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1.
《海洋与湖沼》2012,43(4)
通过nlsrDNA（nuclearlarge．subunitribosomalDNA）及nssrDNAfnuclearsmall．subunitri．bosomalDNA）的PCR—RFLP研究广东徐闻地区8科15属25种62个造礁石珊瑚样本的共生藻。结果表明,共生藻nlsrDNA的RsaI酶切基因型只存在一种,属于C系群共生藻;而nssrDNA的MobI和TaqI两种酶切都存在两种基因型。实验进一步通过PCR直接测序法得到62个造礁石珊瑚样品的共生藻ITS序列,与GenBank上的4种虫黄藻ITS序列构建Neighbor．Joining系统发育树,结果表明该区的造礁石珊瑚共生两种不同种类（亚系群）的共生藻,分别为c1亚系群与C15亚系群共生藻,两个亚系群间的遗传距离为0．019。广东徐闻地区造礁石珊瑚共生藻多样性偏低,暗示该地区珊瑚礁生态系统应对环境变化的能力可能较弱。 相似文献
2.
通过核糖体ITS(Internal Transcribed Spacer)的核苷酸序列研究了深圳杨梅坑海域20种47个造礁石珊瑚样本的共生藻。通过ITS序列分析,与GenBank上的4种不同的共生藻构建Neighbor-Joining聚类树,进行石珊瑚共生藻分类和遗传多样性分析。结果表明,该海域的造礁石珊瑚共生藻属于2种不同的种类(亚系群),19个样品属于C1亚系群共生藻,1个样品属于C15亚系群共生藻,C1和C15两个亚系群共生藻之间的遗传距离为0. 01。将深圳杨梅坑海域得到的ITS序列与NCBI数据库上的福建东山海域、广东徐闻地区的C1系共生藻进行比对,只有深圳杨梅坑海域藻类样本平均(A+T)碱基含量为49. 4%,(A+T)含量小于(G+C)含量。构建Neighbor-Joining聚类树表明,深圳杨梅坑海域石珊瑚共生藻与福建东山海域的亲缘关系较近,而与广东徐闻地区的亲缘关系较远,地理隔离是主要的因素。 相似文献
3.
本研究利用核糖体大亚基5'端序列PCR-RFLP以及转录单元内间隔区(Internal TranlsclqIbed Sppacer,rrS)序列分析相结合的方法,首次对福建东山岛附近海域3种优势种类造礁石珊瑚共生藻进行了分子系统分类和遗传多样性研究.PCR-RFLP分析发现东山岛附近海域3种优势种类造礁石珊瑚共生藻都属于C系群共生藻,而ITS序列的序列分析结果表明东山岛附近海域3种优势种类造礁石珊瑚共生藻都属于C1亚系群.研究结果表明ITS序列进化速度快,适合于造礁石珊瑚共生藻属亚系群水平的鉴定.而东山岛附近海域造礁石珊瑚共生藻的多样性低,暗示东山岛附近海域造礁石珊瑚共生藻共生系统面对外界环境压力的适应能力较低. 相似文献
4.
珊瑚白化是导致全球珊瑚礁生态系统衰退的最重要原因之一,野外观察结果表明不同种属的造礁石珊瑚对于海水温度升高的耐受性有所差异.选取多孔鹿角珊瑚(Acropora millepora)和丛生盔形珊瑚(Galaxea fascicularis)为研究对象,比较其共生藻在温度升高时的光生理差异.对多孔鹿角珊瑚和丛生盔形珊瑚共生藻的分子系统学研究结果表明:多孔鹿角珊瑚和丛生盔形珊瑚的共生藻属于不同系群,丛生盔形珊瑚共生藻属于D系群,而多孔鹿角珊瑚共生藻属于C1亚系群.当温度升高到30℃时并未对两种造礁石珊瑚共生藻光合系统Ⅱ造成损害,而当温度升高到34℃时两种造礁石珊瑚共生藻的Fv/Fm值急剧下降,其光合系统Ⅱ遭受损害.多孔鹿角珊瑚和丛生盔形珊瑚分别与不同系群的共生藻共生可能是导致其对海水温度升高耐受性不同的主要原因,与C1亚系群共生藻共生的多孔鹿角珊瑚对水温升高敏感,容易白化,而与D系群共生藻共生的丛生盔形珊瑚对水温升高的耐受性强,不易白化. 相似文献
5.
