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Seven bacterial clones with alginate-utilizing activity were isolated from rotten kelp. By activity test, the Vibrio sp.QD-5 with the potential alginate-degrading capability was chosen to carry out the draft genome sequencing, and the result showed that the Vibrio sp. QD-5 containing an alginate lyase gene cluster. One of these genes, aly-IV,was cloned and characterized for the first time. After overexpression, Aly-IV, with a molecular mass of about62 kDa and a theoretical isoelectric point(pI) of 5.12, was purified to a specific activity of 1 256.78 U/mg and showed highest activity at 35°C in the Tris-HCl buffer at pH of 8.9. Moreover, the enzyme activity was enhanced by the metal ions of Na~+, K~+ and Mg~(2+) under certain concentration. Aly-IV degraded favorably polyG blocks in an endo-type, yielding monomer and dimer as the main products. Due to its high substrate specificity, Aly-IV could be used as a potential tool for production of polyG oligosaccharides with low degree of polymerization(DP) and for determining the fine structure of alginate. 相似文献
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从大型褐藻藻体分离获得一株具有高效降解琼胶和褐藻胶能力的革兰氏阴性菌菌株ST-6。16S rDNA序列分析结果表明,该菌株与海绵假单胞菌的相似度达到99%,NJ法构建系统进化树也与海绵假单胞菌归为一类,鉴定为海绵假单胞菌Pseudomonas pachastrellae ST-6。在2216E培养基、30℃培养条件下,海绵假单胞菌ST-6的生长曲线表明,接种10~48 h为菌株的指数生长期,48~72 h为生长稳定期。产酶结果表明,菌株ST-6在指数生长期时菌液的胞外琼胶酶相对酶活力较高,在接种48 h时,菌液的琼胶酶相对酶活力最高为249.15 U/m L。此外,发现菌株ST-6的琼胶酶和褐藻胶酶的分泌类型分别为非诱导型和诱导型。采用单因素分析法对其生长和产酶条件进行分析,结果表明,海绵假单胞菌ST-6最适生长条件为:温度25~35℃,33值5~9;最适产琼胶酶条件为:温度30℃,33值为7,琼胶浓度0.3%。最适产褐藻胶酶条件为:温度35℃,33值为9。在温度30℃、339和褐藻酸钠浓度0.15%的培养条件下,海绵假单胞菌ST-6获得最高胞外褐藻胶酶相对酶活力为135.54 U/m L。 相似文献
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海藻胶低聚寡糖的酶法制备纯化技术及保水理化性质分析 总被引：1，自引：0，他引：1
海藻胶低聚寡糖是从马尾藻等藻类中提取出来的一种多糖类物质,具有良好的保水功能。本文采用酶解技术对海藻胶低聚寡糖的制备纯化工艺进行研究,通过对酶解过程中反应温度、酶解时间、加酶量、底物浓度和pH等进行研究,结果表明:酶解温度50°C、时间4h、加酶量45%、底物浓度0.4%、pH 6.0时,海藻胶降解成低聚寡糖的产率最高,达到75%左右。进一步对海藻胶低聚寡糖进行纯化,结果表明当温度控制在27°C,时间在2h时,分子量为6000—8000Da海藻胶低聚寡糖分离效率最高,达到70%以上,并对6000—8000Da海藻胶低聚糖的保水理化性能进行分析,结果表明6000—8000Da海藻胶低聚寡糖具有良好的保水性能。本研究可为开发一种安全、高效、节能、环保,适用于冷冻鱿鱼和虾仁等的生物保水剂提供理论基础。 相似文献
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Vibrio sp.510产褐藻胶裂合酶的底物专一性分析 总被引：4，自引：0，他引：4
Vibrio sp.51 0具有很强的产生褐藻胶裂合酶的能力。本实验对该菌发酵产生的褐藻胶裂合酶经疏水色谱除去杂蛋白 ,再经灌注色谱分离得到 3个酶组分峰。经底物专一性检测 ,峰 1和峰 3对聚甘露糖醛酸和聚古罗糖醛酸均具降解作用 ,峰 2只对聚甘露糖醛酸有降解作用。园二色谱测定酶的二级结构 :峰 1结构最为复杂 ,以β-转角为最高 ,占 31 .5% ,无规线团占 2 7% ,α-螺旋占 2 5.8% ;峰2为β-折叠 ,占 95.5% ;峰 3以 60 %的α-螺旋和 40 %的无规线团形式存在。 3个分离峰的底物专一性和二级结构的差异证明了褐藻胶裂合酶蛋白的结构与功能之间的相关性。 相似文献
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褐球固氮菌(Azotobacter chroococcum)是一种海藻酸降解菌.本实验采用PCR的方法,以褐球固氮菌基因组DNA为模板,克隆出约1.05 kb的海藻酸裂解酶基因algL的成熟蛋白编码序列,并将其插入巴斯德毕赤酵母(Pichia pastoris)表达载体pPIC9K中,获得重组质粒pPIC9K-algL.重组质粒线性化后用聚乙二醇(PEG)法导入毕赤酵母菌株GS115中,获得高效分泌表达海藻酸裂解酶的毕赤酵母工程菌株.用甲醇诱导培养基进行摇瓶发酵,表达得到43 kDa的目的蛋白,酶活力可达1 400 U/cm3左右.经测定,该重组酶的最适反应pH为8.5,最适反应温度为40℃,并且在20~55℃,pH2.0~11.0具有较好的稳定性.另外,10 mmol/cm3的Cu2+,Fe2+,Co2+,Mn2+和Ca2+对酶有不同程度的抑制作用. 相似文献
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对海洋来源的Vibro sp．QY102的产褐藻胶裂解酶的发酵条件进行研究。结果表明，该菌株最适液体培养基成分为（w／v）：0．5％褐藻酸钠；0．4％蛋白胨；0．3％KH2PO4；0．7％K2HPO4·3H2O；2％NaCl；0．01％MgSO4·7H2O，pH=6．0。按3％的接种量接入培养基，30℃150r／min振荡培养120h，产酶达到10．2u／mL，为优化前的4．5倍。Mg^2＋是该菌株产酶所必需的，这在其他褐藻胶裂解酶生产菌株中未见报道。该菌株产酶发酵条件的研究，为褐藻胶裂解酶的大规模制备及应用奠定了基础。 相似文献
