牙鲆GHR基因Promoter区微卫星序列多态性与生长性状关系的初步研究   总被引：2，自引：0，他引：2  

倪静  尤锋  于深辉  张培军  徐冬冬  吴志昊  文爱韵  徐永立 《中国海洋大学学报(自然科学版)》2008,38(5)

采用牙鲆GHR基因5'端Promoter区的1个微卫星标记,对胶南和日照2个牙鲆养殖群体进行了群体遗传多样性的研究,并探索该基因多态性位点与牙鲆生长性状之间的相关性.结果表明,2个群体在该座位的等位基因数为12和9个,有效等位基因数为6.26和5.04个,多态信息含量为0.84和0.80.2个群体该座位的Hardy-Weinberg遗传偏离指数均为正值,并没有显示出杂合子缺失,但各基因型分布频率都在一定程度上偏离Hardy-Weinberg平衡(P<0.01).连锁分析中发现,在胶南群体中,IM基因型对应的个体在全重、全长、体长、头长、体高和眼径形态学数据中均是最大的;在日照群体中,BC基因型对应的个体在全重、全长、体高、尾柄高、尾柄长和眼径数据中均是最大的;而CJ基因型对应的个体在体长和头长这两组数据中是最大的.该结果为研究GHR基因的变异对鱼类生长发育的影响及探索将该基因作为生长遗传标记的可行性奠定了实验基础.  相似文献   

Analysis on promoter elements of cpc operon from Arthrospira platensis     

LU Yongzhong  ZHANG Xuecheng 《海洋学报(英文版)》2008,27(1):85-91

  相似文献   

溶藻弧菌asp基因在大肠杆菌中表达活性研究及条件优化   总被引：1，自引：0，他引：1  

蔡双虎  鲁义善  吴灶和  简纪常  汤菊芬  黄郁葱 《广东海洋大学学报》2008,28(3)

为进一步研究溶藻弧菌碱性丝氨酸蛋白酶(ASP)蛋白生物学活性和功能,将构建的pET23d-asp在大肠杆菌BL21(DE3)中表达,对表达产物进行纯化分析,并优化表达条件。结果表明:在咪唑洗脱缓冲液浓度为100 mmol/L时,表达的可溶性ASP被大量洗脱,纯化的ASP相对分子质量约为42 000,具有蛋白活性;在诱导温度28℃、异丙基-β-D硫代半乳糖苷(Isopropyl-β-D-thiogalactopyranoside,IPTG)浓度1 mmol/L及诱导时间16 h时,表达的活性ASP蛋白最多。  相似文献   

A unified C-band and Ku-band geophysical model function determined by neural network approach     

ZOU Juhong  LIN Mingsen  PAN Delu  CHEN Zhenghu  YANG Le 《海洋学报(英文版)》2008,27(6):33-39

The geophysical model function （GMF） describes the relationship between backscattering and sea surface wind, so that wind vec- tors can be retrieved from backscattering measurement. The GMF plays an important role in ocean wind vector retrievals, its performance will directly influence the accuracy of the retrieved wind vector. Neural network （NN） approach is used to develop a unified GMF for C-band and Ku-band （NN-GMF）. Empirical GMF CMOIM and QSCAT-1 are used to generate the simulated training data-set, and Gaussian noise at a signal noise ratio of 30 dB is added to the data-set to simulate the noise in the backscat- tering measurement. The NN-GMF employs radio frequency as an additional parameter, so it can be applied for both C-band and Ku-band. Analyses show that the %predicted by the NN-GMF is comparable with the σpredicted by CMOIM and QSCAT-1. Also the wind vectors retrieved from the NN-GMF and empirical GMF CMOIM and QSCAT-1 are comparable, indicating that the NN-GMF is as effective as the empirical GMF, and has the advantages of the universal form.  相似文献   

Molecular phylogeny of familiar flatfish species （Pleuronectidae） in the northwestern Pacific Ocean based on mitochondrial cytochrome oxidase Ⅰ gene     

ZHANG Yan XIAO Yongshuang Gao Tianxiang 《海洋学报(英文版)》2008,27(2)

  相似文献   

Cloning and phylogenetic analysis of a fatty acid elongase gene from Nannochloropsis oculata CS179     

Kehou Pan  Xiaolei Ma  Jianzhong Yu  Baohua Zhu  Guanpin Yang 《中国海洋大学学报(英文版)》2009,8(4):392-398