综述了虫黄藻的分类研究,其中与造礁石珊瑚共生的虫黄藻主要是共生藻属(Symbiodinium)的种类,重点概述了共生藻的分类和遗传多样性研究进展,特别综述了分子生物学技术在造礁石珊瑚共生藻的分类和遗传多样性方面的研究近况,并对未来共生藻的分类和遗传多样性研究作了展望.目前多采用分子生物学手段进行共生藻的分类和遗传多样性研究,PCR-RFLP是解决共生藻系群水平分类的有效分子标记,而DNA序列分析是目前进行共生藻分子进化和系统发育研究最有效的方法.目前应用于共生藻分子系统发生研究的DNA信息主要为核糖体RNA.对共生藻进行分类和遗传多样性研究,将有助于理解造礁石珊瑚共生藻共生系统对外界环境变化的生态响应机制. 相似文献
6.
造礁石珊瑚与共生藻 Symbiodinium spp.的互利共生对维护多样性极为丰富的珊瑚礁生态系统至关重要.在受到诸如水温异常等环境胁迫时,宿主珊瑚会排出体内共生藻而导致珊瑚白化直至死亡.造礁石珊瑚群体丰富的颜色对于珊瑚适应环境有着重要的作用,即使是同种造礁石珊瑚的不同群体,它们在颜色上也会有差异.丛生盔形珊瑚 Galaxea.fascicularis 作为印度-太平洋区系常见种广泛分布于海南三亚珊瑚礁海域,不同群体的颜色相异.对绿色和褐色2种颜色的丛生盔形珊瑚群体共生藻的28S rDNA进行限制性片段长度多态性(polymerase chainreaction-restrictionfragmentlength polymorphism,PCR-RFLP)分析,结果显示,该珊瑚可以与C和D系群共生藻分别或同时共生.此外,丛生盔形珊瑚2种颜色群体的共生藻组成并无显著差异,表明珊瑚群体的颜色差异与共生藻的组成并无直接联系.影响珊瑚表型颜色的因素复杂,包括珊瑚的绿色荧光蛋白(green fluorescent protein,GFP)、珊瑚和共生藻的各种色素等,具体机理需要进一步研究. 相似文献
7.
分别研究了徐闻3种滨珊瑚的ITS1和ITS2基因的碱基组成和G+C含量,并和已上传至Genbank上的其他9种滨珊瑚的ITS序列进行比较,研究了徐闻3种滨珊瑚的系统发生关系.序列分析结果显示,3种滨珊瑚的ITS1的长度为205 bp～209 bp,G+C含量为37.6％～45.5％,ITS2的长度为192 bp～226 bp,G+C含量为45.1％～50.7％,利用MEGA4.1软件计算滨珊瑚属基于ITS1和ITS2基因的平均遗传距离分别为0.097和0.200.基于ITS1和ITS2的NJ系统进化树都显示出,灰黑滨珊瑚位于进化树的基部,是原始的类群,普格滨珊瑚是进化类群,澄黄滨珊瑚是过渡类群. 相似文献
8.
造礁石珊瑚的分子系统学研究进展 总被引：1，自引：0，他引：1
综述了造礁石珊瑚系统发生关系和分类的研究现状,重点概述了造礁石珊瑚的分类和遗传多样性在分子生物学领域的研究进展。目前采用的进行造礁石珊瑚分类和遗传多样性研究的分子生物学方法,主要弥补了造礁石珊瑚在传统形态分类学上无法准确界定的缺点,其中核糖体RNA和线粒体DNA序列分析是目前对造礁石珊瑚分子进化和系统发育研究最有效的方法。最后,对未来造礁石珊瑚的分类和遗传多样性研究做了展望,对珊瑚礁框架生物造礁石珊瑚进行分类和遗传多样性的研究,将有助于为珊瑚礁生态系统的保护和恢复提供理论基础。 相似文献
9.
