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假单胞菌(Pseudomonas sp.cn 4902)甘露醇-1-磷酸脱氢酶基因克隆及表达 总被引：1，自引：1，他引：1
参照几种生物的甘露醇—1—磷酸脱氢酶基因(mtl D)的序列设计引物，以极端耐盐的假单胞菌(Pseudomonas sp．cn 4902)的总DNA为模板，采用PCR扩增、构建重组高效表达载体以及生物信息学研究等方法，进行基因克隆、表达及功能定性等研究。结果表明，克隆获得一长为1149bp的基因。经蛋白质保守区域研究，初步判别该基因为mtl D结构基因。将该基因与pBV220质粒构建成高效表达原核重组载体pBH。SDS—PAGE电泳表明，含pBH的转化子产生特异的、分子量约为41kD的蛋白带，表达量约占菌体可溶性蛋白6．7％。转化子的耐盐水平比对照提高了约1／5。在含0．9mol／L NaCl的液体培养基中，转化子培养24h后其生物量约是对照的10．2倍，甘露醇含量约是对照的4．1倍。可见，假单胞菌的甘露醇—1—磷酸脱氢酶基因是一个重要的耐盐相关基因，该基因已在GenBank登记，代号为AY112696。 相似文献
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核酮糖-1,5-二磷酸羧化酶/氧化酶(RubisCO)(EC4.1.139)是光合细菌通过卡尔文循环固定二氧化碳的关键酶。本文采用PCR方法,从沼泽红假单胞菌株No.9中克隆到RubisCO基因(cbbM)序列(该序列已提交GenBank,登录号:GU061327)。采用同源建模法,建立了该RubisCO蛋白的三维结构模型,预测其活性位点。将cbbM基因亚克隆到表达载体pTV118N上,构建表达质粒pTV-CBBM,转化大肠杆菌BL21(DE3),获得表达菌株BL21(DE3)/pTV-CBBM,该菌株经IPTG诱导表达后,进行SDS-PAGE检测。采用气相色谱法测定破菌上清中的RubisCO酶活。结果表明:①cbbM基因编码461个氨基酸,与沼泽红假单胞菌株DCP3和DH1的RubisCO蛋白序列相似性分别为98%和99%;②推测沼泽红假单胞菌No.9中RubisCO蛋白的活性中心由Asn112、Lys192、Asp194、Glu195、His288、Arg289、His322、Gly424、Ser369、Gly370和Gly394等氨基酸残基组成;③重组蛋白分子量约为50kDa左右,与预测相符;④破菌上清中的RubisCO酶比活高于原始菌株中的酶活,说明目的基因在大肠杆菌中得到了有效表达。 相似文献
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海洋聚磷菌中核苷二磷酸激酶基因的克隆及序列分析 总被引：1，自引：1，他引：0
以海洋聚磷菌Halomonas YSR-3的总DNA为模板，用PCR法扩增核苷二磷酸激酶基因，将扩增片段克隆到pGM．T载体，转化Escherichia coli TOP10菌株，经蓝白斑筛选、菌落PCR得到阳性克隆，测序后对序列进行Blast比对分析。得到的基因序列长度为420bp，翻译后的序列与Loktanella vestfoldensis SKA53，Jannaschia sp．CCS1，Roseobacter sp．CCS2的核苷二磷酸激酶蛋白序列相似性分别为89％，86％，85％。 相似文献
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产壳聚糖酶菌株选育及培养条件优化 总被引：6，自引：0，他引：6
以假单胞菌Y8．0为出发菌株,分别通过亚硝基胍(NTG),Co^60,UV(紫外)诱变,采用透明圈法筛选,获得了产壳聚糖酶较好的突变菌株假单胞菌Y8,其所产酶活力达到3．0U／mL,酶活力提高近6倍,并具有较好的遗传稳定性。3种诱变方法中,UV诱变效果最好。对假单胞菌Y8产壳聚糖酶培养条件进行研究,得到1个比较优化的培养条件为：pH值6．5,温度32℃,壳聚糖3g／L,酵母膏0．3％,培养时间3d。不同金属离子及不同诱导物对酶合成的影响表明：Fe^2 ,Mg^2 激活作用显著。而Zn^2 ,Mn^2 则具有一定的抑制作用,壳聚糖和氨基葡萄糖对壳聚糖酶的产生都有较好的诱导作用。 相似文献
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宁波沿海陆源排污口假单胞菌属(Pseudomonas)分布特点 总被引：2，自引：2，他引：0
采用高通量454焦磷酸测序方法对宁波沿海2个重点排污口、8个一般排污口的20个站位水样进行分析, 得到2011年3月、5月、8月、10月份各排污口假单胞菌属的分布情况。结果表明, 宁波沿海陆源排污口中存在较多的假单胞菌属。在检出的假单胞菌属中, 维罗纳假单胞菌(Pseudomonas veronii)和莓实假单胞菌(Pseudomonas fragi)的含量相对较多, 分别占56.72%、13.904%; 排污口中假单胞菌属的数量存在季节性差异, 3月份、5月份假单胞菌的数量相对较多, 8月份和10月份较少, 推测与季节性温度变化有关; 假单胞菌属的含量与排污口的主要污染物有关, 氨氮含量较高的排污口假单胞菌属的含量更高。 相似文献
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闽南—台湾浅滩滩上升流区拮抗菌的初步研究 总被引：1，自引：0，他引：1
研究了闽南－台湾浅滩上升流区海洋拮抗菌的生态分布、种类组成及其抗菌活性。结果表明：在该海区海水中拮抗菌占总异养菌数的１．２～９．４％，沉积物中则点４．３～１５．６％；拮抗菌的分布具有明显的季节变化，夏季拮抗菌的丰度大于其他季节，属的组成也较复杂多样。在所分离的拮抗菌中，有６株拮抗菌对多种试验菌株有不同程度的抑制能力，被鉴定为假单胞菌属、孤菌属、黄杆菌属和无色杆菌属。作者讨论了海洋拮抗菌的时空分布与 相似文献
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Derek V. Ellis 《Marine Georesources & Geotechnology》2001,19(1):51-63
This article reviews information recently available from existing marine and coastal mining for responses to environmental issues affecting marine mining at different depths. It is particularly but not exclusively concerned with those issues affecting seabed biodiversity impact and recovery. Much information has been gathered in the past 10 years from shallow mining operations for construction aggregate, diamonds, and gold, from coastal mines discharging tailings to shallow and deep water, and from experimental deep mining tests. The responses to issues identified are summarized in a series of eight tables intended to facilitate site-specific consideration. Since impacts can spread widely in the surface mixing layer SML, and can affect the biologically productive euphotic zone, the main issues considered arise from the depth of mining relative to the SML of the sea. Where mining is below the SML, the issue is whether it is environmentally better to bring