzed through restricted maximum likelihood(REML) and Bayesian.The results showed that the average estimated heritabilities of growth traits obtained from REML were 0.23–0.32 for 9 and 16 full-sib families and 0.19–0.22 for 25 full-sib families.When using Bayesian inference,the average estimated heritabilities were0.11–0.12 for 9 and 16 full-sib families and 0.13–0.16 for 25 full-sib families.Compared with REML,Bayesian got lower heritabilities,but still remained at a medium level.When the number of parents increased from 6 to 10,the estimated heritabilities were more closed to 0.20 in REML and 0.12 in Bayesian inference.Genetic correlations among traits were positive and high and had no significant difference between different sizes of designs.The accuracies of estimated breeding values from the 9 and 16 families were less precise than those from 25 families.Our results provide a basic genetic evaluation for growth traits and should be useful for the design and operation of a practical selective breeding program in the clam M.meretrix.  相似文献   

11.
为了开展大菱鲆耐高温选育工作，对其进行耐高温性状及其相关生长性状的遗传评估是非常必要的。以来源于英国、法国、丹麦和挪威4个国家的不同群体构建大菱鲆选育家系，利用F1的20个和F2的22个耐高温选育家系进行耐高温实验，统计耐高温评估指标（UTT）和相应的实验鱼体重（每个家系选取40-50尾实验鱼）。基于Gibbs抽样的贝叶斯方法，采用包含母性效应和不包含母性效应的两种动物模型，对大菱鲆耐高温（UTT）和生长性状的遗传力以及这两个性状间的遗传相关和表型相关进行分析。结果表明，基于不包含母性效应的动物模型估计的体重和耐高温性状的遗传力以及这两个性状之间的表型相关和遗传相关分别为0.239±0.141,0.111±0.080,0.075±0.026和-0.019±0.011。基于包含母性效应的动物模型估计的这4个值分别为0.203±0.115,0.055±0.026,0.047±0.034和-0.024±0.028,体重和耐高温性状的母性效应分别为0.050±0.017和0.013±0.004。母性效应对这两个性状的遗传评估有一定的影响。本文的研究结论为制订合理的大菱鲆耐高温育种规划提供了理论依据。  相似文献   

12.
SARAL carried onboard a radar altimeter that provides very precise measurements of the sea surface height (SSH). Like other altimetric missions, SARAL carries a passive microwave radiometer (PMR) for wet tropospheric correction to SSH. In the present study, new algorithms are developed for the retrieval of cloud liquid water (CLW) and total precipitable water vapor (TPW) over the global oceans from PMR measurements of the brightness temperatures. A radiative transfer and genetic algorithm based retrieval scheme is proposed for the estimation of CLW and TPW from SARAL PMR. The comparisons of CLW from PMR with independent measurements from GPM-GMI and SSMIS within and outside ±40° latitudes show correlation (R) of 0.86 and 0.83, bias of 0.7 and ?3.61?mg/cm2, and root mean square error (RMSE) of 8.42 and 8.07?mg/cm2, respectively. Similarly, TPW from PMR with GPM-GMI and SSMIS show R of 0.99 and 0.98, bias of ?0.04 and ?0.03?g/cm2 and RMSE of 0.17 and 0.17?g/cm2, respectively. The retrieval accuracy of CLW and TPW from the new algorithms is compared with these parameters provided in the SARAL geophysical data records as finished products, which showed substantial improvement in the quality of the parameters from the new algorithm.  相似文献   

13.
Stocking density is widely recognized as a critical factor in aquaculture and a potential source of long-term stress.The influence of stocking density on growth and stress response of juvenile turbot(Scophthalmus maximus, ~3–75g, initial to final weight) was examined in fish held under low(LD, ~0.21–5.31 kg/m~2, initial to final density),medium(MD, ~0.42–10.81 kg/m~2) and high stocking density(HD, ~0.63–14.27 kg/m~2) for 120 days in a recirculating aquaculture system(RAS). In this trial, the growth curve for weight of juvenile turbot in RAS, all fitted by the Schnute model. No significant difference was found in growth performance among the three densities until at the final sampling(Day 120). The final weight and body weight increase(BWI) in the HD group were significantly lower than in other groups(P0.05, weight:(75.83±2.49) g,(75.39±2.08) g,(65.72±2.86) g and BWI:(2 436.12±28.10)%,(2 421.29±4.64)%,(2 097.88±20.99)% in LD, MD and HD groups, respectively). Similarly, the specific growth rate(SGR), feed conversion ratio(FCR) and coefficient of variation for weight(CV_w) were adversely affected by high stocking density(P0.05). However, there was no difference in survival and Fulton's condition factor(K) of turbot among the different groups. Physiological analyses demonstrated a clear increase in the plasma cortisol level and an obvious decrease in growth hormone(GH) concentration in the HD group on Day120(P0.05). There was no significant effect of stocking density on plasma glucose, Cl– and protein levels. All these findings would provide a reference for selecting the optimal stocking density of juvenile turbot in RAS.  相似文献   