造礁石珊瑚是珊瑚礁生态系统的框架生物,它们既能够通过共生藻的光合作用进行自养,也能够通过触手捕获和黏液吸附等方式进行异养。通过研究造礁石珊瑚光合自养以及异养营养的机理和过程,系统分析了光照、温度、营养盐、潮汐、水流、CO2质量浓度以及食物的可获得性等因素对造礁石珊瑚光合自养和异养营养产生的影响,并讨论了珊瑚的这2种营养方式对环境变化的适应性。在环境适宜的条件下,光合自养是健康造礁石珊瑚的主要营养方式;当珊瑚自养营养的供给受到限制时,异养营养能够在一定程度上弥补其营养缺失,甚至可能成为珊瑚的主要营养方式。造礁石珊瑚的2种营养方式能够对不同环境因素的变化做出不同响应,并通过两者之间的互补以适应环境变化。今后研究的重点应放在归纳各类因素对造礁石珊瑚2种营养方式的影响;深入研究造礁石珊瑚异养营养方式的规律与环境适应性;厘清造礁石珊瑚光合自养与异养营养之间的关系和协调模式。 相似文献
10.
利用PCR技术对澄黄滨珊瑚的2种分子标记（线粒体细胞色素氧化酶亚基1基因COI和核糖体RNA内转录间隔区基因ITS）进行测序,探讨COI序列和ITS序列在澄黄滨珊瑚（Porites lutea）群体研究中的适用性,并从中选出最适合研究澄黄滨珊瑚群体遗传多样性的分子标记．结果显示COI序列变异位点少,成对序列差异在群体内、群体间都很小,不适于澄黄滨珊瑚的群体研究;而ITS区序列个体内成对的序列差异仅为0．35％,可以作为研究澄黄滨珊瑚群体遗传多样性的分子标记;通过对ITS1、ITS2、5．8SrRNA、ITS1＋ITS2及ITS区序列的比较,认为ITS1＋ITS2序列是最适合研究澄黄滨珊瑚群体遗传多样性的分子标记．本研究为以后研究我国沿岸造礁石珊瑚澄黄滨珊瑚的群体遗传结构提供方法依据,从而为保护管理扣恢复受损珊瑚礁生态系统提供遗传学数据支持． 相似文献
11.
Lack of association between color morphs of the Jellyfish Cassiopea andromeda and zooxanthella clade
Kathrin P. Lampert Patrick Bürger Sebastian Striewski Ralph Tollrian 《Marine Ecology》2012,33(3):364-369
Understanding the ecology and evolution of the cnidarian-algal symbiosis is of major scientific interest as it is sensitive to temperature and strong light and may therefore be susceptible to climate change. The stability of this mutualism is often mediated by host color pigments that influence photosynthetic activity in symbiotic dinoflagellates either by providing the photosystem with irradiance of suitable wavelength or by protecting it from much too much and potentially damaging light. Like scleractinian corals, the upside-down jellyfish, Cassiopea andromeda, relies heavily on the nutrients provided by its symbionts of the dinoflagellate genus Symbiodinium. It occurs in several conspicuously different color morphs and is found in habitats with high levels of irradiation. We tested whether the color morphs of Cassiopea were correlated with the Symbiodinium distribution in the host and whether host color was associated with different clades of Symbiodinium. We found that the presence of color pigment did not correlate with the distribution of Symbiodinium in the host. Symbiodinium was found in both the colored tentacles of the jellyfish and the colorless feeding tentacles. At least six different color morphs co-occurred in the very shallow waters of the Red Sea, but they all hosted a single Symbiodinium clade (clade A1). Therefore, no correlation of host color morph and Symbiodinium clade could be found. Photoaccumulative or photoprotective functions of host pigments, as proposed for some scleractinian corals, thus seem unlikely in the colored tentacles (vesicles) of the upside-down jellyfish Cassiopea andromeda. 相似文献
12.
Pollution, turbidity and coral bleaching history, as well as coral diversity, vary along the Tanzanian coastline. Prior to this study, it was not known whether exposure to such environmental variation might have influenced the diversity and distribution of Symbiodinium along this coastline. Such information can provide insight into whether Tanzanian reef-building corals develop adaptation to current trends of climate change. Here, 10 reef-building coral samples were collected from different reefs along the Tanzanian coast with different micro-environments and bleaching histories. The ITS-2 region of ribosomal DNA was employed in the characterisation of Symbiodinium harboured by reef-building corals. DGGE fingerprints and DNA sequences showed that most coral species host a single Symbiodinium type, which is maintained throughout the coast regardless of local environmental differences. We present polymorphic symbioses in Acropora spp., Millepora sp. and Galaxea fascicularis in mainly turbid and warm environments as a sign of adaptation to harsh conditions. However, such adaptation may not provide marked resistance to bleaching because Acropora is a bleaching-susceptible genus. 相似文献
13.