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CO2 fixation pathway of Caminibacter profundus, a chemolithoautotrophic -Proteobacteria from deep-sea hydrothermal vent, was determined and characterized by genetic and enzymatic analyses. Gene expression of key enzymes for CO2 fixation in response to salinity, pH and O2 in Medium 829 were also investigated. The results demonstrate that C. profundus contained aclB, porA and oorA, the genes encoding key enzymes of reductive tricarboxylic acid (rTCA) cycle. However, genes fragments of cbbL and cbbM encoding key enzyme of Calvin cycle were not recovered. Key enzymatic activities of ATP citrate lyase (ACL), pyruvate: ferredoxin oxidoreductase (POR) and 2-oxoglutarate: ferredoxin oxidoreductase (OOR) were also present in C. profundus. The combination of genetic and enzymatic analyses confirm that C. profundus adopted rTCA cycle for carbon assimilation. The results of aclB and oorA relative expressions of C. profundus demonstrate that the ranges of environmental factors for high genes expression were sea salt 3.0%-5.0% (optimum 3.0%), pH 5.0-6.5(optimum pH 6.5), anaerobic to microaerobic conditions (optimum 1.0% O2 ). Gene expression patterns under different conditions show similar patterns with bacterial growth, revealing that key rTCA cycle genes provided molecular basis for bacterial growth and propagation. Our results suggest that C. profundus could regulate key genes of rTCA cycle for carbon assimilation and energy metabolism in response to environmental fluctuations in hydrothermal vent. 相似文献
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根据已发表c DNA序列设计引物扩增了2龄皱纹盘鲍(Haliotis discus hannai Ino)的褐藻酸酶、海带淀粉酶、α-淀粉酶和纤维素酶基因片段并测定其序列,同时用半定量反转录PCR和实时荧光定量PCR技术分析了它们在不同组织中的表达。结果表明:以cDNA为模板的PCR产物序列与已发表的相应基因序列一致;以DNA为模板扩增的a-淀粉酶和纤维素酶基因片段分别含438 bp和667 bp的内含子;在纤维素酶基因片段的外显子和内含子区各检测到2个SNP;4种多糖裂解酶基因均主要在消化腺中表达,褐藻酸酶基因的表达最强,其次为纤维素酶,表明在摄食海带的条件下,褐藻酸是成体皱纹盘鲍可利用的最重要多糖类物质之一。本文的结果为进一步开展皱纹盘鲍"97"选育群体在不同发育期、摄食不同藻类及不同培育环境下的多糖水解酶基因表达研究奠定了基础。 相似文献
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The osmolyte dimethylsulphoniopropionate (DMSP) can be enzymatically cleaved to dimethylsulphide (DMS), acrylate and a proton. The enzyme involved in this reaction is dimethylpropiothetin dethiomethylase (DMSP lyase; enzyme classification number 4.4.1.3.). Although the importance of this reaction for the global sulphur cycle, the influence of DMS on atmospheric acidity and the possible effect on climate regulation have been widely recognised, our knowledge of DMSP lyases is limited to just a few studies. Activity measurements of DMSP lyases offer an important step towards a better understanding of the conditions under which DMS is produced. In the available published data somewhat similar methods have been used before, but a critical examination of the method limitations has not been reported. To encourage further research on this enzyme, we suggest and detail two protocols for measurements of DMSP lyase activity: An in vitro assay for crude cell extracts or purified enzyme and an in vivo method for whole cells, which we recently started to use. After addition of DMSP, samples incubated in a gas tight vial may produce DMS from enzymatic cleavage under suitable conditions, and a DMS production rate can be estimated from time-series measurements of DMS in the headspace of the vial. Headspace analysis of DMS is a useful and rapid technique to estimate and compare DMSP lyase activities from different sources. The relative rates of DMS production in the liquid and of the gas transfer between liquid and headspace, determine the rate of DMS production measured via headspace analysis. If DMS production in the liquid is higher than the rate of transfer, headspace measurements will not reflect the actual amount of DMS produced in the liquid. In this case, extracts have to be diluted to a level that ensures linearity between dilution factor and reduction of enzyme activity. Additionally, incubation volumes and vials should be selected to provide a high surface-to-volume ratio to ensure maximum flux of DMS from the aqueous phase into the headspace. The methods can be adapted to further investigate species- and strain-specific activities, biogeographical distribution, cellular location and biochemical properties of various DMSP lyases. 相似文献