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东太平洋海隆深海热液区沉积物微生物多样性的研究 总被引：2，自引：1，他引：1
提取东太平洋海隆区深海热液系统沉积物样品的总DNA,构建沉积物中的细菌16S rDNA 克隆文库,通过PCR-RFLP分析与序列测定,对沉积物中的微生物类群及其与环境的关系进行了分析.结果表明,该海区沉积物中的36个克隆代表的22种基因型分别属于7个主要类群,其中变形菌(Proteobacteria)的γ-亚群为优势菌群,α-和β-亚群也均有分布;而硫氧化相关共生菌的属(sulfur-oxidizing symbionts)为优势种属.系统发育分析表明,在该沉积物中细菌主要是跟共生有关、跟C、S代谢相关,大多还能在无氧和高温环境的条件下生存,说明采样点具有典型的深海热液生态系统的特点,甲烷代谢和硫代谢在该区域的深海物质能量循环中占据着重要地位.另外大量新的极端微生物的存在,预示着该区域的微生物资源有着非常大的开发潜力. 相似文献
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《中国海洋大学学报(自然科学版)》2017,(6)
东太平洋结核区位于东北太平洋,在深海海底含有丰富的多金属结核,而微生物在多金属结核的形成过程中发挥着重要的作用。本研究通过DY29航次获得了该区域多个实验样品,包括结核、结核覆盖的沉积物、无结核覆盖的沉积物和底层海水,并对这些样品进行了细菌的分离培养和活性检测。结果表明,东太平洋结核区拥有丰富的微生物资源,共分离保藏细菌1 200株,其中402株细菌完成16SrRNA基因测序,分属于4个门,65个属和135个种。4个门分别为变形菌门(Proteobacteria,占81.59%)、放线菌门(Actinobacteria,占8.21%)、厚壁菌门(Firmicutes,占8.21%)和拟杆菌门(Bacteroidetes,占1.99%);优势属为盐单胞菌属(Halomonas)、假单胞菌属(Pseudomonas)、亚硫酸盐杆菌属(Sulfitobacter)等。两种沉积物样品中可培养放线菌门和厚壁菌门的细菌丰度较高,结核中分离得到的细菌包含较高比例的α-变形菌纲,4种样品类型中γ-变形菌纲的细菌均占最大比例。对结核样品分离得到的细菌进行酶学性质检测发现具有过氧化氢酶及酯酶(吐温20和吐温40)活性的菌株所占比例较高,并首次筛选出一些未报道的具有锰氧化能力的菌株。综合以上结果,东太平洋结核区不同样品的可培养细菌多样性较高,微生物资源丰富,而具有锰氧化能力菌株的分离鉴定对研究深海多金属结核的形成及深海矿产资源的开发都具有重要的意义。 相似文献
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印度洋深海热液区可培养细菌的分子鉴定与系统发育分析 总被引：1，自引：0，他引：1
采用MMJHS寡营养培养基从印度洋深海热液区沉积物和热液硫化物中分离获得16株细菌,通过16S rDNA序列比对和生理生化分析,对它们进行了鉴定并构建了系统发育树.结果表明,12株细菌属于γ-变型菌(γ-Gammaproteobacteria),其中6株属于盐单胞菌属(Halomonas),4株属于嗜冷杆菌属(Psychrobacter),2株属于食碱菌属(Alcanivorax);其余4株属于芽孢杆菌(Bacillus),其中1株为地衣芽孢杆菌(Bacillus licheniformis).分离获得的16株细菌中,4株为革兰氏阳性细菌,12株为革兰氏阴性细菌;H2S反应、吲哚测定反应、M.R和V-P均呈阴性.本研究为深入认识和开发利用深海热液区微生物资源奠定了基础. 相似文献
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北极深海沉积物中细菌和古菌群落结构研究 总被引：3，自引：0，他引：3
在北极深海沉积物生态系统中,微生物的群落结构由有机质输入、能量的可用性及其他环境因素决定.然而,全球气候变暖及其导致的冰盖提前融化正在影响微生物的多样性.为描述北极深海沉积物中的微生物群落结构及其与环境因素的相关性,我们利用罗氏454对北极深海沉积物样品的16S rDNA扩增子进行了测序,对细菌和古菌群落的丰富度、成分、结构及其系统发育分类地位进行了描述.硫还原和化能有机营养类是细菌群落中的主要类群;而古细菌群落主要是由微生物的关系最为密切的氨氧化奇古菌门(96.66%)和产甲烷古生菌界(3.21%).这项研究描述了北极极点附近深海沉积物(> 3500米)中的微生物多样性,将为以后研究类似环境中微生物代谢过程和途径等功能分析奠定基础. 相似文献
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藻际环境细菌和微藻间存在着独特的生态关系，它们可以通过转化和交换浮游植物分泌的有机质来影响其生理和代谢。尽管一些功能微生物在藻际环境的营养循环中具有重要作用，例如氮代谢，但是关于细菌群落与共生藻类如何响应环境中氮营养条件的改变目前并不十分清楚，其对于我们了解全球营养物质循环、藻华的形成以及生态系统功能至关重要。本文基于16S rRNA基因的高通量测序技术，分析了不同形态、不同浓度无机氮培养条件下三角褐指藻藻际环境中相关细菌群落的多样性和群落结构。系统发育分析结果表明，变形菌（Proteobacteria）和拟杆菌（Bacteroidetes）是所有样品中的优势菌，占序列总数的99.5%。同时发现，不同氮浓度培养条件下，细菌群落结构随微藻丰度的变化而改变。氮浓度及形态的变化对菌群结构的影响不显著。此外，γ-变形菌纲中三种细菌（Marinobacter；Algiphilus；Methylophaga）的相对丰度在氮限制培养条件下明显增加，它们可能在共生体系的氮转化过程中具有重要作用。 相似文献