Analysis of symbiotic Symbiodinium in scleractinian corals off Northwestern Kish Island,Persian Gulf 
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下载免费PDF全文 Amirhossein Gheitanchi Mashini Mona Fard Yazdani Pargol Ghavam Mostafavi Mohammad Hassan Shahhosseiny 《Marine Ecology》2017,38(2)
The genus Symbiodinium plays an essential role in the resistance and survival of reef‐building corals during temperature anomalies. Coral colonies inhabiting the Persian Gulf (PG) experience extended periods of different stresses. Kish Island is located in the harsh environment of the Northern PG with previously reported bleaching episodes. Samples of six coral species from Northwestern Kish Island were analysed by internal transcribed spacer 2 of ribosomal DNA to identify in hospite Symbiodinium populations. The results showed that lineage D of Symbiodinium was the most prevalent clade among different coral colonies, while clade C was only detected in symbiosis with a single coral species. However, the detected Symbiodinium subclades belonged to two host generalists. The predominance of the stress tolerant Symbiodinium trenchii and subclade C3 could suggest an acclimatization strategy to cope with the hostile environment of the PG. 相似文献
14.
Reef-building corals harbor symbiotic dinoflagellates, Symbiodinium spp., which are currently divided into several clades. The responses of corals associated with different Symbiodinium clades to thermal stress are not well understood, especially at a gene expression level. Juveniles of the coral Acropora tenuis inoculated with different algal types (clade A or D) were exposed to thermal stress and the expression levels of four putative stress-responsive genes, including genes coding green and red fluorescent proteins, an oxidative stress-responsive protein, and an ascorbic acid transporter, were analyzed by quantitative real-time PCR. The expression levels of the four genes decreased at high temperatures if juveniles were associated with clade A symbionts but increased if the symbionts were in clade D. The intensity of green fluorescence increased with temperature in clade D symbionts harboring juveniles, but not in juveniles associated with clade A symbionts. The present results suggest that genotypes of endosymbiotic algae affect the thermal stress responses of the coral juveniles. 相似文献
15.
There is currently much debate about the ecological advantages for reef corals of hosting multiple types of the symbiotic dinoflagellate Symbiodinium. Amongst these is their apparent capacity to tolerate higher than normal water temperatures. There is strong photokinetic evidence that the trait of heat‐tolerance in plants is accompanied by energetic tradeoffs but little such evidence yet exists for corals. We use rapid light curves (RLCs) to investigate the photokinetic basis for thermo‐tolerance in the reef coral Acropora millepora with symbionts of contrasting thermal tolerance for which there are measured differences in energetics. Our results show that under non‐stressful temperatures, corals with heat‐tolerant type D Symbiodinium had a 41% lower maximum relative electron transport rate (rETRmax) and lower light absorption efficiency (α) due to lower cell Chl a content compared with corals with heat‐sensitive type C2 symbionts. Our results provide support for a photokinetic link between heat tolerance and deficits in holobiont (coral + symbiont) growth, lipid stores and reproduction. Reduced electron transport rate and light absorption capacity may be genotype‐specific attributes that enable clade D symbionts and their cnidarian hosts to cope with temperature stress but they inherently influence the photosynthetic function of the symbionts and thus have negative downstream effects on the coral. 相似文献
16.
Decadal changes in common reef coral populations and their associations with algal symbionts (Symbiodinium spp.) 下载免费PDF全文
下载免费PDF全文 Decadal populations changes in four coral taxa and their patterns of association with algal symbionts (Symbiodinium spp. – 10 years of sampling) were examined on Kenyan back reefs over a period of climatic disturbances (1991?2009). Some of the better surviving taxa, Pavona and Pocillopora, were associated with variable temperature regimes and >50% of sampled colonies in these taxa had some of the more thermally tolerant Symbiodinium in clade D. In contrast, only around 35% of Acropora and no branching forms of Porites contained detectable levels of clade D, and both taxa experienced high levels of thermally‐induced mortality and poor recovery. Overall, however the relationship between Symbiodinium clade and population‐level success of coral hosts was not strong, and differential success inside and outside fisheries closures suggests that other factors, such as predation on corals, were also influential. Consequently, while Symbiodinium in clade D may contribute to the success of coral hosts across thermal disturbances, multiple ecological factors and additional biological traits also influence their long‐term survival. 相似文献
17.
