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简要介绍和评述了预测ＲＮＡ折叠结构（主要是ＲＮＡ二级结构）的理论方法,对以ＲＮＡ二级结构为基础的ＲＮＡ三级结构的构建方法和分子力学进行了初步探索和研究。真核细胞前体ｍＲＮＡ中内含子的剪接过程涉及剪接位点（内含子的５′、３′剪接位点和分枝点）的核苷序列与一些小蛋白质分子之间特定的专一相互作用。对大量内含子、外显子－内含子－外显子以及外显子－外显子的核苷酸片段二级结构的分析表明,剪接位点大多位于二级结构的环区。剪接位点的这种结构分布特征与剪接过程的化学反应机制相符合,并可以作为识别剪接位点的一种结构信号。对ｍＲＮＡ和由其编码的蛋白质折叠结构进行比较研究后发现,两者之间存在着相关性：两者的二级结构单元（即ｍＲＮＡ二级结构的发夹,蛋白质中α－螺旋和β－折叠片）数基本上相同;蛋白质转角区域与ｍＲＮＡ二级结构的环区对应;两者的结构元素在空间上的排布相一致等。详细分析密码子在ｍＲＮＡ二级结构中的分布还发现,密码子在ＲＮＡ二级结构中的分布规律与氨基酸的构象性质有一定联系。这些结果提示,ｍＲＮＡ与蛋白质之间除了存在一维线性遗传关系外,很可能还存在着某种三维结构的遗传关系 相似文献
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An evaluation of metal bioaccessibility in estuarine sediments using the commercially available protein, bovine serum albumin 总被引：2，自引：0，他引：2
The bioaccessibility of metals (Al, Ca, Fe, Mn, Ag, Cd, Co, Cu, Ni, Pb, Sn, Zn) in oxic estuarine sediments has been evaluated using solutions of a commercially available protein (bovine serum albumin; BSA) that mimic the chemical conditions encountered in the gut environment of many deposit-feeding organisms. Over a 20 h incubation period with 5 g L− 1 BSA, metal mobilisation was generally biphasic in that a relatively short period of rapid release was succeeded by more gradual release or approach to equilibrium, although in some cases metal readsorption was evident during the time-courses. Availability to BSA, defined as metal released after 20 h relative to metal extracted by boiling aqua regia, was greatest for Cd, Ni, Ca and Zn and lowest for Fe and Mn, and correlated well with, but was an order of magnitude lower than, metal digested by acidified hydrogen peroxide. Time-courses conducted in the absence of the protein revealed that significant quantities of Ca and Mn were water-soluble, reflecting the partial dissolution of carbonates and hydrous Mn oxides, respectively. Additional experiments indicated a net increase in metal release with increasing BSA concentration and, with the exception of Ca and Mn, a substantial increase in metal mobilisation after sediment organic matter had been digested by peroxidation. These observations suggest that, apart from Ca and Mn, metal release proceeds via complexation with component amino acids of the protein, denudation of organic host phases, and exposure of inorganic, metal-bearing minerals. Accordingly, the bioaccessibility of a metal is predicted to be dependent on its (i) affinity for proteinaceous ligands, (ii) association with components of digestible sediment organic matter, and (iii) degree of binding at relatively weak sites on sediment phases that are exposed or modified by the action of proteins and other chemical constituents of the gut environment. 相似文献
3.
随着DNA序列测定技术的飞速发展，人们可以在很短的时间内获得某种生物基因组的全序列。生物体的生命活动主要依赖于基因组的产物——蛋白质组，但是蛋白质组的研究相对于基因组来说却要复杂得多。蛋白质组技术是在细胞内整体蛋白质水平上进行研究，从蛋白质整体活动的角度来研究生命活动的规律。综述了蛋白质组和蛋白质组学出现的背景、起源、概念、研究技术、研究内容、面对的挑战、开展该项研究的意义、陆生动植物和微生物蛋白质组学的研究进展及海洋生物蛋白质组学的研究概况。目前，普通生物方面的蛋白质组工作开展得较多，海洋生物方面却相对滞后。种种迹象表明，开展海洋生物蛋白质组学研究，对揭示生命的奥秘、促进海洋资源的开发都有重大的推动作用。 相似文献
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以酪蛋白和明胶为蛋白源 ,添加豆油、鱼油、糊精、纤维素以及适量的维生素和矿物质混合剂配制试验饲料 ,饲料配成5个蛋白质水平 ,每个蛋白水平分别包括5个能量级 ,以体质量增长倍数、蛋白质效率和饲料系数为评判依据 ,对体质量为8.73g±0.79g的中华鲟(Acipensersinensis)的适宜蛋白质含量及其蛋白能量比进行了研究。经过为期8周的试验 ,结果表明 :中华鲟幼鲟配合饲料中的适宜蛋白质含量范围为35.7%～41.8% ,饲料的最佳蛋白能量比范围为21.85～30.05ng/J。当试验饲料蛋白质含量为40.3% ,蛋白能量比为27.85ng/J时 ,试验鲟鱼获得最大体质量增长倍数为11.60±1.20,最低的饲料系数为1.68±0.23,以及最高的蛋白质效率为1.58%±0.14%。 相似文献
5.