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本文研究了3种抗生素联合处理黄海绿潮浒苔(Ulva prolifera)形态及共附生细菌多样性的影响。将浒苔放散的配子加入到含有3种广谱抗生素(青霉素G、硫酸新霉素、多黏菌素B)的培养液中进行培养, 与对照组相比, 发现浒苔幼苗生长速度缓慢, 且细胞变小, 藻体无法形成正常形态。进一步采用16S rDNA高通量测序分析抗生素处理藻体前后的共附生细菌多样性, 发现抗生素处理后浒苔共附生细菌丰富度和多样性降低, 其中Maribacter丰度降低。将藻体与形态发生化合物thallusin(Maribacter spp. 提取物)共培养, 发现thallusin可促进藻体形态恢复和生长, 推测抗生素可通过抑制Maribacter等细菌从而影响浒苔形态和生长, 这将为浒苔共附生细菌功能的深入研究奠定一定基础。 相似文献
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以采集后适应培养0~24 h以及添加甲烷和硫化钠培养24~240 h的南海冷泉区深海贻贝(Bathymodiolus platifrons)为材料,取其鳃部,分析附生菌的多样性与适应性变化状况。共分离鉴定出贻贝附生菌270株,对菌株的16S r DNA进行聚类分析,结果表明所分离菌株主要分布在4个门,21个属,其中变形菌的数量最多且多样性高。分析发现原位新采集的贻贝鳃部附生菌的多样性较高,6 h后附生菌的多样性明显降低。分别添加甲烷和硫化钠对深海贻贝进行培养,甲烷组与碳代谢有关的假单胞菌的数量逐渐增多,且在甲烷组240 h中发现2株食烷菌属菌株。硫化钠组的芽孢杆菌属所占比例升高。此外还发现4株潜在的新种。本研究实现了深海冷泉区贻贝的实验室培养,并对贻贝鳃部附生菌群结构进行了分析,丰富了海洋极端环境微生物资源库,并为深入解析贻贝与其附生菌之间的相互作用关系奠定了基础。 相似文献
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东太平洋深海沉积物中DNA的提取及细菌多样性初步分析 总被引：1，自引：0，他引：1
以东太平洋海隆附近深海柱状沉积物为材料，通过化学裂解和酶消化相结合的方法提取了沉积物微生物的总基因组DNA，并进行了纯化。结果表明所得到的DNA分子片段大小在21kb左右，纯化后的DNA可直接用于PCR等分子生物学操作。细菌16SrDNAV3可变区的PCR—DGGE图谱展示出15条以上条带，表明深海沉积物中细菌多样性较高，群落结构比较复杂。对其中9条主要条带进行回收、测序和系统发育分析，结果表明所获得的序列分属放线菌门（Actinobacteria），绿弯菌门（Chloroflexi），γ-变形细菌亚门（Gamma—proteobacteria），α-变形细菌亚门（Alpha—proteobacteria）和嗜酸菌门（Acidobacteria）5个大类群。 相似文献
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基于浒苔暴发海水池塘的微生物生态特征研究 总被引：3，自引：1，他引：2
为研究浒苔对海水养殖环境微生物生态的影响,采用Illumia高通量测序技术测定冬季垦区进水区、浒苔暴发的池塘和排水区水体以及底泥中菌群结构,分析进水区、池塘养殖区和排水区的环境微生物结构演变过程。结果表明:（1）γ-变形细菌、α-变形细菌、放线菌、拟杆菌和δ-变形细菌为海水养殖区的优势细菌门类;（2）进水区水体和底泥微生物种类和多样性指数均高于浒苔池塘和排水区;浒苔暴发的池塘和排水区微生物群落结构较为相似;（3）浒苔池塘的水体微生物以异养细菌为主,底泥以脱硫杆菌等厌氧细菌为主,增加了底泥潜在产生硫化氢的危害;（4）进水区水体含有丰度较高的弧菌和鱼立克次氏体等条件致病性病原菌,而浒苔池塘中含量较低,说明浒苔对弧菌等有一定的抑制作用;但浒苔暴发的池塘和排水区中另一种潜在致病菌黄杆菌类的丰度较高,养殖品种务必防患此类病菌感染疾病的发生。本文从微生态学角度全面揭示浒苔对近岸海区、海水池塘和排水区微生态演变过程的影响,发现了浒苔具有抑制和增加不同致病菌的双重作用,这对水产养殖有一定指导,也为浒苔发生原因、预报、预防等研究提供一定理论参考。 相似文献