the extraction products to the surface vessel for processing (and waste discharge), or to process the extraction products as much as possible on the seabed. Responses to the issues need to be sitespecific, and dependent on adequate preoperational environmental impact and recovery prediction. For deep tailings disposal from a surface vessel, there are four important environmental unknowns: (1) the possible growth of "marine snow" (bacterial flocs) utilizing the enormous quantities of fine tailings particles (hundreds or thousands of metric tons per day) as nuclei for growth, (2) the possibility that local keystone plankton and nekton species may migrate diurnally down to and beyond the depth of deep discharge and hence be subjected to tailings impact at depth, (3) the burrow-up capability of deep benthos and their ability to survive high rates of tailings deposition, and (4) the pattern and rate of dispersion of a tailings density current through the deep water column from discharge point to seabed. Actions to obtain relevant information in general and site-specifically are suggested. 相似文献
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G. Parthiban 《Marine Georesources & Geotechnology》2000,18(3):223-235
Particle fluxes were measured 7 m above the sea bottom during the predisturbance, disturbance, and postdisturbance periods by using time series sediment traps attached to seven deep-sea moorings deployed in the INDEX experiment site in the Central Indian Basin. The predisturbance particle fluxes varied between 22.3 to 55.1 mg m -2 day -1 . Increased and variable particle fluxes were recorded by the sediment traps during the disturbance period. The increase observed was 0.5 to 4 times more than the background predisturbance fluxes. The increases in particle fluxes (~4 times) recorded by the sediment trap located in the southwestern direction (DMS-1) were the greatest, which could be the result of preferential movement of resuspended particles generated during the deep-sea benthic disturbance along the general current direction prevailing in this area during the experimental period. Also, the traps located closer to the disturbance area recorded greater fluxes than did the traps far away, across the Deep Sea Sediment Resuspension System path. This variability in recorded particle fluxes by the traps around the disturbance area clearly indicates that physical characteristics such as grain size and density of the resuspended particles produced during the disturbance had an important effect on particle movement. The postdisturbance measurements during ~5 days showed a reduction in particle fluxes of ~50%, indicating rapid particle settlement. 相似文献
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Arne Schnack-Friedrichsen Angela M. Davis Jim D. Bennell Dei G. Huws 《Marine Georesources & Geotechnology》2001,19(4):221-243
The interdependence between the seismo-acoustic properties of a marine sediment and its geotechnical/physical parameters has been known for many years, and it has been postulated that this should allow the extraction of geotechnical information from seismic data. Though in the literature many correlations have been published for the surficial layer, there is a lack of information for greater sediment depths. In this article, a desktop study on a synthetic seafloor model illustrates how the application of published near-surface prediction equations to subsurface sediments (up to several tens of meters burial depth) can lead to spurious predictions. To test this further, acoustic and geotechnical properties were measured on a number of sediment core samples, some of which were subjected to loading in