Combining pixel and object based image analysis of ultra-high resolution multibeam bathymetry and backscatter for habitat mapping in shallow marine waters     

Daniel Ierodiaconou  Alexandre C. G. Schimel  David Kennedy  Jacquomo Monk  Grace Gaylard  Mary Young  Markus Diesing  Alex Rattray 《Marine Geophysical Researches》2018,39(1-2):271-288

Habitat mapping data are increasingly being recognised for their importance in underpinning marine spatial planning. The ability to collect ultra-high resolution (cm) multibeam echosounder (MBES) data in shallow waters has facilitated understanding of the fine-scale distribution of benthic habitats in these areas that are often prone to human disturbance. Developing quantitative and objective approaches to integrate MBES data with ground observations for predictive modelling is essential for ensuring repeatability and providing confidence measures for habitat mapping products. Whilst supervised classification approaches are becoming more common, users are often faced with a decision whether to implement a pixel based (PB) or an object based (OB) image analysis approach, with often limited understanding of the potential influence of that decision on final map products and relative importance of data inputs to patterns observed. In this study, we apply an ensemble learning approach capable of integrating PB and OB Image Analysis from ultra-high resolution MBES bathymetry and backscatter data for mapping benthic habitats in Refuge Cove, a temperate coastal embayment in south-east Australia. We demonstrate the relative importance of PB and OB seafloor derivatives for the five broad benthic habitats that dominate the site. We found that OB and PB approaches performed well with differences in classification accuracy but not discernible statistically. However, a model incorporating elements of both approaches proved to be significantly more accurate than OB or PB methods alone and demonstrate the benefits of using MBES bathymetry and backscatter combined for class discrimination.  相似文献   

Convergence analysis of fixed stress split iterative scheme for anisotropic poroelasticity with tensor Biot parameter     

Saumik Dana  Mary F. Wheeler 《Computational Geosciences》2018,22(5):1219-1230

We perform a convergence analysis of the fixed stress split iterative scheme for the Biot system modeling coupled flow and deformation in anisotropic poroelastic media with tensor Biot parameter. The fixed stress split iterative scheme solves the flow subproblem with all components of the stress tensor frozen using a multipoint flux mixed finite element method, followed by the poromechanics subproblem using a conforming Galerkin method in every coupling iteration at each time step. The coupling iterations are repeated until convergence and Backward Euler is employed for time marching. The convergence analysis is based on studying the equations satisfied by the difference of iterates to show that the fixed stress split iterative scheme for anisotropic poroelasticity with Biot tensor is contractive. We also demonstrate that the scheme is numerically convergent using the classical Mandel’s problem solution for transverse isotropy.  相似文献   

Tidal Habitats Support Large Numbers of Invasive Blue Catfish in a Chesapeake Bay Subestuary     

Mary C. Fabrizio  Troy D. Tuckey  Robert J. Latour  Gary C. White  Alicia J. Norris 《Estuaries and Coasts》2018,41(3):827-840

The introduction of a non-native freshwater fish, blue catfish Ictalurus furcatus, in tributaries of Chesapeake Bay resulted in the establishment of fisheries and in the expansion of the population into brackish habitats. Blue catfish are an invasive species in the Chesapeake Bay region, and efforts are underway to limit their impacts on native communities. Key characteristics of the population (population size, survival rates) are unknown, but such knowledge is useful in understanding the impact of blue catfish in estuarine systems. We estimated population size and survival rates of blue catfish in tidal habitats of the James River subestuary. We tagged 34,252 blue catfish during July–August 2012 and 2013; information from live recaptures (n = 1177) and dead recoveries (n = 279) were used to estimate annual survival rates and population size using Barker’s Model in a Robust Design and allowing for heterogeneity in detection probabilities. The blue catfish population in the 12-km study area was estimated to be 1.6 million fish in 2013 (95% confidence interval [CI] adjusted for overdispersion: 926,307–2,914,208 fish). Annual apparent survival rate estimates were low: 0.16 (95% CI 0.10–0.24) in 2012–2013 and 0.44 (95% CI 0.31–0.58) in 2013–2014 and represent losses from the population through mortality, permanent emigration, or both. The tagged fish included individuals that were large enough to exhibit piscivory and represented size classes that are likely to colonize estuarine habitats. The large population size that we estimated was unexpected for a freshwater fish in tidal habitats and highlights the need to effectively manage such species.  相似文献   