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冰川土壤中的微生物是冰冻圈生态系统中的重要组成部分。南极纳尔逊冰川四周环海,临近海洋的物质输送和其他因素扰动改变了近岸土壤中部分理化因子,从而对土壤中的微生物群落产生影响。本研究采集了南极纳尔逊冰川不同近海距离处的土壤样品,并对其进行了细菌和古菌V4区扩增子测序以及宏基因组测序,探讨了不同近海距离的冰川土壤中的微生物群落结构和代谢潜能。物种多样性结果显示,不同位点的土壤微生物群落组成有所差异,但变形菌门、放线菌门、拟杆菌门等在冰川土壤样品中普遍存在且相对丰度较高。宏基因组分析结果显示,不同近海距离的冰川土壤微生物群落的功能基因分布不同,且能量代谢和跨膜运输等代谢途径的基因的丰度随着采样位点远离海洋而降低。冰川土壤中碳、氮、硫代谢分别以还原性柠檬酸循环、反硝化、同化硫酸盐还原途径为主,其中反硝化途径基因在所有样品中丰度较高。通过分箱组装获得了含有反硝化功能基因的基因组bin_71,并重构了其核心的代谢通路。本研究初步揭示了南极纳尔逊冰川土壤中微生物的群落结构及代谢潜能,为后续南极冰川土壤新物种的发现、功能基因的挖掘、以及探究全球气候变暖下海洋对沿海生态系统的影响提供了基础数据。 相似文献
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经济海藻繁育、养殖及综合利用是海洋农牧业及工业的重要组成部分。20世纪经过几代人的努力，我国在海带、紫菜、裙带菜及龙须菜的繁育、养殖关键技术等方面成功取得突破，为这些海藻的产业化提供坚实的保障，为我国成为世界海藻大国奠定了基础。海藻养殖产业为人们提供了食品、藻胶及其它丰富的产品，这包括保健品、功能食品、化妆品及药物等。海藻养殖产业也对人类经济、社会的发展起到重要作用，通过吸收环境中的二氧化碳、氮和磷，为海洋生态环境的改善发挥了重要作用。本文对我国海藻繁育、养殖及综合开发的历程进行简要回顾，对当前我国、中国科学院海洋研究海藻研究与应用进行了总结，对海藻研究发展的未来进行了展望；适应海藻产业从量向质的方向转变，同时兼顾生态环境效益，为我国海藻研发及应用提供参考。 相似文献
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为探究肿瘤易感基因101(简称TSG101)对斑节对虾(Penaeusmonodon)的免疫应答作用,了解在细菌刺激下斑节对虾的机体发生的变化机制,本研究以哈维弧菌(Vibrioharveyi)和金黄色葡萄球菌(Staphylococcusaureus)为实验组,以磷酸缓冲液(PBS)为对照组,通过荧光定量分析展开对斑节对虾对菌刺激的免疫应答作用。结果显示,斑节对虾的TSG101在各组织中均有表达,在肝胰腺中的表达量最高。在金黄色葡萄球菌刺激下,斑节对虾的TSG101在肝胰腺中的表达量与对照组相比呈极显著上调(P0.01),第12小时的TSG101 mRNA的表达量达到最大(为对照组的21.60倍);在鳃中的表达量与对照组相比呈极显著上调(P0.01),第6小时斑节对虾TSG101的表达量达到最大值(为对照组的3.64倍)。在注射哈维弧菌第9小时,肝胰腺中的PmTSG101 mRNA表达量极显著上调(P0.01)且达到最大(为对照组的2.50倍)。实验结果初步表明,斑节TSG101参与斑节对虾的先天免疫反应,在金黄色葡萄球菌和哈维弧菌的刺激的情况下,该基因RNA水平的表达情况发生明显变化。 相似文献
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Eight ophiuroid species, six from the northern Kattegat-eastern Skagerrak and three from the northern Adriatic Sea, were examined for regeneration of arms. The species were separated into groups based upon mode of feeding and habitat. Comparison between groups collected in the northern Kattegat-eastern Skagerrak showed that infaunal suspension- and deposit-feeding species (Amphiura filiformis and A. chiajei) had significantly more scars per arm (mean number 0.78) than epibenthic suspension feeders (Ophiothrix fragilis and Ophiocomina nigra, 0.29) or epibenthic carnivores and deposit feeders (Ophiura ophiura and O. albida, 0.13). Spatial variation in arm regeneration incidence was found between sampling sites in the northern Kattegat-eastern Skagerrak for Amphiura filiformis and in the northern Adriatic Sea for Ophiothrix quinquemaculata. The ash-free dry weight (AFDW) and nitrogen (N) contents were measured in arms of six species of brittle-stars from