acoustically-equipped consolidation cells (oedometers) to simulate greater burial depth conditions. For low effective pressures (representing small burial depths extending to around 10 meters subsurface), the general applicability of established relationships was confirmed: the prediction of porosity, bulk density, and mean grain size from acoustic velocity and impedance appears generally possible for the investigated sedimentary environments. As effective pressure increases through, the observed relationships deviate more and more from the established ones for the near-surface area. For the samples tested in this study, in some instances increasing pressure even resulted in decreasing velocities. There are several possible explanations for this abnormal behavior, including the presence of gas, overconsolidation, or bimodal grain size distribution. The results indicate that an appropriate depth correction must be introduced into the published prediction equations in order to obtain reliable estimates of physical sediment properties for greater subsurface depths. 相似文献
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海上大直径钢管桩打桩过程中,桩周土体受到强烈扰动而发生强度弱化,掌握桩周土体强度弱化规律对于准确预测打桩过程、保证工程安全具有重要意义。为研究土体强度弱化规律,开展了环剪试验模拟打桩对桩周土体的扰动,测试土体强度随剪切速率的变化规律,建立了描述土体强度弱化规律的拟合公式,引入到打桩分析软件中。研究结果表明：土体的强度折减程度不仅与土体本身的性质有关还受到土体的埋深和剪切速率的影响,埋深越深土体强度折减程度越低,剪切速率越高土体强度折减越高,在打桩分析中可采用这里推荐的线性折减方法来模拟不同深度处土体强度的折减规律。 相似文献
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The advanced piston corer (APC) has been used by the Ocean Drilling Program since 1985 for recovering soft sediments from the ocean floor. The pullout force measured on extracting the core barrel from the sediment is shown to correlate with the average shear strength of the sediment core measured in the ship's laboratory. A simple rule of thumb is derived relating the shear strength of the sediment to the pullout force. Multiple APC holes at individual sites allow the consistency of the pullout measurements to be assessed. The effects of different operational procedures during APC coring are also explored. Although generally applicable, the correlation between pullout force and laboratory measurements of shear strength breaks down for some APC holes, possibly because of the disturbance of some sediment types during the APC coring process. A better understanding of the physical process of APC coring, and its effect on the properties of the sediment both inside and immediately outside the core barrel, would indicate what confidence can be put on the measurement of pullout force as a way of evaluating the in situ shear strength of deep sea sediments. 相似文献
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Shigehisa Nakamura 《Marine Geodesy》2000,23(1):55-61
Specific properties of the interannual sea level variations and annual tides in the Northwestern Pacific were studied. Several tide stations were monitored. The monthly mean sea level for the year of 1995 was analyzed at each tide station. A seismic event in 1995, some tectonic activity around the subject area, and the Kuroshio (the oceanic western boundary current) may possibly contaminate results which would have occurred from the astronomical annual tide alone. 相似文献
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《海洋学报(英文版)》2014,(11):161-F0003
<正>Acta Oceanologica Sinica(AOS)is a comprehensive academic journal edited by the Editorial Committee of Acta Oceanologica Sinica and is designed to provide a forum for important research papers of the marine scientific community which reflect the information on a worldwide basis.The journal publishes scholarly papers on marine science and technology,including physics,chemistry,biology, 相似文献