基于2018年12月在亚龙湾沿岸进行的13个站位的珊瑚礁调查,本文分析了该区域造礁石珊瑚的多样性、分布、覆盖率、死亡率和补充量。结果表明,亚龙湾西岸8个站位共发现造礁石珊瑚12科27属55种和11个未定种,其中蜂巢珊瑚科的种类最多,包括9属25种,其次为鹿角珊瑚科,包括3属17种。亚龙湾西岸各站位造礁石珊瑚种类数为12—33种,平均27种;覆盖率为2.8%—22.9%,平均12.9%;以丛生盔形珊瑚(Galaxea fascicularis)、同双星珊瑚(Diploastrea heliopora)和澄黄滨珊瑚(Poriteslutea)等团块状珊瑚为主要优势种;种类多样性和空间分布异质性都较高。与2010—2011年相比,亚龙湾西岸造礁石珊瑚平均覆盖率显著下降,优势种也有较大的变化,表明该海域的珊瑚礁已大幅衰退,这可能与偏高的悬浮物含量和沉积速率有关。不过,亚龙湾西岸造礁石珊瑚的补充量为1.6ind./m2,与周边海区相比,有相对较高的自然恢复潜力。 相似文献
18.
Spatial variation in the photophysiology of symbiotic dinoflagellates (zooxanthellae) of the scleractinian coral Pocillopora damicornis was examined along an environmental gradient in the Whitsunday Islands (Great Barrier Reef) at two depths (3 m and 6 m). Chlorophyll a fluorescence of photosystem II (PSII) and PAR-absorptivity measurements were conducted using an Imaging-PAM (pulse-amplitude-modulation) fluorometer. Most photophysiological parameters correlated with changes in environmental conditions quantified by differences in water quality along the gradient. For example, maximum quantum yield (Fv/Fm) increased and PAR-absorptivity decreased as water quality improved along the gradient from nearshore reefs (low irradiance, elevated nutrients and sediments) to outer islands (high irradiance, low nutrients and sediments). For apparent photosynthetic rate (PSmax) and minimum saturating irradiance (Ek), the direction of change differed depending on sampling depth, suggesting that different mechanisms of photo-acclimatisation operated between shallow and deep corals. Deep corals conformed to typical patterns of light/shade acclimatisation whereas shallow corals exhibited reduced PSmax and Ek with improving water quality coinciding with greater heat dissipation (NPQ241). Furthermore, deep corals on nearshore reefs exhibited elevated Q241 in comparison to outer islands possibly due to effects of sedimentation and/or pollutants rather than irradiance. These results highlight the importance of mesoscale sampling to obtain useful estimates of the variability of photophysiological parameters, particularly if such measures are to be used as bioindicators of the condition of coral reefs. 相似文献
19.
Symbiodinium (internal transcribed spacer 2) diversity in the coral host Agaricia lamarcki (Cnidaria: Scleractinia) between shallow and mesophotic reefs in the Northern Caribbean (20–70 m) 下载免费PDF全文
下载免费PDF全文 Matthew Q. Lucas Michael Stat Matthew C. Smith Ernesto Weil Nikolaos V. Schizas 《Marine Ecology》2016,37(5):1079-1087
This study investigated differences in Symbiodinium diversity in the scleractinian coral species Agaricia lamarcki between shallow (20–25 m) and mesophotic (50–70 m) depths in the Northern Caribbean. Corals were sampled in each of four shallow sites (20–25 m; n = 18) and three mesophotic sites (50–70 m; n = 18) from Mona Island (Puerto Rico) and the US Virgin Islands during a mesophotic exploratory cruise and from the La Parguera shelf edge, off Southwestern Puerto Rico. Symbiodinium diversity was assessed using internal transcribed spacer 2 sequences clustered into operational taxonomic units (OTUs). Clustering resulted in eight clade C OTUs and one clade D OTU. Of these, there were three common Symbiodinium OTUs consisting of C3 and D1a.N14 in shallow reefs and C11.N4 in mesophotic reefs. Statistical tests (permutational multivariate analysis of variance and analysis of similarity) showed significant differences between clade C Symbiodinium OTUs in A. lamarcki colonies located at shallow and mesophotic depths, indicating symbiont zonation. Symbiodinium diversity in A. lamarcki from the Northern Caribbean is comparable to previous reports in the Southern Caribbean for this species. This is the first report of the thermal tolerant species Symbiodinium trenchii (D1a) in A. lamarcki. 相似文献