the northern Kattegat-eastern Skagerrak. Differences between species were found, with highest concentrations of AFDW and N in Amphiura filiformis, intermediate in A. chiajei, Ophiocomina nigra and Ophiothrix fragilis, and lowest in Ophiura ophiura and O. albida. As the infaunal suspension- and deposit-feeding brittle-stars (Amphiura spp.) had the highest proportions of damaged arms and highest AFDW and N contents in their arms in this comparison, it is suggested that selective cropping of arms by demersal fish is the main cause of arm damage on Amphiura spp. in this area. 相似文献
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向水体中添加不同浓度的短小芽孢杆菌CGMCC1004（Bacillus pumilus）和胶红酵母菌CGMCC1013（Rhodotorula mucilaginosa）以研究凡纳滨对虾（Litoenaeus vapznamei）体长、体质量、存活率、胃蛋白酶、肝胰腺淀粉酶和肝胰腺脂肪酶的影响，以及需钠弧菌（Vibrio natriegens）的感染效果。结果表明：向水体中添加10^4CFU／mL短小芽孢杆菌能提高对虾体长、存活率，但结果不显著，但对体质量增长率具有显著提高作用；水体中添加10^4CFU／mL短小芽孢杆菌对提高需钠弧菌感染后对虾成活率有一定的提高作用；水体中添加10^4CFU／mL短小芽孢杆菌能显著提高胃蛋白酶活性，但是对肝胰腺淀粉酶活性有一定抑制作用；添加复合菌剂比添加单一菌种的作用要好；亦证明了向水体中添加细菌的方式对凡纳滨对虾的体长、体质量、存活率以及水质指标影响比较小，但是对消化酶具有一定的提高作用。 相似文献
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Four species in the genus Navicula were isolated using the serial dilution method. Based on scanning electron microscopy(SEM) and sequence comparisons of two segments of genes(small ribosomal subunit and large subunit of Rubisco), the species were identified as Navicula perminuta, N. pseudacceptata, N. vara, and N. rhynchocephala. Based on phylogenetic analysis and culture trials, there was a close relationship between N. perminuta and N. vara. Growth of these species was evaluated using measurements of optical density at 680 nm(OD680) under various environmental factors. Results showed that the optimum culture conditions were 25℃, 50–100 μmol photons m-2 s-1, pH 8.0, and salinities from 25 to 30. However, the favorable salinity for N. perminuta was surprisingly high at 35. Nutrient requirement analysis demonstrated that growth of Navicula depended on the availability of SiO32-. Their relative growth rates(RGR) peaked at the highest tested level(0.25 mmol/L). The optimal concentrations of NO3- and PO43- were 3.6 mmol/L and 0.18 mmol/L, respectively. Culture of these Navicula species for abalone or sea cucumber aquaculture should take these factors into consideration. 相似文献
18.