14.
采用微卫星分子标记技术分析验证了133对微卫星分子标记,以期为大菱鲆(Scophthalmus maximus)育种提供合适的抗鳗弧菌分子标记。实验鱼经鳗弧菌(Vibrio anguillarum)感染,分为非抗病组与抗病组。对两组鱼PCR扩增出的差异条带进行个体统计,再进行微卫星位点与抗鳗弧菌的相关性分析,并分析对比了两组鱼的遗传多样性。结果表明,微卫星位点Sma-USC108、Sma-USC141的等位基因片段分别在215bp和200bp与抗鳗弧菌性状的正相关性极显著,相关系数分别达到0.363和0.407(P0.01);微卫星位点FF0911、Sma-USC62、Sma-USC279的等位基因片段分别在189bp、163bp和236bp与抗鳗弧菌性状的负相关性极显著,相关系数分别达到–0.377、–0.364和–0.363(P0.01)。经过二次验证,最终确定Sma-USC141和FF0911两个微卫星位点可指导大菱鲆抗鳗弧菌的辅助育种。两组大菱鲆的群体遗传多样性分析对比表明:抗病群体与非抗病群体的遗传变异水平较低,两个群体的遗传多样性水平相当。  相似文献   

15.
Twenty-six half-sib groups(53 full-sib families) of turbot, Scophthalmus maximus Linnaeus, were obtained by artificial insemination. We measured growth in the offspring(40–50 individuals/family) and subjected them to a thermal tolerance challenge over a period of 34 d. There was no significant difference in daily mortality(range: 0.580%–1.391%) between Days 1–13 during the thermal tolerance challenge. However, daily cumulative mortality increased rapidly between Days 14 and 29, especially on Days 15 and 16(20.232% and 34.377%, respectively). Mortality was highest on Day 16(14.145%). We estimated the genetic parameters using the average information restricted maximum likelihood method. We used a likelihood ratio test to evaluate the significance of effects in models with and without identity as an effect, and compared the final log-likelihoods(maximum log L). Lastly, we estimated phenotypic and genetic correlation between the upper thermal tolerance limit(UTT) and body weight(BW). In this study, the positive phenotypic correlation was low between UTT and BW(0.093±0.029). The genetic correlation between UTT and BW was negative(-0.044±0.239). The heritability for upper thermal tolerance was low(0.087±0.032), which is of approximately moderate heritability. The heritability for body weight was high(0.303±0.074). Our results suggest there is significant potential for improvement in the culture of turbot by selective breeding.  相似文献   

16.
A juvenile (26 mm) specimen of the New Zealand turbot Colistium nudipinnis (Waite) is figured and described. Differences between the juvenile and adult forms, and characters distinguishing juvenile C. nudipinnis from the young of other New Zealand species of flatfish, are noted.  相似文献   

17.
Studies were conducted to investigate the non-specific immune responses and disease-resistance of juvenile turbot Scophthalmus maximus,cultured at four different salinities(8,20,32 and 40) . Three concentrations(3.75 × 10 7,3.75 × 10 8 and 3.75 × 10 9 CFU/ml) of Vibrio anguillarum suspension were employed at each salinity to determine the 4-day LD 50 . The serum lysozyme activity,the alternative complement pathway activity(ACH50) and the phagocytosis percentage of head kidney in turbot were tested at 24,48 and 72 h post-challenge of V. anguillarum(1.1 × 10 8 CFU/ml,0.1 ml) ,respectively,to evaluate the non-specific immune responses at the selected rearing salinities. Fish reared at salinity 20 had the lowest mortality,namely,the highest 4-day LD 50 value(8.88 ± 0.17) . Besides,the lysozyme activity,ACH50 and the phagocytosis of turbot were the highest at the salinity 20,but with the lowest at the salinity 40 treatment regardless of sampling time. In addition,the non-specific immune activities kept increasing within 72 h post-challenge of V. anguillarum,except that the lysozyme activity increased from 24 to 48 h,and then decreased from 48 to 72 h at 40 significantly. These results together indicate that rearing in intermediate salinity(20) was able to enhance the immunity and disease-resistance of turbot.  相似文献   

18.
本研究估计了大菱鲆收获体重性状的遗传参数和选育遗传进展。数据共包括3个世代（G0，G1，G2）的508个全同胞家系10952尾个体。G0，G1，G2的体重估计遗传力分别为0.11±0.08，0.18±0.09，0.17±0.07；世代间估计遗传力为0.19±0.04。每一世代母本和共同环境效应分别为0.10±0.04，0.14±0.04，0.13±0.03；世代间为0.12±0.01。G0和G1世代选择差分别为,18.24g和21.19g。对应的G1和G2世代的遗传进展为22.06g，11.93g；百分比表示分别为6.36%，3.52%。连续两代选择之后总遗传进展为10.10%。以上结果说明针对大菱鲆体重性状的选育项目是成功的。  相似文献   

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