Performance studies of the fixed stress split algorithm for immiscible two-phase flow coupled with linear poromechanics     

Dana  Saumik  Jammoul  Mohamad  Wheeler  Mary F. 《Computational Geosciences》2022,26(1):13-27

In this work, we measure the performance of the fixed stress split algorithm for the immiscible water-oil flow coupled with linear poromechanics. The two-phase flow equations are solved on general hexahedral elements using the multipoint flux mixed finite element method whereas the poromechanics equations are discretized using the conforming Galerkin method. We introduce a rigorous calculation of the update in poroelastic properties during the iterative solution of the coupled system equations. The effects of the coupling parameter on the performance of the fixed stress algorithm is demonstrated in two field studies: the Frio oil reservoir and the Cranfield injection site.

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Laser Ablation (U-Th-Sm)/He Dating of Zircons: Analytical Age Bias and its Consequence for Studying Detrital Zircon Populations     

Julien Léger  Raphaël Pik  Bouchaïb Tibari  Sébastien Ternois  Mary Ford  Chantal Peiffert  Julien Mercadier 《Geostandards and Geoanalytical Research》2023,47(2):219-242

The in situ (U-Th-Sm)/He and U/Pb laser-ablation double-dating procedure is a valuable method that can provide a large dataset relatively efficiently in contrast with conventional bulk helium thermochronometry. In this study, we evaluate the potential age error associated with the double ablation procedure and report the in situ (U-Th-Sm)/He double-ablation dating of 249 zircons from the Fish Canyon Tuff locality. With LA-ICP-MS pseudo-depth profiling and 3D numerical modelling, we show that the concentric double-ablation procedure in minerals with U-Th-Sm zoning can generate a significant (U-Th-Sm)/He age error (positive or negative), resulting in over-scattering and/or an offset of the mean age. Pseudo-depth profiling is insufficient to predict the individual age error, partly because of the superimposed ablations. To evaluate the consequence of this inherent bias, we confront a synthetic age distribution to the error expected for U-Th-Sm zoned zircons analysed with double-ablation (U-Th-Sm)/He thermochronometry. As expected, a strong age bias causes the spreading of peak ages, downgrading the original signal. Yet, the throughput of the ablation-based method can allow intra- and inter-sample peak age identification and comparison, and the coupling of (U-Th-Sm)/He and U/Pb ages extends our ability to deconvolute a multimodal age spectrum.  相似文献   

A critical evaluation of multi‐proxy dendroclimatology in northern Finland     

Danny McCarroll  Mervi Tuovinen  Rochelle Campbell  Mary Gagen  Håkan Grudd  Risto Jalkanen  Neil J. Loader  Iain Robertson 《第四纪科学杂志》2011,26(1):7-14

Twentieth‐century summer (July–August) temperatures in northern Finland are reconstructed using ring widths, maximum density and stable carbon isotope ratios (δ¹³C) of Scots pine tree rings, and using combinations of these proxies. Verification is based on the coefficient of determination (r²), reduction of error (RE) and coefficient of efficiency (CE) statistics. Of the individual proxies, δ¹³C performs best, followed by maximum density. Combining δ¹³C and maximum density strengthens the climate signal but adding ring widths leads to little improvement. Blue intensity, an inexpensive alternative to X‐ray densitometry, is shown to perform similarly. Multi‐proxy reconstruction of summer temperatures from a single site produces strong correlations with gridded climate data over most of northern Fennoscandia. Since relatively few trees are required (<15) the approach could be applied to long sub‐fossil chronologies where replication may be episodically low. Copyright © 2010 John Wiley & Sons, Ltd.  相似文献   

The Fernow Experimental Forest,West Virginia,USA: Insights,datasets, and opportunities     

Luis Andrés Guillén  Mary Beth Adams  Emily Elliot  Jason Hubbart  Charlene Kelly  Brenden McNeil  William Peterjohn  Nicolas Zegre 《水文研究》2021,35(4):e14106