The aim of the present study was to investigate seasonal and spatial patterns of soil oxygen consumption, nitrification, denitrification and fluxes of dissolved inorganic nitrogen (DIN) in a tidal salt marsh of the Lagoon of Venice, Italy. In the salt marsh, intact soil cores including overlying water were collected monthly at high tide from April to October in salt marsh creeks and in areas covered by the dominant vegetation, Limonium serotinum. In May, cores were also collected in areas with vegetation dominated by Juncus maritimus and Halimione portulacoides. In laboratory incubations at in situ temperature in the dark, flux rates of oxygen and DIN were monitored in the overlying water of the intact cores. 15N-nitrate was added to the overlying water and nitrification and denitrification were measured using isotope-dilution and -pairing techniques. The results show that highest soil oxygen consumption coincided with the highest water temperature in June and July. The highest denitrification rates were recorded in spring and autumn coinciding with the highest nitrate concentrations. Soil oxygen consumption and nitrification rates differed between sampling sites, but denitrification rates were similar among the different vegetation types. The highest rates were recorded in areas covered with L. serotinum. Burrowing soil macrofauna enhanced oxygen consumption, nitrification and denitrification in April and May. The data presented in this study indicate high temporal as well as spatial variations in the flux of oxygen and DIN, and nitrogen transformations in the tidal salt marshes of the Venice lagoon during the growth season. The results identify the salt marshes of the Venice lagoon as being metabolically very active ecosystems with a high capacity to process nitrogen. 相似文献
19.
In order to trace their feeding habits, stable carbon and nitrogen isotope ratios (delta15N and delta13C), as well as trace metal concentrations (Zn, Cd, Fe, Cu, Se and Hg) were analysed in the tissues of five commercial shark species from the Celtic Sea: the tope shark Galeorhinus galeus, the black-mouthed catshark Galeus melastomus, the starry smooth hound Mustelus asterias, the spiny dogfish Squalus acanthias and the lesser-spotted dogfish Scyliorhinus canicula. Our results were compared to previously described stomach contents and isotopic composition of potential preys. Isotopic ratio delta15N suggested that tope sharks fed at a higher trophic level (16.7 per thousand in the muscle) than the other species, reflecting its piscivorous diet. The lower values of spiny dogfish (11.6 per thousand in the muscle) might be explained, amongst other things, by either its migratory behaviour or its preference for preys from lower trophic levels. Cd and Hg were correlated with isotopic ratios delta13C and delta15N, and were shown to be diet-related whereas Zn, Fe and Cu seemed much more linked to species-specific metabolism. Although this multidisciplinary approach is revealed as a useful tool for the study of shark ecology, the lack of known trophic fractionation suggests that isotopic data be compared to traditional diet analyses. 相似文献
20.
Vertical and horizontal distribution of meiofauna in mangrove sediments in Transkei, southern Africa
The depth-distribution profiles of meiofauna in four transects in the Mngazana River, Transkei were studied during summer 1980. Highest densities [±1000(100 cm3)−1] were encountered within the top 10 cm of the sediment. Nematodes dominated (80%) and the remainder was made up of ciliates, oligochaetes, gastrotrichs, and low numbers of polychaetes, copepods, kinorhynchs and various crustacean larvae. Among chemical parameters Eh correlated most consistantly with distribution, particularly at the lower tidal levels. Temperature and pH appeared to be of lesser importance. The maximum estimated depth of penetration was on average 72 cm at the HW levels; 32 at MW and 23 at LW. The mean dry biomass was estimated at 1073 mg m−2; 941 mg m−2 and 196 mg m−2 at these tidal levels respectively. The importance of preliminary studies designed to estimate the depth distribution of meiofauna is discussed. 相似文献