Nassef M Tawaratsumita T Oba Y Satone H Nakayama K Shimasaki Y Honjo T Oshima Y 《Marine pollution bulletin》2011,62(2):412-414
In this study, individual Japanese flounder were intraperitoneally injected with 2 μg tributyltin-d27 (TBT-d27) fish−1. Blood samples were collected on day 7 after injection. TBT-binding protein types 1 and 2 (TBT-bp1, -bp2) in the blood serum were quantified by western blotting analysis. As a result, the concentration of TBT-bp2 in TBT-d27 treated group increased to 220% of that in the solvent control, whereas the TBT-bp1 concentration decreased to 65% of that in the solvent control. Additionally, a positive relationship between the concentrations of TBT-bp2 and TBT was observed in blood sera of wild and cultured flounder. We suggest that TBT-bp2 is produced in response to TBT exposure and may play an important role in fish physiology. 相似文献
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The contribution of terrigenous organic matter (TOM) to high molecular weight dissolved and particulate organic matter (POM) was examined along the salinity gradient of the Delaware Estuary. Dissolved organic matter (DOM) was fractionated by ultrafiltration into 1–30 kDa (HDOM) and 30 kDa–0.2 μm (VHDOM) nominal molecular weight fractions. Thermochemolysis with tetramethylammonium hydroxide (TMAH) was used to release and quantify lipids and lignin phenols. Stable carbon isotopes, fatty acids and lignin content indicated shifts in sources with terrigenous material in the river and turbid region and a predominantly algal/planktonic signal in the lower estuary and coastal ocean. Thermochemolysis with TMAH released significant amounts of short chain fatty acids (C9–C13), not seen by traditional alkaline hydrolysis, which appear to be associated with the macromolecular matrix. Lignin phenol distributions in HDOM, VHDOM and particles followed predicted sources with higher concentrations in the river and turbid region of the estuary and lower concentrations in the coastal ocean. TOM comprised 12% of HDOM within the coastal ocean and up to 73% of HDOM within the turbid region of the estuary. In the coastal ocean, TOM from high molecular weight DOM comprised 4% of total DOC. The annual flux of TOM from the Delaware Estuary to the coastal ocean was estimated at 2.0×1010 g OC year−1 and suggests that temperate estuaries such as Delaware Bay can be significant sources of TOM on a regional scale. 相似文献
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采用基因工程的方法，进行重组质粒HF443一EGFP的构建和在哺乳动物细胞中的表达，并进行了其用于赤潮毒素检测的可能性研究。结果表明，用PCR技术扩增EGFP基因，用XbaⅠ、Hind Ⅲ双酶切并纯化，与同样双酶切并纯化的HF443质粒连接，可构建重组质粒HF443-EGFP；利用Lipofect AMINE2000转染体外培养哺乳动物BIU-87细胞。在培养体系中加入不同浓度的GTX，而后加入Na^ 通道激活剂乌头碱以诱导绿色荧光蛋白表达，荧光显微镜下观察细胞中绿色荧光蛋白表达的变化情况。细胞发出的荧光随毒素浓度的增加而减弱，存在一定的剂量效应关系，提示毒素GTX可显著影响绿色荧光蛋白的表达，重组质粒：HF443-EGFP用于赤潮霉素检测有一定的可行性. 相似文献
9.
Comparative proteome analysis of butachlor-degrading bacteria 总被引：1，自引：0，他引：1
A Pseudomonas putida strain, named ER1, was isolated from an agricultural soil and found to actively degrade the herbicide butachlor. The enzyme
extracted from ER1 could degrade butachlor. Furthermore, incubation of ER1 in a medium containing 50 mg/kg of butachlor after
3 days resulted in the high butachlor-degrading enzyme activity of ER1. Response of ER1 to butachlor might be related to changes
in protein composition at both quantitative and qualitative levels. Total proteins were extracted from control strain (incubated
in the medium without butachlor) and the treated strain (incubated in the medium with butachlor). The proteins were separated
by two-dimensional gel electrophoresis. Of the total number of ER1 protein, 11 spots were significantly changed under butachlor
stress. Analysis by matrix-assisted laser desorption/ionization mass spectrometry and tandem mass spectrometry coupled with
database searching allowed the function of some proteins which were similar to the hydrolases activity or oxidoreductase activity. 相似文献
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大鼠肝脏经匀浆、硫酸铵盐析和DEAE-纤维素柱层析,得到部分纯化的Ⅰ型和Ⅱ型蛋白激酶A。将两型酶制剂在体外分别与藻酸双酯钠孵育,藻酸双酯钠对两型酶的活性均有剂量依赖性抑制作用。 相似文献