Long-term experimental watershed studies have significantly influenced our global understanding of hydrological processes. The discovery and characterization of how stream water quantity and quality respond to a changing environment (e.g. land-use change, acidic deposition) has only been possible due to the establishment of catchments devoted to long-term study. One such catchment is the Fernow Experimental Forest (FEF) located in the headwaters of the Appalachian Mountains in West Virginia, a region that provides essential freshwater ecosystem services to eastern and mid-western United States communities. Established in 1934, the FEF is among the earliest experimental watershed studies in the Eastern United States that continues to address emergent challenges to forest ecosystems, including climate change and other threats to forest health. This data note describes available data and presents some findings from more than 50 years of hydrologic research at the FEF. During the first few decades, research at the FEF focused on the relationship between forest management and hydrological processes—especially those related to the overall water balance. Later, research included the examination of interactions between hydrology and soil erosion, biogeochemistry, N-saturation, and acid deposition. Hydro-climatologic and water quality datasets from long-term measurements and data from short-duration studies are publicly available to provide new insights and foster collaborations that will continue to advance our understanding of hydrology in forested headwater catchments. As a result of its rich history of research and abundance of long-term data, the FEF is positioned to continue to advance understanding of forest ecosystems in a time of unprecedented change.  相似文献   

Clitellate worms (Annelida) in lateglacial and Holocene sedimentary DNA records from the Polar Urals and northern Norway     

Youri Lammers  Charlotte L. Clarke  Christer Ersus  Antony G. Brown  Mary E. Edwards  Ludovic Gielly  Haflidi Haflidason  Jan Mangerud  Emilia Rota  John Inge Svendsen  Inger Greve Alsos 《Boreas: An International Journal of Quaternary Research》2019,48(2):317-329

While there are extensive macro‐ and microfossil records of a range of plants and animals from the Quaternary, earthworms and their close relatives amongst annelids are not preserved as fossils and therefore the knowledge of their past distributions is limited. This lack of fossils means that clitellate worms (Annelida) are currently underused in palaeoecological research, even though they can provide valuable information about terrestrial and aquatic environmental conditions. Their DNA might be preserved in sediments, which offers an alternative method for detection. Here we analyse lacustrine sediments from lakes in the Polar Urals, Arctic Russia, covering the period 24 000–1300 cal. a BP, and NE Norway, covering 10 700–3300 cal. a BP, using a universal mammal 16S rDNA marker. While mammals were recorded using the marker (reindeer was detected twice in the Polar Urals core at 23 000 and 14 000 cal. a BP, and four times in the Norwegian core at 11 000 cal. a BP and between 3600–3300 cal. a BP), worm extracellular DNA ‘bycatch’ was rather high. In this paper we present the first reported worm detection from ancient DNA. Our results demonstrate that both aquatic and terrestrial clitellates can be identified in late‐Quaternary lacustrine sediments, and the ecological information retrievable from this group warrants further research with a more targeted approach.  相似文献   

Rethinking the PhD in geography: overview and introduction     

Mark Boyle  Kenneth E. Foote  Mary Gilmartin 《GeoJournal》2015,80(2):159-168

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A tree‐ring width based drought reconstruction for southeastern China: links to Pacific Ocean climate variability          下载免费PDF全文

Feng Chen  Shulong Yu  Yujiang Yuan  Huiqin Wang  Mary Gagen 《Boreas: An International Journal of Quaternary Research》2016,45(2):335-346

We present a drought reconstruction for southeastern China based on a tree‐ring width chronology of Cryptomeria fortunei developed from two sampling sites in central Fujian. A reconstruction of July–February drought variability, spanning AD 1855–2011, was developed by calibrating total tree‐ring width data with the self‐calibrating Palmer drought severity index (scPDSI). The reconstruction was verified against an independent data set, and accounts for 36% of the actual scPDSI variance during the period 1955–2011. Relatively dry intervals were reconstructed between AD 1859–1880, 1899–1911, 1927–1933, 1946–1959, 1964–1970 and 1987–1997. Relatively wet conditions prevailed during 1855–1858, 1881–1898, 1912–1926, 1934–1945, 1960–1963, 1971–1986 and 1998–2011. Comparisons between our scPDSI reconstruction and a moisture‐sensitive tree‐ring width record from Vietnam revealed consistencies between the two data sets, suggesting similar drought regimes. Spectral peaks of 2.2–6.4 years may be indicative of El Niño‐Southern Oscillation (ENSO) activity, as also suggested by the significant correlations with sea surface temperatures (SSTs) in the eastern equatorial and southeastern Pacific Ocean and an extreme event analysis. The analysis of links between our scPDSI reconstruction and the large‐scale regional climatic variation shows that there is a relationship between regional drought variation and East Asian summer monsoon (EASM) intensity.  相似文献