Nannochloropsis oculata CS179, a unicellular marine microalga, is rich in long-chain polyunsaturated fatty acids (LCPUFAs). Elongase and desaturase play a key role in the biosynthesis of PUFAs. A new elongase gene, which encodes 322 amino acids, was identified via RT-PCR and 5′ and 3′ RACE. The sequence of the elongase gene was blast-searched in the NCBI GenBank and showed a similarity to those of the cryptosporidium. But the NJ-tree revealed that the N. oculata CS179 elongase clustered with those of the microalgae Phaeodactylum tricornutum, Ostreococcus tauri and Thalassiosira pseudonana.  相似文献   

基于COI序列的翡翠股贻贝Perna viridis线粒体遗传特性分析及其近缘种间的系统关系探讨   总被引：1，自引：0，他引：1  

位正鹏  孔晓瑜  吴相云  喻子牛 《热带海洋学报》2009,28(6):72-78

应用通用引物 COIL 1490和 COIH 2198对翡翠股贻贝Perna viridis的性腺和体细胞线粒体DNA进行PCR扩增，获得661bp长度的COI基因片段，经过比对性腺与体细胞的COI片段，发现雄性性腺与体细胞COI基因均为一个单倍型，即体内只有一种线粒体DNA类型，没有发现双单性遗传现象，雌、雄性腺的COI基因片段变异率很低（0.31%）。应用PAUP构建了NJ树、MP树以及贝叶斯法构建了贝叶斯树，对股贻贝属3种间的系统关系进行了分析，结果表明，翡翠股贻贝P. viridis与P. canaliculus 和 P. perna 之间的分化与分歧年代的估算是相吻合的。  相似文献   

The Complete Sequence of Mitochondrial COⅡ Gene of Fenneropenaeus chinensis and Its Applicability as a Marker for Phylogenetic Analysis     

YU Shanshan KONG Xiaoyu LI Yulong XU Hui 《中国海洋大学学报(英文版)》2007,6(2):187-192

The complete mitochondrial cytochrome oxidase subunit Ⅱ （COⅡ） gene of Penaeinae shrimp Fenneropenaeus chinensis was cloned and sequenced. The gene is 688 bp in length and codes for 229 amino acids. It shows 83.2%, 87.0% and 83.8% sequence similarity to Marsupenaeus Japonicus, Penaeus monodon and Farfantepenaeus notialis, respectively. The A＋T content of the whole gene and that at the third position of codons are 64.7% and 78.2%, respectively. The phylogenetic relationship between F. chinensis and three other species representing genera Farfanatepenaeus, Marsupenaeus and Penaeus was analyzed. Results showed that the genetic distances among the four taxa ranged from 0.144 0 to 0.200 5, exceeding those estimated with COⅠ and partial 16S rRNA gene sequences among Marsupenaeus, Litopenaeus and Melicertus, and being therefore larger than the value among subgenera. It has been suggested that the COⅡ gene has a faster evolutionary rate than that of the COⅠ gene and partial 16S rRNA gene and could be used for phylogenetic analysis at genus or species level. The results of the present study indicated that Farfantepenaeus, Fenneropenaeus, Marsupenaeus and Penaeus are at a higher phylogenetic level than subgenus, which supports the opinion of the elevation of phylogenetic status of the four subgenera to genus level.  相似文献   

全球海洋微生物普查发现大量新基因     

《海洋世界》2007,(4):6-6

在一支美国科研小组的领导下,各国科学家利用2年的时间完成了至今最为彻底的海洋微生物普查,记录下了600多万种新蛋白质的基因编码,使全球基因数据库的总量增加了一倍。  相似文献   

一株H_5N_1亚型禽流感病毒株NA基因的克隆与序列分析     

陈绍红  刘艳芬  张静  刘铀 《广东海洋大学学报》2007,27(4):85-88

用RT-PCR方法从1个H5N1亚型禽流感病毒分离株A/Chicken/Guangdong/DH/1997扩增NA基因cDNA片段,将其克隆至pMD18-T载体,获得重组质粒pMD-NA,并对其核苷酸序列进行测定和分析。结果表明,该毒株的NA基因长度为1350bp,编码449个氨基酸,与其它H5N1亚型AIV分离株的核苷酸序列同源性为97.0%～99.4%,氨基酸序列同源性为97.7%～99.1%,提示禽流感病毒NA基因保守性较高。NA基因氨基酸序列的聚类分析表明该毒株与来自香港的A/Pheasant/HK/FY155/01和A/Ch/HK/FY150/01两个分离株处于同一进化枝,亲缘关系较近。  相似文献